BLASTX nr result

ID: Forsythia23_contig00045305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00045305
         (406 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KEH38424.1| F-box/LRR protein [Medicago truncatula]                 69   1e-09
ref|XP_006293285.1| hypothetical protein CARUB_v10019621mg [Caps...    64   4e-08
ref|XP_010498034.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    62   1e-07
gb|AES58928.2| F-box/RNI/FBD-like domain protein [Medicago trunc...    62   1e-07
ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    62   1e-07
ref|XP_012462941.1| PREDICTED: putative F-box protein At1g67390 ...    62   1e-07
ref|XP_010512109.1| PREDICTED: F-box/LRR-repeat protein At3g5893...    62   2e-07
emb|CDX70846.1| BnaC03g09300D [Brassica napus]                         61   3e-07
emb|CDX70845.1| BnaC03g09290D [Brassica napus]                         61   3e-07
ref|XP_009358143.1| PREDICTED: F-box protein At3g62230-like [Pyr...    60   4e-07
ref|XP_009145882.1| PREDICTED: F-box protein At1g80960-like [Bra...    60   4e-07
emb|CDX92244.1| BnaA05g21630D [Brassica napus]                         60   4e-07
ref|XP_007022105.1| F-box and Leucine Rich Repeat domains contai...    60   4e-07
emb|CAB86926.1| putative protein [Arabidopsis thaliana]                60   4e-07
ref|XP_009342602.1| PREDICTED: F-box protein At3g62230-like [Pyr...    60   6e-07
ref|XP_006398141.1| hypothetical protein EUTSA_v10001182mg, part...    60   6e-07
ref|XP_010504857.1| PREDICTED: F-box/LRR-repeat protein At3g5893...    60   7e-07
ref|XP_010512120.1| PREDICTED: F-box/LRR-repeat protein At3g5893...    59   1e-06
ref|XP_006290714.1| hypothetical protein CARUB_v10016812mg [Caps...    59   1e-06
ref|XP_012572960.1| PREDICTED: putative F-box protein At1g67390 ...    58   2e-06

>gb|KEH38424.1| F-box/LRR protein [Medicago truncatula]
          Length = 353

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 31/64 (48%), Positives = 46/64 (71%)
 Frame = -2

Query: 219 GSSSMIVKQELDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFNLIR 40
           G+   ++++E D ISNLP+ +   IISPLP  E+VRTS+LSK W+  WKH P+L+F+  +
Sbjct: 6   GTQIRVMEEEEDLISNLPDALLANIISPLPYMEVVRTSVLSKRWESLWKHTPSLNFDQRQ 65

Query: 39  MTKA 28
           M K+
Sbjct: 66  MLKS 69


>ref|XP_006293285.1| hypothetical protein CARUB_v10019621mg [Capsella rubella]
           gi|482561992|gb|EOA26183.1| hypothetical protein
           CARUB_v10019621mg [Capsella rubella]
          Length = 483

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 27/47 (57%), Positives = 35/47 (74%)
 Frame = -2

Query: 189 LDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFN 49
           +D ISNLP+ +RC I+S LP  ++  TS+LSKSW + WK VPNLD N
Sbjct: 1   MDRISNLPDDVRCHILSFLPTKQVAMTSVLSKSWLNLWKRVPNLDIN 47


>ref|XP_010498034.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g16930-like isoform X2
           [Camelina sativa]
          Length = 450

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
 Frame = -2

Query: 219 GSSSMIVKQE--LDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFN 49
           G +S+  KQ    D ISNLP+P+ CQI+S L   E VRTS+LSK W++ W HVP LD +
Sbjct: 3   GETSIKEKQRNSSDRISNLPDPLLCQILSDLSTKESVRTSVLSKRWRNLWLHVPALDLD 61


>gb|AES58928.2| F-box/RNI/FBD-like domain protein [Medicago truncatula]
          Length = 649

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 37/103 (35%), Positives = 58/103 (56%)
 Frame = -2

Query: 357 VTLLNRFISFVFESHANSSNYTPPFTKTRENPNLKEIRPRI*CLKMGSSSMIVKQELDHI 178
           + L++ ++S  F      S     F   R +PNLKE++     L   S  +++ +E D I
Sbjct: 261 INLMSLWLSINFNELKEISTALSVF---RSSPNLKELKIFAGKLSESSCLIMIDEEPDRI 317

Query: 177 SNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFN 49
           S LP  +  +I+S LPI ++VRTSILS  W++ W  +PNL F+
Sbjct: 318 SVLPGDVIDRILSCLPIRDVVRTSILSNKWRYKWITIPNLVFD 360


>ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
          Length = 657

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 37/103 (35%), Positives = 58/103 (56%)
 Frame = -2

Query: 357 VTLLNRFISFVFESHANSSNYTPPFTKTRENPNLKEIRPRI*CLKMGSSSMIVKQELDHI 178
           + L++ ++S  F      S     F   R +PNLKE++     L   S  +++ +E D I
Sbjct: 269 INLMSLWLSINFNELKEISTALSVF---RSSPNLKELKIFAGKLSESSCLIMIDEEPDRI 325

Query: 177 SNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFN 49
           S LP  +  +I+S LPI ++VRTSILS  W++ W  +PNL F+
Sbjct: 326 SVLPGDVIDRILSCLPIRDVVRTSILSNKWRYKWITIPNLVFD 368


>ref|XP_012462941.1| PREDICTED: putative F-box protein At1g67390 [Gossypium raimondii]
           gi|763815255|gb|KJB82107.1| hypothetical protein
           B456_013G176400 [Gossypium raimondii]
          Length = 527

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/57 (49%), Positives = 41/57 (71%)
 Frame = -2

Query: 186 DHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFNLIRMTKACREL 16
           D IS LP+ +  +IIS LP+D++VRTS+LS+ W   W++VP LDF+  RM K  ++L
Sbjct: 16  DLISKLPDSLLREIISHLPVDDVVRTSVLSRRWSGLWRYVPRLDFDPKRMMKPSKQL 72


>ref|XP_010512109.1| PREDICTED: F-box/LRR-repeat protein At3g58930-like [Camelina
           sativa] gi|727460560|ref|XP_010512110.1| PREDICTED:
           F-box/LRR-repeat protein At3g58930-like [Camelina
           sativa]
          Length = 488

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = -2

Query: 189 LDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFN 49
           +D ISNLP+ IRC I S LP  +   TS+LSKSWQ+ WK VPNLD +
Sbjct: 1   MDRISNLPDEIRCHIFSFLPTKQAAVTSVLSKSWQNLWKLVPNLDID 47


>emb|CDX70846.1| BnaC03g09300D [Brassica napus]
          Length = 1050

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 27/60 (45%), Positives = 42/60 (70%)
 Frame = -2

Query: 228 LKMGSSSMIVKQELDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFN 49
           ++ G   +++++E D IS+LP+P+ C I+S L IDE V TS+LS  W+H WK VP L+ +
Sbjct: 19  VRQGEERVVIREE-DMISSLPDPLLCHILSFLTIDEAVWTSVLSSRWRHLWKWVPRLELD 77


>emb|CDX70845.1| BnaC03g09290D [Brassica napus]
          Length = 495

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 27/60 (45%), Positives = 42/60 (70%)
 Frame = -2

Query: 228 LKMGSSSMIVKQELDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFN 49
           ++ G   +++++E D IS+LP+P+ C I+S L IDE V TS+LS  W+H WK VP L+ +
Sbjct: 28  VREGEERVVIREE-DRISSLPDPLLCHILSFLTIDEAVWTSVLSSRWRHLWKWVPRLELD 86


>ref|XP_009358143.1| PREDICTED: F-box protein At3g62230-like [Pyrus x bretschneideri]
          Length = 457

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 25/47 (53%), Positives = 32/47 (68%)
 Frame = -2

Query: 189 LDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFN 49
           +D +SNLP+P+   I+S LP  E  +TS LSK W+H WK   NLDFN
Sbjct: 1   MDRLSNLPDPLLSHILSSLPFKEAAKTSSLSKQWRHQWKSTRNLDFN 47


>ref|XP_009145882.1| PREDICTED: F-box protein At1g80960-like [Brassica rapa]
          Length = 445

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 27/70 (38%), Positives = 44/70 (62%)
 Frame = -2

Query: 222 MGSSSMIVKQELDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFNLI 43
           M  SS     ++D ISNLP+ +   I+S L  +E VRTS++SK W+H WKH+P+L  ++ 
Sbjct: 1   MERSSSDQVNDVDWISNLPDDVLLVILSRLSTEEAVRTSVMSKRWEHVWKHIPHLILDMT 60

Query: 42  RMTKACRELF 13
           R+  +   ++
Sbjct: 61  RIVNSKEPIY 70


>emb|CDX92244.1| BnaA05g21630D [Brassica napus]
          Length = 379

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 27/70 (38%), Positives = 44/70 (62%)
 Frame = -2

Query: 222 MGSSSMIVKQELDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFNLI 43
           M  SS     ++D ISNLP+ +   I+S L  +E VRTS++SK W+H WKH+P+L  ++ 
Sbjct: 21  MERSSSDQVNDVDWISNLPDDVLLVILSRLSTEEAVRTSVMSKRWEHVWKHIPHLILDMT 80

Query: 42  RMTKACRELF 13
           R+  +   ++
Sbjct: 81  RIVNSKEPIY 90


>ref|XP_007022105.1| F-box and Leucine Rich Repeat domains containing protein [Theobroma
           cacao] gi|508721733|gb|EOY13630.1| F-box and Leucine
           Rich Repeat domains containing protein [Theobroma cacao]
          Length = 511

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
 Frame = -2

Query: 213 SSMIVKQEL---DHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFNLI 43
           +S  VK+E    D IS LP+ +  +I+S LP+DE VRTSILS+ W+  W++V  LDF+  
Sbjct: 2   TSNFVKEEPYGPDLISRLPDTLLSEIVSQLPVDEAVRTSILSRRWKSLWRYVSRLDFDPN 61

Query: 42  RMTKACREL 16
           RM K  + +
Sbjct: 62  RMMKPSKRI 70


>emb|CAB86926.1| putative protein [Arabidopsis thaliana]
          Length = 977

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 27/49 (55%), Positives = 35/49 (71%)
 Frame = -2

Query: 195 QELDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFN 49
           Q++D +SNLPE +RC I+S LP      TS+LSKSW + WK VPNLD +
Sbjct: 605 QKVDLVSNLPEEVRCHILSFLPTKHAALTSVLSKSWLNLWKLVPNLDID 653


>ref|XP_009342602.1| PREDICTED: F-box protein At3g62230-like [Pyrus x bretschneideri]
          Length = 457

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 25/47 (53%), Positives = 32/47 (68%)
 Frame = -2

Query: 189 LDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFN 49
           +D +SNLP+P+   I+S LP  E  +TS LSK W+H WK   NLDFN
Sbjct: 1   MDRLSNLPDPLLSYILSSLPFKEAAKTSSLSKQWRHQWKSTRNLDFN 47


>ref|XP_006398141.1| hypothetical protein EUTSA_v10001182mg, partial [Eutrema
           salsugineum] gi|557099230|gb|ESQ39594.1| hypothetical
           protein EUTSA_v10001182mg, partial [Eutrema salsugineum]
          Length = 387

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 28/58 (48%), Positives = 41/58 (70%)
 Frame = -2

Query: 186 DHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFNLIRMTKACRELF 13
           D IS LP+P+  QI+S LPI + V+T +LSK W+  W +V +LDFN+  ++K  R+LF
Sbjct: 4   DRISELPDPLLYQILSYLPIIDSVKTGVLSKRWEFLWLNVSSLDFNVRDISKPYRKLF 61


>ref|XP_010504857.1| PREDICTED: F-box/LRR-repeat protein At3g58930-like [Camelina
           sativa] gi|727446574|ref|XP_010504858.1| PREDICTED:
           F-box/LRR-repeat protein At3g58930-like [Camelina
           sativa]
          Length = 488

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 27/47 (57%), Positives = 34/47 (72%)
 Frame = -2

Query: 189 LDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFN 49
           +D ISNLP+ IRC I+S LP  +   TS LSKSW++ WK VPNLD +
Sbjct: 1   MDRISNLPDEIRCHILSFLPTKQAALTSALSKSWRNLWKLVPNLDID 47


>ref|XP_010512120.1| PREDICTED: F-box/LRR-repeat protein At3g58930-like [Camelina
           sativa] gi|727460580|ref|XP_010512121.1| PREDICTED:
           F-box/LRR-repeat protein At3g58930-like [Camelina
           sativa]
          Length = 489

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = -2

Query: 189 LDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFN 49
           +D +SNLP+ IRC I+S LP  +   TS LSKSW++ WK VPNLD +
Sbjct: 1   MDRVSNLPDEIRCHILSFLPTKQAALTSALSKSWRNLWKLVPNLDID 47


>ref|XP_006290714.1| hypothetical protein CARUB_v10016812mg [Capsella rubella]
           gi|482559421|gb|EOA23612.1| hypothetical protein
           CARUB_v10016812mg [Capsella rubella]
          Length = 651

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = -2

Query: 189 LDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFN 49
           +D +SNLP+ IRC I+S LP      TS+LSKSW++ WK +PNLD +
Sbjct: 1   MDRVSNLPDEIRCHILSFLPTKHTAVTSVLSKSWRNLWKLIPNLDID 47


>ref|XP_012572960.1| PREDICTED: putative F-box protein At1g67390 [Cicer arietinum]
          Length = 482

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
 Frame = -2

Query: 201 VKQELDHISNLPEPIRCQIISPLPIDELVRTSILSKSWQHSWKHVPNLDFNLIRMTK--- 31
           + ++LD IS LP+ +  +IIS L I+E  RTSILSK W H WK+V +LDF+   M K   
Sbjct: 9   LNEDLDFISQLPDNLLSRIISFLSINEAARTSILSKRWIHLWKNVFHLDFDWANMIKFIP 68

Query: 30  ------ACRELF 13
                  C+E F
Sbjct: 69  KYYHHRLCKEFF 80


Top