BLASTX nr result

ID: Forsythia23_contig00043679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00043679
         (332 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP05206.1| unnamed protein product [Coffea canephora]             60   4e-07
ref|XP_009590947.1| PREDICTED: cingulin-like protein 1 [Nicotian...    58   2e-06

>emb|CDP05206.1| unnamed protein product [Coffea canephora]
          Length = 917

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 50/160 (31%)
 Frame = +3

Query: 3   HVTIQKIQGDLDSRCTEESEA--------LVE----DFDSYGKKNLQSPE---------- 116
           HVTIQK++  LD R  EE+E+        ++E    D ++  K NL+  E          
Sbjct: 133 HVTIQKLERTLDERYIEENESPTTNYHNGILEMQLLDSENSQKTNLEFTEGEQPNRITSQ 192

Query: 117 ----NGSFGDTESDNNGVYR------------------------RSYTDMSLECASDRSM 212
               NGS  DT  D+   YR                        + Y+D  L+  SD S+
Sbjct: 193 YPEQNGSVEDTRFDDASAYRVCLTTADNTLERVSLDADPPGHVYQRYSDGLLKDTSDESV 252

Query: 213 VNKTNSSDETCSRDGVEETSNDIIGKLKNQITMLERRAEV 332
           ++ T S  E  +RD ++E SND +G+L  +I MLER+ EV
Sbjct: 253 IDTTTSLQEKYARDRIQEASND-VGRLNTRIKMLERQGEV 291


>ref|XP_009590947.1| PREDICTED: cingulin-like protein 1 [Nicotiana tomentosiformis]
           gi|697164285|ref|XP_009590948.1| PREDICTED:
           cingulin-like protein 1 [Nicotiana tomentosiformis]
           gi|697164287|ref|XP_009590950.1| PREDICTED:
           cingulin-like protein 1 [Nicotiana tomentosiformis]
          Length = 906

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 41/151 (27%)
 Frame = +3

Query: 3   HVTIQKIQGDLDSRCTEESE-----ALVEDFDS-------YGK--------KNLQSPEN- 119
           HV +Q +QG   +RC+E+SE     +L ++F++       YG         +NL  P + 
Sbjct: 132 HVAVQNMQGAHGTRCSEDSEISRTESLDQNFETELGNDGHYGNGQCTSIEGENLNEPSHY 191

Query: 120 -------------GSFGDTESDNNGV-------YRRSYTDMSLECASDRSMVNKTNSSDE 239
                         SF    +  N V       + RS TD SL    D S+++ T  S+E
Sbjct: 192 LKKNSVPWDPQPKNSFVKQFTPQNAVNPLERHLHHRSSTDCSLGSDLDGSLIDTTYKSEE 251

Query: 240 TCSRDGVEETSNDIIGKLKNQITMLERRAEV 332
              RD   ETS++    +KN+ITMLER+AE+
Sbjct: 252 DLLRDNARETSSNSFESMKNKITMLERQAEL 282


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