BLASTX nr result

ID: Forsythia23_contig00044439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00044439
         (448 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009783549.1| PREDICTED: uncharacterized protein LOC104232...    57   4e-06
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                57   4e-06
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    57   4e-06
ref|XP_010684010.1| PREDICTED: uncharacterized protein LOC104898...    54   5e-06

>ref|XP_009783549.1| PREDICTED: uncharacterized protein LOC104232135 [Nicotiana
           sylvestris]
          Length = 232

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 29/58 (50%), Positives = 37/58 (63%)
 Frame = +2

Query: 32  VKGQDVHAMNAAEMENAKIM*GHTKLDKIKNENMRQ*VKVESV*DKTREGRFRRLGHV 205
           VK   +  +  AEM   + M GHT+LDKI+NE++R+ V V  V DK RE RFR  GHV
Sbjct: 112 VKNSHIQKIKVAEMRMLRWMCGHTRLDKIRNEDIRERVSVAPVDDKMREARFRWFGHV 169


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 31/58 (53%), Positives = 37/58 (63%)
 Frame = +2

Query: 32  VKGQDVHAMNAAEMENAKIM*GHTKLDKIKNENMRQ*VKVESV*DKTREGRFRRLGHV 205
           VK   VH M+ AEM   + M GHT+ DKI+NE +R+ V V SV DK RE R R  GHV
Sbjct: 571 VKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHV 628


>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 31/58 (53%), Positives = 37/58 (63%)
 Frame = +2

Query: 32  VKGQDVHAMNAAEMENAKIM*GHTKLDKIKNENMRQ*VKVESV*DKTREGRFRRLGHV 205
           VK   VH M+ AEM   + M GHT+ DKI+NE +R+ V V SV DK RE R R  GHV
Sbjct: 103 VKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHV 160


>ref|XP_010684010.1| PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris
           subsp. vulgaris]
          Length = 357

 Score = 53.9 bits (128), Expect(2) = 5e-06
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = +2

Query: 32  VKGQDVHAMNAAEMENAKIM*GHTKLDKIKNENMRQ*VKVESV*DKTREGRFRRLGHV 205
           VK   VH MN AEM   + M GHT+ D+++NE +R+ V V S+ +K RE R R  GHV
Sbjct: 235 VKQCHVHKMNVAEMRMLRWMCGHTRKDRLRNEVIREKVGVASIEEKMRENRLRWFGHV 292



 Score = 22.7 bits (47), Expect(2) = 5e-06
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 246 KFRSRPKLTWLVGVSTNL 299
           K R RPK+TWL  + +++
Sbjct: 314 KGRGRPKMTWLRVIESDM 331


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