BLASTX nr result
ID: Forsythia23_contig00044439
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia23_contig00044439 (448 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_009783549.1| PREDICTED: uncharacterized protein LOC104232... 57 4e-06 gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 57 4e-06 gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu... 57 4e-06 ref|XP_010684010.1| PREDICTED: uncharacterized protein LOC104898... 54 5e-06 >ref|XP_009783549.1| PREDICTED: uncharacterized protein LOC104232135 [Nicotiana sylvestris] Length = 232 Score = 57.4 bits (137), Expect = 4e-06 Identities = 29/58 (50%), Positives = 37/58 (63%) Frame = +2 Query: 32 VKGQDVHAMNAAEMENAKIM*GHTKLDKIKNENMRQ*VKVESV*DKTREGRFRRLGHV 205 VK + + AEM + M GHT+LDKI+NE++R+ V V V DK RE RFR GHV Sbjct: 112 VKNSHIQKIKVAEMRMLRWMCGHTRLDKIRNEDIRERVSVAPVDDKMREARFRWFGHV 169 >gb|AAT40504.2| Polyprotein, putative [Solanum demissum] Length = 868 Score = 57.4 bits (137), Expect = 4e-06 Identities = 31/58 (53%), Positives = 37/58 (63%) Frame = +2 Query: 32 VKGQDVHAMNAAEMENAKIM*GHTKLDKIKNENMRQ*VKVESV*DKTREGRFRRLGHV 205 VK VH M+ AEM + M GHT+ DKI+NE +R+ V V SV DK RE R R GHV Sbjct: 571 VKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHV 628 >gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum] Length = 213 Score = 57.4 bits (137), Expect = 4e-06 Identities = 31/58 (53%), Positives = 37/58 (63%) Frame = +2 Query: 32 VKGQDVHAMNAAEMENAKIM*GHTKLDKIKNENMRQ*VKVESV*DKTREGRFRRLGHV 205 VK VH M+ AEM + M GHT+ DKI+NE +R+ V V SV DK RE R R GHV Sbjct: 103 VKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHV 160 >ref|XP_010684010.1| PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris] Length = 357 Score = 53.9 bits (128), Expect(2) = 5e-06 Identities = 28/58 (48%), Positives = 37/58 (63%) Frame = +2 Query: 32 VKGQDVHAMNAAEMENAKIM*GHTKLDKIKNENMRQ*VKVESV*DKTREGRFRRLGHV 205 VK VH MN AEM + M GHT+ D+++NE +R+ V V S+ +K RE R R GHV Sbjct: 235 VKQCHVHKMNVAEMRMLRWMCGHTRKDRLRNEVIREKVGVASIEEKMRENRLRWFGHV 292 Score = 22.7 bits (47), Expect(2) = 5e-06 Identities = 8/18 (44%), Positives = 13/18 (72%) Frame = +3 Query: 246 KFRSRPKLTWLVGVSTNL 299 K R RPK+TWL + +++ Sbjct: 314 KGRGRPKMTWLRVIESDM 331