BLASTX nr result

ID: Forsythia23_contig00043146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00043146
         (401 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD59438.1| Rps16 protein [Clivia gardenii]                        62   4e-08
gb|KMS97977.1| hypothetical protein BVRB_4g096970 [Beta vulgaris...    64   5e-08
gb|KJB60706.1| hypothetical protein B456_009G321000 [Gossypium r...    61   3e-07

>emb|CAD59438.1| Rps16 protein [Clivia gardenii]
          Length = 74

 Score = 61.6 bits (148), Expect(2) = 4e-08
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +1

Query: 220 IVHDGARVERINSFLGGKGLGLMPINKLEQLRKYIFDIEME 342
           IVHDGAR + I+SF+GGK LGL+ INKL+QL KYI +IEME
Sbjct: 25  IVHDGARTKSIDSFIGGKNLGLVTINKLDQLCKYILNIEME 65



 Score = 22.3 bits (46), Expect(2) = 4e-08
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 159 SWLDIVCSVPLEPFVFSWVVN 221
           S +DIVCSVP    +   +VN
Sbjct: 1   SRIDIVCSVPARNLICVGLVN 21


>gb|KMS97977.1| hypothetical protein BVRB_4g096970 [Beta vulgaris subsp. vulgaris]
          Length = 50

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -3

Query: 102 CPSSRTLLSTTSFQTRFYHYIPLIWNRYGIDSIM 1
           CP SRTLLSTTSFQT+FYH IP  WN+YG+DSIM
Sbjct: 15  CPLSRTLLSTTSFQTKFYHNIPQFWNQYGVDSIM 48


>gb|KJB60706.1| hypothetical protein B456_009G321000 [Gossypium raimondii]
          Length = 75

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 32/54 (59%), Positives = 37/54 (68%)
 Frame = -1

Query: 218 YNPRKNEGFEWNRTNDVEPRAPSFLYKYKIADVKIHNGSVLQVARCFLPHRFKR 57
           YNP+K    ++NRT DVE +APSFLY  K   +      VLQVARCFLPHRFKR
Sbjct: 17  YNPKKKT--DYNRTKDVEQKAPSFLYNGKWWVLTSTADHVLQVARCFLPHRFKR 68


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