BLASTX nr result
ID: Forsythia23_contig00044400
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00044400
(578 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein A... 57 4e-14
ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein A... 57 4e-14
gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indi... 56 9e-14
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 54 3e-13
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 54 3e-13
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 54 3e-13
gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japo... 56 6e-13
emb|CAE01608.2| OSJNBa0052O21.12 [Oryza sativa Japonica Group] 56 6e-13
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 50 2e-12
ref|XP_006492487.1| PREDICTED: uncharacterized protein LOC102625... 52 4e-12
ref|XP_007226724.1| hypothetical protein PRUPE_ppa019750mg, part... 57 6e-12
ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein A... 49 1e-11
ref|XP_004310201.2| PREDICTED: uncharacterized protein LOC101298... 55 1e-11
gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indi... 65 1e-11
gb|KMS97068.1| hypothetical protein BVRB_7g179290 [Beta vulgaris... 57 1e-11
ref|XP_009118884.1| PREDICTED: putative ribonuclease H protein A... 54 2e-11
ref|XP_009139360.1| PREDICTED: uncharacterized protein LOC103863... 55 2e-11
ref|XP_010686872.1| PREDICTED: uncharacterized protein LOC104901... 54 3e-11
ref|XP_008232007.1| PREDICTED: putative ribonuclease H protein A... 57 3e-11
ref|XP_010688582.1| PREDICTED: uncharacterized protein LOC104902... 57 4e-11
>ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 478
Score = 56.6 bits (135), Expect(2) = 4e-14
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = -2
Query: 295 RVCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFRDTD 140
++C+ K LGF+ FNQ L+AKQ WR+L N SL K+L+ KYF+ TD
Sbjct: 279 KLCSAKTRGGLGFREFSSFNQALIAKQGWRVLHNLDSLMAKILKAKYFKHTD 330
Score = 47.8 bits (112), Expect(2) = 4e-14
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = -3
Query: 132 QLPSSIFFLWRSILWGNDLLLKGLRWRVGKGENI 31
+L S+ F+WRSILWG LL +GLRWRVG G I
Sbjct: 335 KLGSNPSFVWRSILWGRQLLHEGLRWRVGNGHKI 368
>ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 387
Score = 56.6 bits (135), Expect(2) = 4e-14
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = -2
Query: 295 RVCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFRDTD 140
++C+ K LGF+ FNQ L+AKQ WR+L N SL K+L+ KYF+ TD
Sbjct: 188 KLCSAKTRGGLGFREFSSFNQALIAKQGWRVLHNLDSLMAKILKAKYFKHTD 239
Score = 47.8 bits (112), Expect(2) = 4e-14
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = -3
Query: 132 QLPSSIFFLWRSILWGNDLLLKGLRWRVGKGENI 31
+L S+ F+WRSILWG LL +GLRWRVG G I
Sbjct: 244 KLGSNPSFVWRSILWGRQLLHEGLRWRVGNGHKI 277
>gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indica Group]
Length = 1860
Score = 55.8 bits (133), Expect(2) = 9e-14
Identities = 24/55 (43%), Positives = 40/55 (72%)
Frame = -2
Query: 286 TPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFRDTDLASTAK 122
TPK + +GF++L LFNQ ++A+Q WR++ + SL +VL+G+YF ++DL + K
Sbjct: 1620 TPKSLGGMGFRDLGLFNQAMLARQGWRIVTDLVSLCARVLKGRYFPNSDLWNAPK 1674
Score = 47.4 bits (111), Expect(2) = 9e-14
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = -3
Query: 126 PSSIFFLWRSILWGNDLLLKGLRWRVGKGENIRNIYNH 13
P++ F WRSIL+G DLL KG+RW +G G +++ + +H
Sbjct: 1675 PTATSFTWRSILFGRDLLRKGVRWGIGNGSSVKILKDH 1712
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 968
Score = 54.3 bits (129), Expect(2) = 3e-13
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = -2
Query: 295 RVCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFR 149
R+C K LGF++L FNQ LVAKQ+WR++Q SL +V++ KYFR
Sbjct: 457 RLCQAKKRGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFR 505
Score = 47.4 bits (111), Expect(2) = 3e-13
Identities = 17/35 (48%), Positives = 28/35 (80%)
Frame = -3
Query: 132 QLPSSIFFLWRSILWGNDLLLKGLRWRVGKGENIR 28
Q+ S+ ++WRSILWG +++ KGLRWR+G G+ ++
Sbjct: 513 QIGSNPSYIWRSILWGREVIRKGLRWRIGDGKLVK 547
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 54.3 bits (129), Expect(2) = 3e-13
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = -2
Query: 295 RVCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFR 149
R+C K LGF++L FNQ LVAKQ+WR++Q SL +V++ KYFR
Sbjct: 254 RLCQAKKRGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFR 302
Score = 47.4 bits (111), Expect(2) = 3e-13
Identities = 17/35 (48%), Positives = 28/35 (80%)
Frame = -3
Query: 132 QLPSSIFFLWRSILWGNDLLLKGLRWRVGKGENIR 28
Q+ S+ ++WRSILWG +++ KGLRWR+G G+ ++
Sbjct: 310 QIGSNPSYIWRSILWGREVIRKGLRWRIGDGKLVK 344
>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 765
Score = 54.3 bits (129), Expect(2) = 3e-13
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = -2
Query: 295 RVCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFR 149
R+C K LGF++L FNQ LVAKQ+WR++Q SL +V++ KYFR
Sbjct: 254 RLCQAKKRGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFR 302
Score = 47.4 bits (111), Expect(2) = 3e-13
Identities = 17/35 (48%), Positives = 28/35 (80%)
Frame = -3
Query: 132 QLPSSIFFLWRSILWGNDLLLKGLRWRVGKGENIR 28
Q+ S+ ++WRSILWG +++ KGLRWR+G G+ ++
Sbjct: 310 QIGSNPSYIWRSILWGREVIRKGLRWRIGDGKLVK 344
>gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japonica Group]
Length = 490
Score = 55.8 bits (133), Expect(2) = 6e-13
Identities = 24/55 (43%), Positives = 40/55 (72%)
Frame = -2
Query: 286 TPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFRDTDLASTAK 122
TPK + +GF++L LFNQ ++A+Q WR++ + SL +VL+G+YF ++DL + K
Sbjct: 333 TPKSLGGMGFRDLGLFNQAMLARQGWRIVTDLVSLCARVLKGRYFPNSDLWNAPK 387
Score = 44.7 bits (104), Expect(2) = 6e-13
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = -3
Query: 126 PSSIFFLWRSILWGNDLLLKGLRWRVGKGENIRNIYNH 13
P++ F W SIL+G DLL KG+RW +G G +++ + +H
Sbjct: 388 PTATSFTWPSILFGRDLLRKGVRWGIGNGSSVKILKDH 425
>emb|CAE01608.2| OSJNBa0052O21.12 [Oryza sativa Japonica Group]
Length = 427
Score = 55.8 bits (133), Expect(2) = 6e-13
Identities = 24/55 (43%), Positives = 40/55 (72%)
Frame = -2
Query: 286 TPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFRDTDLASTAK 122
TPK + +GF++L LFNQ ++A+Q WR++ + SL +VL+G+YF ++DL + K
Sbjct: 270 TPKSLGGMGFRDLGLFNQAMLARQGWRIVTDLVSLCARVLKGRYFPNSDLWNAPK 324
Score = 44.7 bits (104), Expect(2) = 6e-13
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = -3
Query: 126 PSSIFFLWRSILWGNDLLLKGLRWRVGKGENIRNIYNH 13
P++ F W SIL+G DLL KG+RW +G G +++ + +H
Sbjct: 325 PTATSFTWPSILFGRDLLRKGVRWGIGNGSSVKILKDH 362
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 50.4 bits (119), Expect(2) = 2e-12
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = -3
Query: 132 QLPSSIFFLWRSILWGNDLLLKGLRWRVGKGENIR 28
+L SS +LWRS LWG +LL KG+RWR+G G+ +R
Sbjct: 1186 ELGSSPSYLWRSFLWGRELLRKGVRWRIGDGKEVR 1220
Score = 48.5 bits (114), Expect(2) = 2e-12
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = -2
Query: 292 VCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYF 152
+C K LGF++L LFNQ L+ KQ WRL+ SL ++L+ KYF
Sbjct: 1131 LCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYF 1177
>ref|XP_006492487.1| PREDICTED: uncharacterized protein LOC102625512 [Citrus sinensis]
Length = 500
Score = 52.4 bits (124), Expect(2) = 4e-12
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = -2
Query: 265 LGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFRDTD 140
+GFQ+ FNQ LVAKQ WR+LQ SL KVL+ +YF++ D
Sbjct: 49 MGFQDFSSFNQALVAKQGWRILQFPDSLVAKVLQARYFQNKD 90
Score = 45.4 bits (106), Expect(2) = 4e-12
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -3
Query: 132 QLPSSIFFLWRSILWGNDLLLKGLRWRVGKGENIR 28
+L S+ F+WRSILWG +L G RWR+G G+ I+
Sbjct: 95 KLGSTPSFVWRSILWGRQILSSGARWRIGDGQKIQ 129
>ref|XP_007226724.1| hypothetical protein PRUPE_ppa019750mg, partial [Prunus persica]
gi|462423660|gb|EMJ27923.1| hypothetical protein
PRUPE_ppa019750mg, partial [Prunus persica]
Length = 478
Score = 56.6 bits (135), Expect(2) = 6e-12
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = -2
Query: 292 VCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFRDTD 140
+C PK + LGF+ + FNQ +VAKQAWRLL+N SSL ++L +YF + D
Sbjct: 297 LCRPKCLRGLGFKIFEAFNQAMVAKQAWRLLENPSSLVGQILRARYFPNGD 347
Score = 40.4 bits (93), Expect(2) = 6e-12
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = -3
Query: 108 LWRSILWGNDLLLKGLRWRVGKGENIRNIYNHCLLK 1
+WRSILWG ++ +GL WR+G G ++R ++ + K
Sbjct: 360 IWRSILWGRQVIEQGLIWRIGGGTSVRVFHDKWIPK 395
>ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 473
Score = 48.9 bits (115), Expect(2) = 1e-11
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = -2
Query: 292 VCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYF 152
+C K LGF++ FN L+AKQ WRLL N SL K+L+ KYF
Sbjct: 1 MCHAKIRGGLGFRDFSSFNHALLAKQGWRLLHNPDSLMAKILKAKYF 47
Score = 47.4 bits (111), Expect(2) = 1e-11
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -3
Query: 132 QLPSSIFFLWRSILWGNDLLLKGLRWRVGKGENI 31
+L S F+WRSI+WG +LL +GLRWR+G+G I
Sbjct: 56 KLGSKPSFVWRSIIWGRELLQEGLRWRIGQGTKI 89
>ref|XP_004310201.2| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
subsp. vesca]
Length = 1303
Score = 55.1 bits (131), Expect(2) = 1e-11
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -2
Query: 295 RVCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYF 152
++C PK LGF+N++LFNQ L+AK+ WR++ + SL + L+ KYF
Sbjct: 803 KMCAPKNEGGLGFRNMELFNQALLAKKGWRIINSLDSLVTRTLKAKYF 850
Score = 40.8 bits (94), Expect(2) = 1e-11
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -3
Query: 132 QLPSSIFFLWRSILWGNDLLLKGLRWRVGKGENI 31
++ S ++WRS+L G DLL KG+R+ VG GE+I
Sbjct: 859 EMGSDASYVWRSLLKGRDLLRKGIRYHVGNGESI 892
>gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indica Group]
Length = 961
Score = 64.7 bits (156), Expect(2) = 1e-11
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -2
Query: 283 PKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFRDTDLASTA 125
PKG +GF++LKLFNQ L+A+QAWRL+Q SSL +VL+ KYF DL TA
Sbjct: 587 PKGQGGIGFRDLKLFNQALLARQAWRLIQYPSSLCAQVLKAKYFPSGDLIDTA 639
Score = 31.2 bits (69), Expect(2) = 1e-11
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 105 WRSILWGNDLLLKGLRWRVGKGENIR 28
W+ I+ G +LL KGL WR+ G ++
Sbjct: 648 WKGIMHGLELLKKGLIWRISDGSKVK 673
>gb|KMS97068.1| hypothetical protein BVRB_7g179290 [Beta vulgaris subsp. vulgaris]
Length = 849
Score = 56.6 bits (135), Expect(2) = 1e-11
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = -2
Query: 295 RVCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFRD 146
++C PK +GF++LK+FNQ L+AKQ WRLL + +SL VL +YF++
Sbjct: 714 KLCLPKSHGGMGFRDLKVFNQALLAKQGWRLLCDNTSLVYNVLSARYFKN 763
Score = 39.3 bits (90), Expect(2) = 1e-11
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -3
Query: 111 FLWRSILWGNDLLLKGLRWRVGKGENIR 28
F+WRSI LLL+GL+WRVG G IR
Sbjct: 777 FVWRSIWGAKALLLEGLKWRVGDGSKIR 804
>ref|XP_009118884.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 570
Score = 54.3 bits (129), Expect(2) = 2e-11
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = -2
Query: 295 RVCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFRDTDLASTA 125
++C PK + +GF++L+ FNQ L+AKQAW+ L SL + L+ +YF+D + A
Sbjct: 39 KMCLPKHLGGMGFRDLECFNQALLAKQAWKTLNQPQSLISRFLKSRYFKDGNFLEAA 95
Score = 41.2 bits (95), Expect(2) = 2e-11
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -3
Query: 111 FLWRSILWGNDLLLKGLRWRVGKGENIR 28
F WRS+L+G DLL KGLR RVG G IR
Sbjct: 102 FAWRSLLFGRDLLKKGLRLRVGNGLTIR 129
>ref|XP_009139360.1| PREDICTED: uncharacterized protein LOC103863362 [Brassica rapa]
Length = 892
Score = 54.7 bits (130), Expect(2) = 2e-11
Identities = 22/49 (44%), Positives = 36/49 (73%)
Frame = -2
Query: 295 RVCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFR 149
++C PK + +GF++L+ FNQ L+AKQAW++L + SL + LE +YF+
Sbjct: 393 KLCLPKKLGGMGFRDLECFNQALLAKQAWKILTHPQSLLARFLESRYFK 441
Score = 40.4 bits (93), Expect(2) = 2e-11
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -3
Query: 111 FLWRSILWGNDLLLKGLRWRVGKGENIR 28
F WRS+++G +LLLKGLR RVG G+ R
Sbjct: 456 FAWRSLMFGKELLLKGLRQRVGDGKTTR 483
>ref|XP_010686872.1| PREDICTED: uncharacterized protein LOC104901027 [Beta vulgaris
subsp. vulgaris]
Length = 1273
Score = 53.5 bits (127), Expect(2) = 3e-11
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = -2
Query: 292 VCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFR 149
+C PK + LGF++L FN L+AKQAWRL Q+G S +VL+ +Y++
Sbjct: 758 LCLPKSMGGLGFRDLHCFNMALLAKQAWRLSQDGHSFLHQVLKARYYK 805
Score = 41.2 bits (95), Expect(2) = 3e-11
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -3
Query: 111 FLWRSILWGNDLLLKGLRWRVGKGENIR 28
F WRSI LLL+GL+WRVG GE+IR
Sbjct: 820 FTWRSIWGSKALLLEGLKWRVGNGESIR 847
>ref|XP_008232007.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 508
Score = 57.4 bits (137), Expect(2) = 3e-11
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = -2
Query: 292 VCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFRDTD 140
+C PK + LGF+ + FNQ +VAKQAWRLL+N SSL ++L +YF + D
Sbjct: 23 LCRPKCLGGLGFKIFEAFNQAMVAKQAWRLLENPSSLVGRILRARYFPNGD 73
Score = 37.4 bits (85), Expect(2) = 3e-11
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -3
Query: 108 LWRSILWGNDLLLKGLRWRVGKGENIRNIYNHCLLK 1
+WRSILWG ++ +GL W +G G ++R ++ + K
Sbjct: 86 IWRSILWGRQVIEQGLIWCIGGGTSVRVFHDKWIPK 121
>ref|XP_010688582.1| PREDICTED: uncharacterized protein LOC104902493 [Beta vulgaris subsp.
vulgaris]
Length = 1771
Score = 56.6 bits (135), Expect(2) = 4e-11
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = -2
Query: 292 VCTPKGVDELGFQNLKLFNQVLVAKQAWRLLQNGSSLAVKVLEGKYFR 149
+C PK + +GF++LK FNQ ++AKQ WRL +N SL KV + +YF+
Sbjct: 1053 LCLPKAMGGMGFRDLKCFNQAMLAKQCWRLFENPHSLLYKVFKARYFK 1100
Score = 37.7 bits (86), Expect(2) = 4e-11
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3
Query: 111 FLWRSILWGNDLLLKGLRWRVGKGENIR 28
+ WRSI LLL+GLRWRVG G +I+
Sbjct: 1115 YSWRSIWGAKSLLLEGLRWRVGNGVSIK 1142