BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00043143
         (500 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081263.1| PREDICTED: pentatricopeptide repeat-containi...   272   7e-71
ref|XP_012827302.1| PREDICTED: pentatricopeptide repeat-containi...   249   4e-64
gb|EYU19328.1| hypothetical protein MIMGU_mgv1a025271mg [Erythra...   249   4e-64
ref|XP_010662158.1| PREDICTED: pentatricopeptide repeat-containi...   234   2e-59
ref|XP_009600868.1| PREDICTED: pentatricopeptide repeat-containi...   233   3e-59
ref|XP_008346407.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   232   8e-59
emb|CDP01475.1| unnamed protein product [Coffea canephora]            231   2e-58
ref|XP_009791059.1| PREDICTED: pentatricopeptide repeat-containi...   226   3e-57
ref|XP_011031040.1| PREDICTED: pentatricopeptide repeat-containi...   224   1e-56
ref|XP_009370728.1| PREDICTED: pentatricopeptide repeat-containi...   224   1e-56
ref|XP_008234126.1| PREDICTED: pentatricopeptide repeat-containi...   223   3e-56
ref|XP_002307076.2| pentatricopeptide repeat-containing family p...   223   4e-56
ref|XP_006353228.1| PREDICTED: pentatricopeptide repeat-containi...   223   5e-56
ref|XP_007207635.1| hypothetical protein PRUPE_ppa021864mg [Prun...   221   1e-55
ref|XP_007047919.1| Pentatricopeptide repeat (PPR) superfamily p...   219   5e-55
ref|XP_004250511.2| PREDICTED: pentatricopeptide repeat-containi...   218   9e-55
ref|XP_010025438.1| PREDICTED: pentatricopeptide repeat-containi...   216   4e-54
ref|XP_010087614.1| hypothetical protein L484_022141 [Morus nota...   216   6e-54
ref|XP_008382134.1| PREDICTED: pentatricopeptide repeat-containi...   214   1e-53
ref|XP_012489272.1| PREDICTED: pentatricopeptide repeat-containi...   213   3e-53

>ref|XP_011081263.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Sesamum indicum]
           gi|747068975|ref|XP_011081264.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Sesamum indicum]
           gi|747068977|ref|XP_011081265.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Sesamum indicum]
           gi|747068979|ref|XP_011081266.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Sesamum indicum]
          Length = 775

 Score =  272 bits (695), Expect = 7e-71
 Identities = 128/166 (77%), Positives = 144/166 (86%)
 Frame = -1

Query: 500 PHSSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSA 321
           PHSS KVFD LSFKD FLWNS+IKAHFSN  Y +ALDFFSKM S   +PNQFTIP+VVSA
Sbjct: 76  PHSSTKVFDSLSFKDPFLWNSIIKAHFSNRNYVQALDFFSKMPSFGNLPNQFTIPMVVSA 135

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           CAE+GSLCFGMNVHG+ +KLNLF GNSAVG+SFVYMYSKCG ++DAS VFDEI MKDVVA
Sbjct: 136 CAELGSLCFGMNVHGLASKLNLFCGNSAVGASFVYMYSKCGVVDDASFVFDEIAMKDVVA 195

Query: 140 WTALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           WTA++IG+VQNGES+  L+CL EMHR+GG  ERPN RTLEG FQAC
Sbjct: 196 WTAIVIGYVQNGESDSSLQCLCEMHRLGGYDERPNSRTLEGGFQAC 241



 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 48/153 (31%), Positives = 76/153 (49%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           +D   WNS+I  +  +G   +AL  F KM S    PN  T+  ++SACA+  SL  G  +
Sbjct: 496 QDIATWNSLISCYADSGHPFKALILFDKMISTGLKPNTTTLVTLLSACAQTASLDKGRKI 555

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  + +    Y   ++ ++ V MY+KCG ++ A  +FD +  KDVV+W  +I  +  +G 
Sbjct: 556 HDYIREQGFEY-EVSLATALVDMYAKCGQIDLAKEIFDSMNEKDVVSWNVMISSYGMHGH 614

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
            +  +    +M     N  RPN  T      AC
Sbjct: 615 GKSAINVFQQMEE---NGARPNDLTFLSVLSAC 644



 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSC---NTMPNQFTIPIVVSACAE 312
           VFD ++ KD   W +++  +  NG+   +L    +M      +  PN  T+     AC  
Sbjct: 184 VFDEIAMKDVVAWTAIVIGYVQNGESDSSLQCLCEMHRLGGYDERPNSRTLEGGFQACGN 243

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           + +L  G  +HG   K  +   +  V S+ + MYSKCG++EDA V F E++ KD+ +WT+
Sbjct: 244 LSALTEGRCLHGFALKSGIM-SSHIVQSAVLSMYSKCGSIEDARVSFCEVVNKDLFSWTS 302

Query: 131 LIIGHVQNGESEKGLECLSEMHRIGGNSERPN 36
            I  H + G      EC     ++  N   P+
Sbjct: 303 FIGVHAKLGYV---CECFQIFFKMQANGVYPD 331



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 41/148 (27%), Positives = 71/148 (47%)
 Frame = -1

Query: 446 WNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNVHGMVT 267
           WN +I ++   G     +  F +M       +  ++  VVS+C+ +G++ FG +VH  + 
Sbjct: 401 WNLMIVSYEKAGLEMNCIKLFREMQHEGIEADLNSVISVVSSCSRLGAIHFGQSVHCHII 460

Query: 266 KLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGESEKGL 87
           K +L +   +V +S + MY KCG +  A  +F +   +D+  W +LI  +  +G   K L
Sbjct: 461 K-SLMFEKVSVVNSLINMYGKCGNLTMAQSLFHQ-TSQDIATWNSLISCYADSGHPFKAL 518

Query: 86  ECLSEMHRIGGNSERPNFRTLEGCFQAC 3
               +M   G    +PN  TL     AC
Sbjct: 519 ILFDKMISTG---LKPNTTTLVTLLSAC 543


>ref|XP_012827302.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Erythranthe guttatus]
          Length = 753

 Score =  249 bits (637), Expect = 4e-64
 Identities = 115/164 (70%), Positives = 142/164 (86%)
 Frame = -1

Query: 494 SSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACA 315
           S+ +VFDFL+ KD+FLWNS+IKAHFSNG YAEA+DFFS+M     +PNQFTIP+VVSACA
Sbjct: 85  SATRVFDFLAVKDTFLWNSIIKAHFSNGNYAEAVDFFSEMRVFGALPNQFTIPMVVSACA 144

Query: 314 EVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWT 135
           E+GS+C G+ +H +V+KLNLF+GNSAVG+SFVYMYSKCG +EDA  VFDE+ ++DVVAWT
Sbjct: 145 ELGSVCIGLQIHCLVSKLNLFHGNSAVGASFVYMYSKCGDVEDACHVFDEMPVRDVVAWT 204

Query: 134 ALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           AL+IG+VQNGESE+ L+CL +MH +GG  ERPN RTLEG FQAC
Sbjct: 205 ALVIGYVQNGESEQALQCLCKMHHVGGYGERPNSRTLEGGFQAC 248



 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 2/154 (1%)
 Frame = -1

Query: 458 DSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNVH 279
           D   WNS+I ++  NG+Y +AL+ F KM S     N  T+  ++SAC  + SL  G  +H
Sbjct: 473 DIATWNSLISSYNDNGEYLDALNLFDKMISQGVKANTATLLSLLSACTHIASLENGRKIH 532

Query: 278 GMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGES 99
             + +  + Y   +V +S V MY+KCG +E A  +FD    KDV++W  +I  +  +G+ 
Sbjct: 533 NYIIEEGIKY-EVSVATSLVDMYAKCGQIETAKEIFDSTEEKDVISWNVMISCYGMHGDG 591

Query: 98  EKGLECLSEMHRIGGNSER--PNFRTLEGCFQAC 3
           +  ++   +M R    +ER  PN  T      AC
Sbjct: 592 KSAIQVFEKMERC---NERIFPNELTFLALLSAC 622



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCN---TMPNQFTIPIVVSACAE 312
           VFD +  +D   W +++  +  NG+  +AL    KM         PN  T+     AC +
Sbjct: 191 VFDEMPVRDVVAWTALVIGYVQNGESEQALQCLCKMHHVGGYGERPNSRTLEGGFQACGD 250

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           +G+L  G  +HG+  K      +  V S+ + MYSKCG++ED+ V F E++ KD+++WT+
Sbjct: 251 LGALVEGRCLHGLALKFGTV-SSRIVQSAILSMYSKCGSIEDSRVSFSEVVNKDLLSWTS 309

Query: 131 LI 126
           +I
Sbjct: 310 II 311


>gb|EYU19328.1| hypothetical protein MIMGU_mgv1a025271mg [Erythranthe guttata]
          Length = 715

 Score =  249 bits (637), Expect = 4e-64
 Identities = 115/164 (70%), Positives = 142/164 (86%)
 Frame = -1

Query: 494 SSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACA 315
           S+ +VFDFL+ KD+FLWNS+IKAHFSNG YAEA+DFFS+M     +PNQFTIP+VVSACA
Sbjct: 47  SATRVFDFLAVKDTFLWNSIIKAHFSNGNYAEAVDFFSEMRVFGALPNQFTIPMVVSACA 106

Query: 314 EVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWT 135
           E+GS+C G+ +H +V+KLNLF+GNSAVG+SFVYMYSKCG +EDA  VFDE+ ++DVVAWT
Sbjct: 107 ELGSVCIGLQIHCLVSKLNLFHGNSAVGASFVYMYSKCGDVEDACHVFDEMPVRDVVAWT 166

Query: 134 ALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           AL+IG+VQNGESE+ L+CL +MH +GG  ERPN RTLEG FQAC
Sbjct: 167 ALVIGYVQNGESEQALQCLCKMHHVGGYGERPNSRTLEGGFQAC 210



 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 2/154 (1%)
 Frame = -1

Query: 458 DSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNVH 279
           D   WNS+I ++  NG+Y +AL+ F KM S     N  T+  ++SAC  + SL  G  +H
Sbjct: 435 DIATWNSLISSYNDNGEYLDALNLFDKMISQGVKANTATLLSLLSACTHIASLENGRKIH 494

Query: 278 GMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGES 99
             + +  + Y   +V +S V MY+KCG +E A  +FD    KDV++W  +I  +  +G+ 
Sbjct: 495 NYIIEEGIKY-EVSVATSLVDMYAKCGQIETAKEIFDSTEEKDVISWNVMISCYGMHGDG 553

Query: 98  EKGLECLSEMHRIGGNSER--PNFRTLEGCFQAC 3
           +  ++   +M R    +ER  PN  T      AC
Sbjct: 554 KSAIQVFEKMERC---NERIFPNELTFLALLSAC 584



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCN---TMPNQFTIPIVVSACAE 312
           VFD +  +D   W +++  +  NG+  +AL    KM         PN  T+     AC +
Sbjct: 153 VFDEMPVRDVVAWTALVIGYVQNGESEQALQCLCKMHHVGGYGERPNSRTLEGGFQACGD 212

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           +G+L  G  +HG+  K      +  V S+ + MYSKCG++ED+ V F E++ KD+++WT+
Sbjct: 213 LGALVEGRCLHGLALKFGTV-SSRIVQSAILSMYSKCGSIEDSRVSFSEVVNKDLLSWTS 271

Query: 131 LI 126
           +I
Sbjct: 272 II 273


>ref|XP_010662158.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Vitis vinifera]
           gi|731422578|ref|XP_010662160.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Vitis vinifera]
           gi|731422580|ref|XP_010662161.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Vitis vinifera]
           gi|731422582|ref|XP_010662162.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Vitis vinifera]
           gi|731422584|ref|XP_010662163.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Vitis vinifera]
          Length = 782

 Score =  234 bits (596), Expect = 2e-59
 Identities = 108/166 (65%), Positives = 137/166 (82%)
 Frame = -1

Query: 500 PHSSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSA 321
           P  S ++FD +  +D+FLWNS+IKAHFSNG+Y+ ALDF+  M +   +PN FTIP++V++
Sbjct: 83  PSCSTELFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVAS 142

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           CAE+  + +G ++HG+V+KL LF G+SAVGSSFVYMYSKCG +E+A  VFDEIL +DVVA
Sbjct: 143 CAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVVA 202

Query: 140 WTALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           WTAL+IG VQNGES+ GLECL EMHRIGG+ ERPNFRTLEG FQAC
Sbjct: 203 WTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQAC 248



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 46/153 (30%), Positives = 81/153 (52%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           +D   WN++I ++   G +AEAL  + KM   +  PN  T+  V+SAC+ + SL  G  V
Sbjct: 503 RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKV 562

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  +     F  N ++ ++ + MY+KCG +E +  +F+ +  +DV+ W  +I G+  +G+
Sbjct: 563 HNYING-GKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGD 621

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           +   +E   +M     +S +PN  T      AC
Sbjct: 622 ARSAIEFFQQMEE---SSAKPNGLTFLAVLSAC 651



 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCN---TMPNQFTIPIVVSACAE 312
           VFD + F+D   W +++     NG+    L+   +M         PN  T+     AC  
Sbjct: 191 VFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGN 250

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           +G+L  G  +HG+V K  + Y +  V S  + MYSKCG  E+A   F E+L KD+++WT+
Sbjct: 251 LGALLEGRCLHGLVVKTGMDY-SQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDIISWTS 309

Query: 131 LIIGHVQNGESEKGLECLSEM 69
           +I  + + G + + ++   EM
Sbjct: 310 MISAYSRMGWATECIDMFWEM 330



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
 Frame = -1

Query: 479 FDFLSFKDSFL----------WNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIV 330
           F FL   + F           WN ++  +   G   + +  F +M       +  ++  V
Sbjct: 387 FGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGLFREMQCLGIESDSNSLVSV 446

Query: 329 VSACAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKD 150
           VS+C+++G+     ++H  + K NL   N +V +S + MY K G +  A  +F  I  +D
Sbjct: 447 VSSCSQLGATHLARSIHCYMIK-NLMDENVSVNNSLIDMYGKSGNLTIARRIFCRI-PRD 504

Query: 149 VVAWTALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           +V W  LI  +   G      E LS   ++     +PN  TL     AC
Sbjct: 505 IVTWNTLISSYAHCGHF---AEALSLYDKMVLEDLKPNSATLVSVLSAC 550


>ref|XP_009600868.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Nicotiana tomentosiformis]
          Length = 769

 Score =  233 bits (595), Expect = 3e-59
 Identities = 115/169 (68%), Positives = 139/169 (82%), Gaps = 3/169 (1%)
 Frame = -1

Query: 500 PH--SSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVV 327
           PH  +S KVFD +SFKD FLWNS+IKA+FSNG Y+EALDF+S M   N +PNQFTIPIVV
Sbjct: 66  PHLINSRKVFDLISFKDPFLWNSIIKAYFSNGYYSEALDFYSNMRGFNALPNQFTIPIVV 125

Query: 326 SACAEVGSLCFGMNVHGMVTKLNLFYG-NSAVGSSFVYMYSKCGAMEDASVVFDEILMKD 150
           SACAE+G + +G N+HG+V+KLNLF+G N+AVGSS VYMYSKCG ME A+ VFDEI ++D
Sbjct: 126 SACAELGLIYYGKNIHGLVSKLNLFHGNNAAVGSSLVYMYSKCGFMEYAADVFDEINVRD 185

Query: 149 VVAWTALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           VV+WTA++ G+V+NGESEKGLE L  MH+ G    RPNFRTLEG FQAC
Sbjct: 186 VVSWTAIVKGYVENGESEKGLEYLCLMHKNGEGEVRPNFRTLEGGFQAC 234



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 51/163 (31%), Positives = 87/163 (53%)
 Frame = -1

Query: 491 SAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAE 312
           S ++F  +  KD   WN+++ ++ S GK  EA   F KM + +  P   T+ I++SAC++
Sbjct: 480 SWRLFCMMINKDVVTWNTMMTSYISCGKITEAFGLFDKMIAESYKPTIATLLILLSACSQ 539

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           V SL  G  V+  + ++  F  N+ + ++   MY+KCG +  +  +FD +  KDVV+W  
Sbjct: 540 VSSLEKGERVYEYIKEVG-FEKNTLLATALTDMYAKCGQLTKSREIFDSVDKKDVVSWNV 598

Query: 131 LIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           LI G+   GE+   +E   +M +   +  +PN  T      AC
Sbjct: 599 LISGYAMYGEATSAIEIFKQMEQ---SKNKPNELTFLAVLSAC 638



 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
 Frame = -1

Query: 491 SAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCN---TMPNQFTIPIVVSA 321
           +A VFD ++ +D   W +++K +  NG+  + L++   M         PN  T+     A
Sbjct: 174 AADVFDEINVRDVVSWTAIVKGYVENGESEKGLEYLCLMHKNGEGEVRPNFRTLEGGFQA 233

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           C  +G+L  G  +HG+  K   F  +  V  S + MYSKCG++E+A   F E+  KD+++
Sbjct: 234 CGNLGALVEGKCLHGLTVKSG-FVSHHVVQCSVLSMYSKCGSVEEAYCSFCEVHEKDLLS 292

Query: 140 WTALI 126
           WT++I
Sbjct: 293 WTSII 297


>ref|XP_008346407.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g39952, mitochondrial-like [Malus domestica]
          Length = 781

 Score =  232 bits (591), Expect = 8e-59
 Identities = 116/166 (69%), Positives = 133/166 (80%)
 Frame = -1

Query: 500 PHSSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSA 321
           P SS KVF  +S KD+FLWNS+IK HFSNG Y++AL FF +M +    PNQFT+P+VVS+
Sbjct: 82  PTSSTKVFASVSPKDTFLWNSIIKTHFSNGGYSKALVFFFQMRASGFAPNQFTLPMVVSS 141

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           CAE+  L  G NVHG+  KL LF GNSAVGSSFVYMYSKCG MEDAS++FDEI ++DVV 
Sbjct: 142 CAELMVLDHGNNVHGLGKKLGLFAGNSAVGSSFVYMYSKCGRMEDASJMFDEITVRDVVC 201

Query: 140 WTALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           WTALIIG+VQN ESEKGLECL EMHRIGG  ERPNFRTLE   QAC
Sbjct: 202 WTALIIGYVQNDESEKGLECLCEMHRIGGIGERPNFRTLEVGLQAC 247



 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 52/153 (33%), Positives = 84/153 (54%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           KD   WNS+I ++  NG   EA+D + KM + N MPN  T+  V+SAC+ + SL  G+ V
Sbjct: 502 KDIITWNSLISSYTHNGHSFEAIDLYHKMIAENFMPNSATLVTVLSACSHLASLEEGIKV 561

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  + K      N ++ ++ V MY+KCG +E +  +F+ +  +DV++W  +I G+  +G 
Sbjct: 562 HCHI-KERRIGNNLSLSTALVDMYAKCGELEKSRELFNSMEDRDVISWNVMISGYATHGH 620

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           +E  +E   EM     ++  PN  T      AC
Sbjct: 621 AESAIELFHEME---DSNVIPNELTFLALLSAC 650



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTM---PNQFTIPIVVSACAE 312
           +FD ++ +D   W ++I  +  N +  + L+   +M     +   PN  T+ + + AC +
Sbjct: 190 MFDEITVRDVVCWTALIIGYVQNDESEKGLECLCEMHRIGGIGERPNFRTLEVGLQACGD 249

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           +G+L  G  +HG V K  +   + AV S  + MYS+CG  E++ + F +I  KDV++WT+
Sbjct: 250 LGALVEGRCLHGFVVKRGIGC-SGAVKSLLLSMYSRCGRPEESYLSFCDIENKDVISWTS 308

Query: 131 LIIGHVQNGESEKGLECLSEM 69
           +I  + ++G  +  L    EM
Sbjct: 309 VIGVYARSGLMDGCLSLFWEM 329



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 41/161 (25%), Positives = 78/161 (48%)
 Frame = -1

Query: 485 KVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVG 306
           K+F  +  ++    N++I  +   G   + ++ F KM       +  ++  VVS+C ++G
Sbjct: 394 KLFSGMQHQNKESCNTMIYGYGKLGLRTKCIELFRKMRHQGIEADSNSLVSVVSSCFQMG 453

Query: 305 SLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALI 126
           ++  G ++H  + K+ +   N +V +S + MY K G +  A  +F  +  KD++ W +LI
Sbjct: 454 TIHLGQSLHCFIIKVCMDE-NVSVANSLIDMYGKSGYLTIARRIFS-VTQKDIITWNSLI 511

Query: 125 IGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
             +  NG S    E +   H++   +  PN  TL     AC
Sbjct: 512 SSYTHNGHS---FEAIDLYHKMIAENFMPNSATLVTVLSAC 549


>emb|CDP01475.1| unnamed protein product [Coffea canephora]
          Length = 808

 Score =  231 bits (588), Expect = 2e-58
 Identities = 110/164 (67%), Positives = 132/164 (80%)
 Frame = -1

Query: 494 SSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACA 315
           S  K+F     KD FLWNS+IKAHFSNG Y  AL+FF KM      P+QF+IP+VVSACA
Sbjct: 111 SCTKIFSSTKCKDPFLWNSIIKAHFSNGNYLPALEFFHKMRFSGFSPDQFSIPMVVSACA 170

Query: 314 EVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWT 135
           E+G +  GM  H +V+KLNLF GNSAVGSSF+YMY+KCG M+DAS+VFDE+L KDVVAWT
Sbjct: 171 ELGLVQNGMKAHALVSKLNLFNGNSAVGSSFIYMYAKCGYMDDASLVFDEMLNKDVVAWT 230

Query: 134 ALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           AL++G+VQNGES KGLEC+ +M +IGG+ ERPNFRTLEG FQAC
Sbjct: 231 ALVVGYVQNGESVKGLECVCDMLKIGGDDERPNFRTLEGGFQAC 274



 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 47/153 (30%), Positives = 86/153 (56%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           KD+  WN +I ++  NG  +EAL  F++M    T PN  T+  ++SAC+++ SL  G  +
Sbjct: 529 KDTVTWNVLISSYAHNGYSSEALALFNQMVLEGTKPNTATLVTLLSACSQLASLEKGEQI 588

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  + ++  F  + ++ ++ V MY+KCG +  +  VFD +  KDV+++  +I G+  +G+
Sbjct: 589 HNYIKEVG-FESSLSLDTALVDMYAKCGQLIKSREVFDLMNTKDVISYNVMISGYGVHGD 647

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
            +  +E   +M +   ++ RPN  T      AC
Sbjct: 648 VKSAIEIFEQMEQ---SNNRPNELTFLAIISAC 677



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSC---NTMPNQFTIPIVVSACAE 312
           VFD +  KD   W +++  +  NG+  + L+    M      +  PN  T+     AC  
Sbjct: 217 VFDEMLNKDVVAWTALVVGYVQNGESVKGLECVCDMLKIGGDDERPNFRTLEGGFQACGN 276

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           + +L  G  +HG+  KL     + AV SSF+ MY KCG++E+A   F EI+  D+++WT 
Sbjct: 277 LSALVEGRCLHGLSVKLGTDCSH-AVQSSFLSMYCKCGSLEEAHRAFSEIVNLDLLSWT- 334

Query: 131 LIIGHVQNGES 99
           L+IG     ES
Sbjct: 335 LMIGFYAKMES 345



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 43/165 (26%), Positives = 75/165 (45%)
 Frame = -1

Query: 497 HSSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSAC 318
           H + K+ + +  +D+  WN ++     +   ++ ++ F KM       N   +  V+S+C
Sbjct: 417 HLAEKLLERVHGRDTESWNLIVAGFCKSRLESKCIEMFRKMQHLEIEYNLNCLMSVISSC 476

Query: 317 AEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAW 138
           + + +   G +VH    K +L   + +V +S + MY K G +  A  +F     KD V W
Sbjct: 477 SRLEATLLGRSVHCHAIK-SLACESVSVANSLIDMYGKSGKLNSARRIFSR-TQKDTVTW 534

Query: 137 TALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
             LI  +  NG S + L   ++M   G    +PN  TL     AC
Sbjct: 535 NVLISSYAHNGYSSEALALFNQMVLEG---TKPNTATLVTLLSAC 576


>ref|XP_009791059.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Nicotiana sylvestris]
          Length = 778

 Score =  226 bits (577), Expect = 3e-57
 Identities = 109/165 (66%), Positives = 135/165 (81%), Gaps = 1/165 (0%)
 Frame = -1

Query: 494 SSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACA 315
           SS KVFD +S KD FLWNS+IKA+FSNG Y+EA++ +S M   N +PNQFTIPIVVSACA
Sbjct: 79  SSKKVFDLISVKDPFLWNSIIKAYFSNGYYSEAIELYSNMRGFNALPNQFTIPIVVSACA 138

Query: 314 EVGSLCFGMNVHGMVTKLNLFYG-NSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAW 138
           E+G + +G  +HG+V+KLNLF+G N+AVGSS VYMYSKCG ME A+ VFDEI ++DVV+W
Sbjct: 139 ELGLISYGKRIHGLVSKLNLFHGNNAAVGSSLVYMYSKCGFMEHAADVFDEITVRDVVSW 198

Query: 137 TALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           TA++ G+V+NGESEKGLE L  MH+ G +  RPNFRTLEG FQAC
Sbjct: 199 TAIVKGYVENGESEKGLEYLCLMHKNGESEVRPNFRTLEGGFQAC 243



 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 53/163 (32%), Positives = 90/163 (55%)
 Frame = -1

Query: 491 SAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAE 312
           S +VF  ++ KD   WN+++ ++ S GK  EA   F KM + +  P   T+ I++SAC++
Sbjct: 489 SWRVFCTMADKDVVTWNTMMTSYISCGKITEAFGLFDKMIAESYKPTIATLLILLSACSQ 548

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           V SL  G  VH  + ++  F  N+ + ++   MY+KCG +  +  +FD +  KDV++W  
Sbjct: 549 VSSLDKGEKVHEYIKEVG-FEKNTLLATALTDMYAKCGQLTRSREIFDSMDKKDVISWNV 607

Query: 131 LIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           LI G+   GE++ G+E   +M +   +  +PN  T      AC
Sbjct: 608 LISGYAMYGEAKSGIEFFKQMEQ---SENKPNELTFLAVLSAC 647



 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
 Frame = -1

Query: 491 SAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWS---CNTMPNQFTIPIVVSA 321
           +A VFD ++ +D   W +++K +  NG+  + L++   M         PN  T+     A
Sbjct: 183 AADVFDEITVRDVVSWTAIVKGYVENGESEKGLEYLCLMHKNGESEVRPNFRTLEGGFQA 242

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           C  +G+L  G  +HG+  K   F  +  V  S + MYSKCG++E+    F E+  KD+ +
Sbjct: 243 CGNLGALVEGKCLHGLTVKSG-FCSHQVVQCSVLSMYSKCGSVEETYCSFCEVDEKDLFS 301

Query: 140 WTALIIGHVQNGESEKGLECLSE 72
           WT++I  + +        EC+ E
Sbjct: 302 WTSIIANYAK-------FECIGE 317


>ref|XP_011031040.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Populus euphratica]
          Length = 779

 Score =  224 bits (572), Expect = 1e-56
 Identities = 107/166 (64%), Positives = 133/166 (80%)
 Frame = -1

Query: 500 PHSSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSA 321
           PHSS  VFD  + KD+FLWNS+IK+HFSNG Y +A DF+ +M   NT PNQFTIP++V+ 
Sbjct: 80  PHSSTYVFDSTNKKDTFLWNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVAT 139

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           CAE+  L  G  +HG+V+K   F  NSAVGSSFVYMY+KCG MEDAS++FDEI+++DVV+
Sbjct: 140 CAELLWLEEGKYIHGLVSKSGFFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVS 199

Query: 140 WTALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           WTAL+IG+V N +SEKGLECL EMHRIGG+ E+ N RTLEG FQAC
Sbjct: 200 WTALVIGYVHNDDSEKGLECLCEMHRIGGDGEKVNSRTLEGGFQAC 245



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 50/153 (32%), Positives = 86/153 (56%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           +D   WN++I ++  +G +AEA+  F +M S    PN  T+ IV+SAC  + SL  G  V
Sbjct: 500 RDVVTWNTLISSYTHSGHHAEAITLFDEMISEKLNPNSATLVIVLSACGHLPSLEKGKMV 559

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  + K   F  N ++G++ V MY+KCG +E +  +F+ +  KDV++W  +I G+  +G+
Sbjct: 560 HQYI-KEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGD 618

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           +   +E   +M +   ++ +PN  T      AC
Sbjct: 619 ANSAMEVFQQMEQ---SNVKPNAITFLSLLSAC 648



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCN---TMPNQFTIPIVVSACAE 312
           +FD +  +D   W +++  +  N    + L+   +M          N  T+     AC  
Sbjct: 188 MFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMHRIGGDGEKVNSRTLEGGFQACGN 247

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           +G++  G  +HG+  K  L   + AV SS + MYSKCG +E+A   F +++ KDV +WT+
Sbjct: 248 LGAMIAGRCLHGLAVKTGLGCSH-AVQSSLLSMYSKCGNVEEAHKSFCQVVDKDVFSWTS 306

Query: 131 LI 126
           +I
Sbjct: 307 VI 308


>ref|XP_009370728.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial, partial [Pyrus x bretschneideri]
          Length = 762

 Score =  224 bits (572), Expect = 1e-56
 Identities = 114/166 (68%), Positives = 130/166 (78%)
 Frame = -1

Query: 500 PHSSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSA 321
           P SS KVF  +S KD+FLWNS+IK HFSNG Y++AL  F +M +    PNQFT+P+VVS+
Sbjct: 63  PTSSTKVFASVSPKDTFLWNSIIKTHFSNGGYSKALVLFFQMRASGFAPNQFTLPMVVSS 122

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           CAE+  L  G NVHG+  KL LF  NSAVGSSFVYMYSKCG MEDAS+VFDEI ++DVV 
Sbjct: 123 CAELMVLDHGNNVHGLGKKLGLFAINSAVGSSFVYMYSKCGRMEDASLVFDEITVRDVVC 182

Query: 140 WTALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           WTALIIG+V N ESEKGLECL EMHRIGG  ERPNFRTLE   QAC
Sbjct: 183 WTALIIGYVHNDESEKGLECLCEMHRIGGIGERPNFRTLEVGLQAC 228



 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 50/153 (32%), Positives = 84/153 (54%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           KD   WNS+I ++  +G   EA+D + KM + N +PN  T+  V+SAC+ + SL  G  V
Sbjct: 483 KDIITWNSLISSYTHDGHSFEAIDLYHKMIAENFLPNSATLVTVLSACSHLASLEEGKKV 542

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  + K      N ++ ++ V MY+KCG +E +  +F+ +  +DV++W  +I G+  +G 
Sbjct: 543 HCHI-KERCIGNNLSLATALVDMYAKCGELEKSRELFNSMEDRDVISWNVMISGYATHGR 601

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           +E  +E   EM     ++ +PN  T      AC
Sbjct: 602 AESAIELFHEME---DSNVKPNELTFLALLSAC 631



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 3/139 (2%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTM---PNQFTIPIVVSACAE 312
           VFD ++ +D   W ++I  +  N +  + L+   +M     +   PN  T+ + + AC  
Sbjct: 171 VFDEITVRDVVCWTALIIGYVHNDESEKGLECLCEMHRIGGIGERPNFRTLEVGLQACGY 230

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           +G+L  G  +HG V K  +   + AV S  + MYS+CG  E++ + F ++  KDV++WT+
Sbjct: 231 LGALVEGRCLHGFVVKRGIGC-SGAVKSLLLSMYSRCGRPEESYLSFCDVENKDVISWTS 289

Query: 131 LIIGHVQNGESEKGLECLS 75
           +I  + ++G  +   ECLS
Sbjct: 290 VIGVYARSGLMD---ECLS 305



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 40/161 (24%), Positives = 77/161 (47%)
 Frame = -1

Query: 485 KVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVG 306
           K+F  +  ++    N++I  +   G   + +  F KM       +  ++  VVS+C ++G
Sbjct: 375 KLFSGMQHQNKESCNTMIYGYGKLGLCTKCIQLFRKMRHQGIEADSNSLLSVVSSCFQMG 434

Query: 305 SLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALI 126
           ++  G ++H  + K+ +   N +V +S + MY K G +  A  +F  +  KD++ W +LI
Sbjct: 435 AIHLGRSLHCFIIKVCMDE-NVSVANSLIDMYGKSGYLTIARRIFS-VTQKDIITWNSLI 492

Query: 125 IGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
             +  +G S    E +   H++   +  PN  TL     AC
Sbjct: 493 SSYTHDGHS---FEAIDLYHKMIAENFLPNSATLVTVLSAC 530


>ref|XP_008234126.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Prunus mume]
          Length = 779

 Score =  223 bits (569), Expect = 3e-56
 Identities = 108/166 (65%), Positives = 130/166 (78%)
 Frame = -1

Query: 500 PHSSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSA 321
           P  S KVF  +  KD+FLWNS+IK HFSNG Y++ALDFF +M +    P QFT+P+VV++
Sbjct: 80  PTFSTKVFGSVCPKDTFLWNSIIKTHFSNGDYSKALDFFFQMRALGFAPTQFTLPMVVAS 139

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           CAE+  L  G NVHG+ +KL +F GNSAVGSSFVYMYSKCG MEDA  +F+E  ++DVV 
Sbjct: 140 CAELMLLEHGNNVHGLASKLGIFSGNSAVGSSFVYMYSKCGRMEDAYFMFEETTVRDVVC 199

Query: 140 WTALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           WTALIIG+VQN ESEKGLECL EMHR+GG+ ERPNFRTLE   QAC
Sbjct: 200 WTALIIGYVQNDESEKGLECLCEMHRVGGSDERPNFRTLEVGLQAC 245



 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 49/153 (32%), Positives = 83/153 (54%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           +D   WN++I ++   G  AEA+  F KM + N  PN  T+  V+SAC+ + SL  G  +
Sbjct: 500 RDIITWNTMISSYTHAGHSAEAIALFKKMIAVNFKPNSATLVTVLSACSHLASLGEGEKI 559

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  + +  L   N ++ ++ V MY+KCG +E +  +FD +  +DV++W  +I G+  +G 
Sbjct: 560 HSHIKERRLEI-NLSLATALVDMYAKCGQLEKSRELFDSMEERDVISWNVMISGYAMHGH 618

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           +E  LE   +M     ++ +PN  T      AC
Sbjct: 619 AEPALEIFRKME---NSNVKPNELTFLALLSAC 648



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 41/139 (29%), Positives = 76/139 (54%), Gaps = 3/139 (2%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMW---SCNTMPNQFTIPIVVSACAE 312
           +F+  + +D   W ++I  +  N +  + L+   +M      +  PN  T+ + + AC +
Sbjct: 188 MFEETTVRDVVCWTALIIGYVQNDESEKGLECLCEMHRVGGSDERPNFRTLEVGLQACGD 247

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           +G+L  G  +HG V K  +   + AV S  + MYS+CGA  ++ + F EI  KD+++WT+
Sbjct: 248 LGTLVEGKCLHGFVVKSGIGC-SEAVKSLLLSMYSRCGAPGESYLSFCEIKDKDLLSWTS 306

Query: 131 LIIGHVQNGESEKGLECLS 75
           +I  + ++G  +   ECLS
Sbjct: 307 VIGVYARSGLMD---ECLS 322


>ref|XP_002307076.2| pentatricopeptide repeat-containing family protein, partial
           [Populus trichocarpa] gi|550338333|gb|EEE94072.2|
           pentatricopeptide repeat-containing family protein,
           partial [Populus trichocarpa]
          Length = 744

 Score =  223 bits (568), Expect = 4e-56
 Identities = 107/166 (64%), Positives = 133/166 (80%)
 Frame = -1

Query: 500 PHSSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSA 321
           PHSS  VFD  + KD+FLWNS+IK+HFSNG Y +A DF+ +M   NT PNQFTIP++V+ 
Sbjct: 81  PHSSTYVFDSTNQKDTFLWNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVAT 140

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           CAE+  L  G  +HG+V+K  LF  NSAVGSSFVYMY+KCG MEDAS++FDEI+++DVV+
Sbjct: 141 CAELLWLEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVS 200

Query: 140 WTALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           WTAL+IG+V N +SEKGLECL EM RIGG+ E+ N RTLEG FQAC
Sbjct: 201 WTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQAC 246



 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 51/153 (33%), Positives = 86/153 (56%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           +D   WN++I ++  +G YAEA+  F +M S    PN  T+ IV+SAC  + SL  G  V
Sbjct: 465 RDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMV 524

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  + K   F  N ++G++ V MY+KCG +E +  +F+ +  KDV++W  +I G+  +G+
Sbjct: 525 HQYI-KEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGD 583

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           +   +E   +M +   ++ +PN  T      AC
Sbjct: 584 ANSAMEVFQQMEQ---SNVKPNAITFLSLLSAC 613



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCN---TMPNQFTIPIVVSACAE 312
           +FD +  +D   W +++  +  N    + L+   +M          N  T+     AC  
Sbjct: 189 MFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGN 248

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           +G++  G  +HG+  K  L   +  V SS + MYSKCG +E+A   F +++ KDV +WT+
Sbjct: 249 LGAMIAGRCLHGLAVKTGLGC-SQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTS 307

Query: 131 LI 126
           +I
Sbjct: 308 VI 309


>ref|XP_006353228.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Solanum tuberosum]
          Length = 761

 Score =  223 bits (567), Expect = 5e-56
 Identities = 109/164 (66%), Positives = 131/164 (79%)
 Frame = -1

Query: 494 SSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACA 315
           SS KVFDF++FKD FLWNS+IKA+FSNGKY E+L+ +S M   N +PNQFTIP+VVSACA
Sbjct: 63  SSRKVFDFINFKDPFLWNSIIKAYFSNGKYTESLELYSSMRGSNALPNQFTIPMVVSACA 122

Query: 314 EVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWT 135
           E+G +  GM VHG+V KLNLF GNSAVG+S V+MYSKCG ME AS VFDEI ++DVV+WT
Sbjct: 123 ELGLVEIGMGVHGLVLKLNLFDGNSAVGASLVFMYSKCGVMEYASDVFDEIPVRDVVSWT 182

Query: 134 ALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           A+I G+V+NG+S KGLE    M + G    RPNFRTLEG FQAC
Sbjct: 183 AIIKGYVENGQSGKGLEYFCLMCKNGEGEVRPNFRTLEGGFQAC 226



 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 52/163 (31%), Positives = 87/163 (53%)
 Frame = -1

Query: 491 SAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAE 312
           S +VF  ++ KD   WN+++ +  S GK AEA   F +M + +  PN  T+ I++SA ++
Sbjct: 472 SWRVFCMMTDKDVVTWNTMMTSSISCGKIAEAFGLFDEMRAESYKPNIATLVILLSASSQ 531

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           V SL  G  VH  + ++  F  N+ + ++   MY+KCG +  +  +FD +  KD+V+W  
Sbjct: 532 VSSLEKGEKVHQYIKEVE-FGKNTLLDTALTDMYAKCGQLTKSREIFDSMEKKDIVSWNV 590

Query: 131 LIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           LI G+   GE+   +E   +M +      +PN  T      AC
Sbjct: 591 LISGYAMYGEANYAIEMFKKMEQ---TKIKPNELTFLAVLSAC 630



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
 Frame = -1

Query: 491 SAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCN---TMPNQFTIPIVVSA 321
           ++ VFD +  +D   W ++IK +  NG+  + L++F  M         PN  T+     A
Sbjct: 166 ASDVFDEIPVRDVVSWTAIIKGYVENGQSGKGLEYFCLMCKNGEGEVRPNFRTLEGGFQA 225

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           C  +G+L  G   HG+  K   F     V SS + MYSKCG++E+    F E+  KD+++
Sbjct: 226 CGNLGALVEGKCFHGLAMKSG-FGCYQVVQSSVLLMYSKCGSVEETYSSFCEVDEKDLLS 284

Query: 140 WTALIIGHVQNGESEKGLECLSEM 69
           WT +I  + + G  ++ ++   +M
Sbjct: 285 WTVVIGVYAKYGCIDECIDMFLKM 308



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 40/154 (25%), Positives = 74/154 (48%)
 Frame = -1

Query: 485 KVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVG 306
           K+F+  + +++  WN +   ++ +G  A+ +D F  M       +  ++  V+S+C+ + 
Sbjct: 373 KIFNRGNGQNTEAWNVMAIGYWKDGLEAKCIDLFRDMQYLGVESDVNSLISVISSCSRLE 432

Query: 305 SLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALI 126
            L  G ++H  V K NL  GN +V +S + MY +   +  +  VF  +  KDVV W  ++
Sbjct: 433 KLRLGQSLHCHVIK-NLMLGNVSVSNSLIDMYGRSKNLTLSWRVFCMMTDKDVVTWNTMM 491

Query: 125 IGHVQNGESEKGLECLSEMHRIGGNSERPNFRTL 24
              +  G+  +      EM      S +PN  TL
Sbjct: 492 TSSISCGKIAEAFGLFDEMR---AESYKPNIATL 522


>ref|XP_007207635.1| hypothetical protein PRUPE_ppa021864mg [Prunus persica]
           gi|462403277|gb|EMJ08834.1| hypothetical protein
           PRUPE_ppa021864mg [Prunus persica]
          Length = 748

 Score =  221 bits (563), Expect = 1e-55
 Identities = 108/166 (65%), Positives = 128/166 (77%)
 Frame = -1

Query: 500 PHSSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSA 321
           P  S KVF  +  KD+FLWNS+IK HFSNG Y++ALDFF +M +    P QFT+P+VV++
Sbjct: 80  PTFSTKVFGSVCPKDTFLWNSIIKTHFSNGDYSKALDFFFQMRALGFAPTQFTLPMVVAS 139

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           CAE+  L  G NVHG+  KL LF GNSAVGSSFVYMYSKCG MEDA  +F+E  ++DVV 
Sbjct: 140 CAELMLLEHGNNVHGLALKLGLFSGNSAVGSSFVYMYSKCGRMEDAYFMFEETTVRDVVC 199

Query: 140 WTALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           WTALIIG+VQN E EKGLECL EMHR+GG+ ERPNFRTLE   QAC
Sbjct: 200 WTALIIGYVQNDEIEKGLECLCEMHRVGGSDERPNFRTLEVGLQAC 245



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 49/153 (32%), Positives = 83/153 (54%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           +D   WN++I ++   G  AEA+  F KM + N  PN  T+  V+SAC+ + SL  G  +
Sbjct: 469 RDIITWNTMISSYTHAGHSAEAIALFEKMIAVNFKPNSATLVTVLSACSHLASLGEGEKI 528

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  + +  L   N ++ ++ V MY+KCG +E +  +FD +  +DV++W  +I G+  +G 
Sbjct: 529 HSHIKERRLEI-NLSLATALVDMYAKCGQLEKSRELFDSMEERDVISWNVMISGYATHGH 587

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           +E  LE   +M     ++ +PN  T      AC
Sbjct: 588 AEPALEIFRKME---NSNIKPNELTFLALLSAC 617



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 40/139 (28%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMW---SCNTMPNQFTIPIVVSACAE 312
           +F+  + +D   W ++I  +  N +  + L+   +M      +  PN  T+ + + AC +
Sbjct: 188 MFEETTVRDVVCWTALIIGYVQNDEIEKGLECLCEMHRVGGSDERPNFRTLEVGLQACGD 247

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           +G+L  G  +HG V K  +   + AV S  + MYS+CG   ++ + F EI  KD+++WT+
Sbjct: 248 LGTLVEGKCLHGFVVKSGIGC-SEAVKSLLLSMYSRCGVPGESYLSFCEIKDKDLLSWTS 306

Query: 131 LIIGHVQNGESEKGLECLS 75
           +I  + ++G  +   ECLS
Sbjct: 307 VIGVYARSGLMD---ECLS 322


>ref|XP_007047919.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508700180|gb|EOX92076.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 784

 Score =  219 bits (558), Expect = 5e-55
 Identities = 111/169 (65%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
 Frame = -1

Query: 500 PHSSAKVFDFLSF--KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVV 327
           PH S KVFD LS   KD+FLWNS+IK+HFSNG YAE+ ++  KM   NT PN FTIP+V 
Sbjct: 82  PHFSTKVFDSLSIPAKDTFLWNSIIKSHFSNGNYAESFEYHLKMRLHNTPPNDFTIPMVA 141

Query: 326 SACAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDV 147
           SACAE+     G  VHG+  K  LF  NSAVGSSFVYMY+KCG+M DA +VFDEI++KDV
Sbjct: 142 SACAELRWEGCGKYVHGLTLKFGLFAENSAVGSSFVYMYAKCGSMGDACLVFDEIIVKDV 201

Query: 146 VAWTALIIGHVQNGESEKGLECLSEMHRIGGNSE-RPNFRTLEGCFQAC 3
           VAWTAL+IG+VQNGESEK L+ L +MHR+GG+ E RPNFRTLEG  QAC
Sbjct: 202 VAWTALVIGYVQNGESEKALKRLRDMHRVGGDGEKRPNFRTLEGGLQAC 250



 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 43/153 (28%), Positives = 83/153 (54%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           +D   WN+++ A+   G ++EA+  F +M S N  PN  T+  V+SAC+ + S   G  +
Sbjct: 505 RDIITWNTMMSAYTRCGHFSEAIALFDQMISGNLTPNLATLLTVLSACSHLASWEKGEII 564

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  + +       S + ++ + MY+KCG +E++  +F+ +  KD V+W  +I G+  +G+
Sbjct: 565 HCYIKEEGYELCQS-LATALIDMYAKCGQLENSRELFNSMKEKDAVSWNVMISGYGMHGD 623

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           ++  LE   +M +   ++ +PN  T      +C
Sbjct: 624 AKSALEIYQQMEK---SNVKPNALTFLSLLNSC 653



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCN----TMPNQFTIPIVVSACA 315
           VFD +  KD   W +++  +  NG+  +AL     M          PN  T+   + AC 
Sbjct: 192 VFDEIIVKDVVAWTALVIGYVQNGESEKALKRLRDMHRVGGDGEKRPNFRTLEGGLQACG 251

Query: 314 EVGSLCFGMNVHGMVTKLNL-FYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAW 138
            + +L  G  +HG V K  L FY    V SS + MYS+CG++ D+   F E++ KD+++W
Sbjct: 252 SLCALYEGKCLHGFVVKTGLGFY--PVVQSSILSMYSRCGSVGDSYASFSEVVHKDIISW 309

Query: 137 TALIIGHVQNGESEKGLECLSEM 69
           T++I  + + G  ++ L+ +S+M
Sbjct: 310 TSIIGVYARFGFLKECLDLISKM 332



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 40/149 (26%), Positives = 68/149 (45%)
 Frame = -1

Query: 479 FDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSL 300
           F  +  KD   W S+I  +   G   E LD  SKM       +   I  +V       S+
Sbjct: 298 FSEVVHKDIISWTSIIGVYARFGFLKECLDLISKMQVDGLCADGILISSIVLGFGNFMSV 357

Query: 299 CFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIG 120
           C G   HG++ + N F  +  V ++ + MY K G +  A  +F  I   +  +W  ++ G
Sbjct: 358 CDGKAFHGLLIRRN-FLLDQIVHNALLSMYCKFGLLSIAEKLFGIIPNCNKESWNIMVSG 416

Query: 119 HVQNGESEKGLECLSEMHRIGGNSERPNF 33
           + +NG+ E+ +E   EM  +G  ++  +F
Sbjct: 417 YCKNGQEEQSIELFREMQHLGIETDLNSF 445



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 36/161 (22%), Positives = 77/161 (47%)
 Frame = -1

Query: 485 KVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVG 306
           K+F  +   +   WN ++  +  NG+  ++++ F +M       +  +   V+ +C+E+G
Sbjct: 397 KLFGIIPNCNKESWNIMVSGYCKNGQEEQSIELFREMQHLGIETDLNSFVSVIFSCSELG 456

Query: 305 SLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALI 126
           ++  G ++H  + K +    N  + +S + MY K G +  A  +F++   +D++ W  ++
Sbjct: 457 AIRIGHSLHCNIVK-SYMVDNITIANSLIDMYGKNGNLTIAWRIFNQ-TQRDIITWNTMM 514

Query: 125 IGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
             + + G   + +    +M  I GN   PN  TL     AC
Sbjct: 515 SAYTRCGHFSEAIALFDQM--ISGNL-TPNLATLLTVLSAC 552


>ref|XP_004250511.2| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Solanum lycopersicum]
          Length = 761

 Score =  218 bits (556), Expect = 9e-55
 Identities = 109/164 (66%), Positives = 129/164 (78%)
 Frame = -1

Query: 494 SSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACA 315
           SS KVFDF++FKD FLWNS+IKA+FSNGKY E+L+F+S M   N +PNQFTIP+VVSACA
Sbjct: 63  SSRKVFDFINFKDPFLWNSIIKAYFSNGKYTESLEFYSGMRCFNALPNQFTIPMVVSACA 122

Query: 314 EVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWT 135
           E+G +  GM VHG+V KLNLF GNSAVG+S VYMYSKCG M  A  VFDE+ ++DVV+WT
Sbjct: 123 ELGLVEIGMGVHGLVLKLNLFDGNSAVGASLVYMYSKCGVMGYACDVFDEMPVRDVVSWT 182

Query: 134 ALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           A+I G V+NGES KGLE    M + G    RPNFRTLEG FQAC
Sbjct: 183 AIIKGCVENGESGKGLEYFCLMCKNGEGEVRPNFRTLEGGFQAC 226



 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 51/163 (31%), Positives = 86/163 (52%)
 Frame = -1

Query: 491 SAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAE 312
           S +VF  ++ KD   WN+++ ++ S G  AEA   F +M + +  PN  T+ I++SA ++
Sbjct: 472 SWRVFCMMTDKDVVTWNTMMTSYISCGNIAEAFGLFDEMRAESYKPNIATLVILLSASSQ 531

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           V SL  G  VH  + ++  F  N+ + ++   MY+KCG +  +  +FD +  KD+V+W  
Sbjct: 532 VSSLEKGEKVHQYIKEVG-FGNNTLLDTALTDMYAKCGQLTKSREIFDSMEKKDIVSWNV 590

Query: 131 LIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           LI G+   GE+   +E    M +      +PN  T      AC
Sbjct: 591 LISGYAMYGEANDAIEMFKNMEQ---TEIKPNELTFLAVLSAC 630



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCN---TMPNQFTIPIVVSACAE 312
           VFD +  +D   W ++IK    NG+  + L++F  M         PN  T+     AC  
Sbjct: 169 VFDEMPVRDVVSWTAIIKGCVENGESGKGLEYFCLMCKNGEGEVRPNFRTLEGGFQACGN 228

Query: 311 VGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTA 132
           +G+L  G   HG+  K    Y +  V SS + MYSKCG++E+    F E+  KD+ +WT 
Sbjct: 229 LGALVEGKCFHGLGMKTGFGY-HQVVQSSVLLMYSKCGSVEETYRSFCEVDEKDLFSWTV 287

Query: 131 LI 126
           +I
Sbjct: 288 VI 289



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 38/154 (24%), Positives = 71/154 (46%)
 Frame = -1

Query: 485 KVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVG 306
           K+F+  + +++  WN +   ++  G  A  +D F  M       +  ++  V+S+C+ + 
Sbjct: 373 KIFNGGNEQNTEAWNVMTIGYWKAGLEANCIDLFRDMQYLGMESDVNSLISVISSCSRLE 432

Query: 305 SLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALI 126
               G ++H  + K NL  GN +V +S + MY +   +  +  VF  +  KDVV W  ++
Sbjct: 433 KFRLGESLHCHIIK-NLMLGNVSVANSLIDMYGRRKNLTLSWRVFCMMTDKDVVTWNTMM 491

Query: 125 IGHVQNGESEKGLECLSEMHRIGGNSERPNFRTL 24
             ++  G   +      EM      S +PN  TL
Sbjct: 492 TSYISCGNIAEAFGLFDEMR---AESYKPNIATL 522


>ref|XP_010025438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Eucalyptus grandis]
           gi|702450113|ref|XP_010025439.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Eucalyptus grandis]
           gi|702450120|ref|XP_010025440.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Eucalyptus grandis]
           gi|702450126|ref|XP_010025441.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Eucalyptus grandis]
           gi|702450130|ref|XP_010025442.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Eucalyptus grandis]
          Length = 778

 Score =  216 bits (551), Expect = 4e-54
 Identities = 104/165 (63%), Positives = 131/165 (79%)
 Frame = -1

Query: 500 PHSSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSA 321
           P  S +VFD +  KD FLWNS++K HFSNG  + A++F+S+M + N +P+QFTIP+VV+A
Sbjct: 76  PTCSTRVFDRVEAKDVFLWNSIVKTHFSNGACSRAIEFYSRMRAANELPDQFTIPMVVAA 135

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           CA++GSL +GM VH +  K  LF G+SAVGSSFVYMYSKCG M DAS+VFDEI ++DVVA
Sbjct: 136 CADIGSLNYGMWVHALACKCGLFAGSSAVGSSFVYMYSKCGQMMDASLVFDEIRVRDVVA 195

Query: 140 WTALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQA 6
           WTAL+IG+VQN E+EK L  L EM R+GG  ERPNFRT+EG FQA
Sbjct: 196 WTALLIGYVQNRENEKALWSLREMLRLGGLEERPNFRTMEGGFQA 240



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 44/153 (28%), Positives = 79/153 (51%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           +D+  WN+VI ++  N  Y  A+  F +M S    PN  T+  V++A A + S   G  +
Sbjct: 499 RDTVSWNAVISSYVHNKHYEGAIALFDRMVSEEMKPNSATLVSVLAASANLASSEKGERI 558

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  + +  +   N  + ++ V+MY+KCG ++ A  +FD +  +D+++W  +I G+  +G 
Sbjct: 559 HQYLEE-EMIETNLPLTTALVHMYAKCGKLDKARELFDLMNERDIISWNVMISGYGMHGH 617

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           ++  +E    M     +  RPN  T  G   AC
Sbjct: 618 AKSAVEIFQLME---NSKVRPNALTFLGLLSAC 647


>ref|XP_010087614.1| hypothetical protein L484_022141 [Morus notabilis]
           gi|587838780|gb|EXB29469.1| hypothetical protein
           L484_022141 [Morus notabilis]
          Length = 778

 Score =  216 bits (549), Expect = 6e-54
 Identities = 106/166 (63%), Positives = 127/166 (76%)
 Frame = -1

Query: 500 PHSSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSA 321
           P +S  VF  +  KD+FLWNSVIKAHFSNG + EAL  F +M +   +PNQFT+P+VV +
Sbjct: 79  PTNSTLVFYSIHPKDTFLWNSVIKAHFSNGDFQEALYLFLRMRASGFVPNQFTLPMVVGS 138

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           CA++  L  G + HG+V KL L  G++  GSSFVYMY KCG M DA  VFDEI ++DVV+
Sbjct: 139 CADLMLLDCGKSFHGLVLKLGLLSGDNVAGSSFVYMYCKCGQMGDAYKVFDEITVRDVVS 198

Query: 140 WTALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           WTAL+IG+VQNGESEKGLECL EMHR GG SERPNFRTLEG FQAC
Sbjct: 199 WTALVIGYVQNGESEKGLECLCEMHRSGGESERPNFRTLEGGFQAC 244



 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 49/153 (32%), Positives = 83/153 (54%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           KD   WN++I  +   G++ EA+  F KM S N  PN  T+ +V+S C+ + SL  G  V
Sbjct: 499 KDVVTWNTIISCYIHCGQFEEAIALFDKMISENLYPNSATLAMVLSTCSHLASLDKGEKV 558

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  + +  L   N ++G++ V MY+KCG +E +  +F+ +  KDV++W  +I G+  +G+
Sbjct: 559 HHHIKERGLEI-NLSLGTALVDMYAKCGQLEQSRGLFNSMTEKDVISWNVMISGYGMHGD 617

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           +E  ++   +M     +   PN  T      AC
Sbjct: 618 AESAIQIFQDME---NSDVIPNELTFLALLLAC 647



 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
 Frame = -1

Query: 485 KVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSC---NTMPNQFTIPIVVSACA 315
           KVFD ++ +D   W +++  +  NG+  + L+   +M      +  PN  T+     AC 
Sbjct: 186 KVFDEITVRDVVSWTALVIGYVQNGESEKGLECLCEMHRSGGESERPNFRTLEGGFQACG 245

Query: 314 EVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWT 135
            +G+L  G  +HG+V K  L   + AV SS + MYSKCG   +A   F E+  KD+++W 
Sbjct: 246 NMGALAEGRCLHGLVVKTGLG-SSEAVKSSILSMYSKCGTPVEARFSFCEVTNKDLLSWM 304

Query: 134 ALIIGHVQNGESEKGLECLSEMHRIGG 54
           ++I  + + G   + L    EM +IGG
Sbjct: 305 SVIGVYTRFGLMNECLNLFQEM-QIGG 330


>ref|XP_008382134.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Malus domestica]
          Length = 780

 Score =  214 bits (546), Expect = 1e-53
 Identities = 107/166 (64%), Positives = 126/166 (75%)
 Frame = -1

Query: 500 PHSSAKVFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSA 321
           P  S K+F  +S KD+FLWNS+IK HFSN  Y++ALDFF +M      PNQFT+P+VV++
Sbjct: 81  PTFSTKLFASVSPKDTFLWNSIIKTHFSNXNYSKALDFFFQMRXSGFSPNQFTLPMVVAS 140

Query: 320 CAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVA 141
           CAE+  L  G +VHG+  KL  F GNSAVGSSFV MYSKCG MEDAS+ FDEI ++DVV 
Sbjct: 141 CAELMLLDHGSSVHGLAKKLGNFAGNSAVGSSFVXMYSKCGRMEDASLXFDEITVRDVVC 200

Query: 140 WTALIIGHVQNGESEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           WTALIIG+VQN E EKGLE L EMHR+GG  ERPNFRTLE   QAC
Sbjct: 201 WTALIIGYVQNDEGEKGLEYLCEMHRVGGIGERPNFRTLEVGLQAC 246



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 52/153 (33%), Positives = 84/153 (54%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           KD   WNS+I +H  NG Y EA+  F KM + N MPN  T+  V+SAC+ + SL  G  V
Sbjct: 501 KDIITWNSLISSHTHNGHYFEAIALFHKMIAENFMPNSATLVTVLSACSHLASLEEGKKV 560

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  + + +L   N ++ ++ V MY+KCG +E +  + + +  +DV++W  +I G+  +G 
Sbjct: 561 HCYIKERHLEI-NLSLATALVDMYAKCGQLEKSRELXNSMEDRDVISWNVMISGYATHGH 619

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
            E  ++   EM  +   + +PN  T      AC
Sbjct: 620 XESAIKLFHEMEDL---NVKPNELTFLALLSAC 649



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
 Frame = -1

Query: 479 FDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTM---PNQFTIPIVVSACAEV 309
           FD ++ +D   W ++I  +  N +  + L++  +M     +   PN  T+ + + AC  +
Sbjct: 190 FDEITVRDVVCWTALIIGYVQNDEGEKGLEYLCEMHRVGGIGERPNFRTLEVGLQACGXL 249

Query: 308 GSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTAL 129
           G+L  G  +HG V K         V S  + MYS+CG  E++ + F +   KDV++WT++
Sbjct: 250 GALVEGRCLHGFVVKSGTGCSXD-VKSLLLSMYSRCGTPEESYLSFCDXZNKDVISWTSV 308

Query: 128 IIGHVQNGESEKGLECLSEM 69
           I  + ++G   + L    EM
Sbjct: 309 IGVYARSGLMTECLSLFREM 328


>ref|XP_012489272.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Gossypium raimondii]
           gi|823184664|ref|XP_012489273.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Gossypium raimondii]
           gi|823184667|ref|XP_012489274.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Gossypium raimondii]
           gi|823184670|ref|XP_012489275.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Gossypium raimondii]
           gi|823184673|ref|XP_012489276.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Gossypium raimondii]
           gi|823184676|ref|XP_012489277.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Gossypium raimondii]
           gi|823184679|ref|XP_012489278.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Gossypium raimondii]
           gi|823184682|ref|XP_012489279.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Gossypium raimondii]
           gi|763773244|gb|KJB40367.1| hypothetical protein
           B456_007G060400 [Gossypium raimondii]
           gi|763773245|gb|KJB40368.1| hypothetical protein
           B456_007G060400 [Gossypium raimondii]
           gi|763773246|gb|KJB40369.1| hypothetical protein
           B456_007G060400 [Gossypium raimondii]
           gi|763773247|gb|KJB40370.1| hypothetical protein
           B456_007G060400 [Gossypium raimondii]
          Length = 785

 Score =  213 bits (543), Expect = 3e-53
 Identities = 107/169 (63%), Positives = 133/169 (78%), Gaps = 3/169 (1%)
 Frame = -1

Query: 500 PHSSAKVFDFLSF--KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVV 327
           P+ S KVFD L    KD FLWNSVIK+HFSNG Y+E+  ++ KM   NT+PN FT+P+VV
Sbjct: 83  PNCSTKVFDSLPTPKKDVFLWNSVIKSHFSNGNYSESFAYYLKMRLSNTLPNDFTVPMVV 142

Query: 326 SACAEVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDV 147
           SACAE+     G  VHG+V K +LF  +SAVGSSFV+MY+KCG+M DA +VFDE+++KDV
Sbjct: 143 SACAELRWDVCGRYVHGLVLKSSLFVLSSAVGSSFVFMYAKCGSMGDAHLVFDEMIVKDV 202

Query: 146 VAWTALIIGHVQNGESEKGLECLSEMHRIGGNSE-RPNFRTLEGCFQAC 3
           VAWTAL+IG VQNG+SEKGLECL +MHR+  + + RPNFRTLEG FQAC
Sbjct: 203 VAWTALVIGCVQNGQSEKGLECLRDMHRVARDGDTRPNFRTLEGGFQAC 251



 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 45/153 (29%), Positives = 80/153 (52%)
 Frame = -1

Query: 461 KDSFLWNSVIKAHFSNGKYAEALDFFSKMWSCNTMPNQFTIPIVVSACAEVGSLCFGMNV 282
           +D   WN+++ A+   G ++EA+  F +M   N MP+  T+  VVSAC+ + S   G  +
Sbjct: 506 RDVITWNTMMSAYTCCGHFSEAIALFDQMLLGNLMPDLATLLTVVSACSHLASWEKGERI 565

Query: 281 HGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWTALIIGHVQNGE 102
           H  + +       S V ++ + MY+KCG +E +  +F  I  KDVV+W  +I G+  +G+
Sbjct: 566 HCYIKEGGYELCQSLV-TALIDMYAKCGQIEKSRELFMLIEEKDVVSWNVMISGYAMHGD 624

Query: 101 SEKGLECLSEMHRIGGNSERPNFRTLEGCFQAC 3
           ++  L+   +M     +  +PN  T      +C
Sbjct: 625 AKSALQIFQQMEE---SKAKPNDLTFLSLLNSC 654



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
 Frame = -1

Query: 482 VFDFLSFKDSFLWNSVIKAHFSNGKYAEALDFFSKMWSC----NTMPNQFTIPIVVSACA 315
           VFD +  KD   W +++     NG+  + L+    M       +T PN  T+     ACA
Sbjct: 193 VFDEMIVKDVVAWTALVIGCVQNGQSEKGLECLRDMHRVARDGDTRPNFRTLEGGFQACA 252

Query: 314 EVGSLCFGMNVHGMVTKLNLFYGNSAVGSSFVYMYSKCGAMEDASVVFDEILMKDVVAWT 135
            + +L  G  +HG V K  L + N  V SS + MYS+CG++ED+   F E++ KDV++WT
Sbjct: 253 NLCALDEGKCLHGFVVKTGLGF-NPLVQSSILSMYSRCGSVEDSYASFSEVVDKDVISWT 311

Query: 134 ALIIGHVQNGESEKGLECLSEM 69
           ++I  + + G  ++ L+   EM
Sbjct: 312 SIIGVNARFGLMKECLDIFWEM 333