BLASTX nr result
ID: Forsythia23_contig00041766
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00041766
(511 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AJT36696.1| Ycf1, partial (chloroplast) [Syringa oblata] 47 4e-09
gb|AJT36877.1| Ycf1, partial (chloroplast) [Fraxinus hupehensis] 47 6e-09
gb|AJT36875.1| Ycf1, partial (chloroplast) [Fraxinus sp. BOP010234] 47 6e-09
gb|AJT36866.1| Ycf1, partial (chloroplast) [Fraxinus baroniana] ... 47 6e-09
gb|AJT36786.1| Ycf1, partial (chloroplast) [Fraxinus mandshurica] 47 6e-09
gb|AJT36755.1| Ycf1, partial (chloroplast) [Fraxinus paxiana] gi... 47 6e-09
gb|AJT36695.1| Ycf1, partial (chloroplast) [Syringa oblata] 47 6e-09
gb|AJT36876.1| Ycf1, partial (chloroplast) [Fraxinus excelsior v... 47 8e-09
gb|AJT36910.1| Ycf1, partial (chloroplast) [Forsythia suspensa] 48 8e-09
gb|AJT36913.1| Ycf1, partial (chloroplast) [Ligustrum sp. BOP010... 47 8e-09
gb|AJT36915.1| Ycf1, partial (chloroplast) [Ligustrum sinense] 47 8e-09
gb|AJT36754.1| Ycf1, partial (chloroplast) [Ligustrum lucidum] 47 8e-09
gb|AJT36936.1| Ycf1, partial (chloroplast) [Ligustrum quihoui] 47 8e-09
gb|AJT36914.1| Ycf1, partial (chloroplast) [Ligustrum x vicaryi] 47 8e-09
emb|CBR23797.1| Ycf1 protein [Olea europaea subsp. cuspidata] 47 1e-08
ref|YP_004563839.1| Ycf1 protein [Olea europaea subsp. cuspidata... 47 1e-08
ref|YP_004564555.1| Ycf1 protein [Olea europaea subsp. maroccana... 47 1e-08
ref|YP_004564062.1| Ycf1 protein [Olea woodiana subsp. woodiana]... 47 1e-08
ref|YP_004376479.1| Ycf1 protein [Olea europaea subsp. europaea]... 47 1e-08
ref|YP_003359417.2| Ycf1 (chloroplast) [Olea europaea] gi|291059... 47 1e-08
>gb|AJT36696.1| Ycf1, partial (chloroplast) [Syringa oblata]
Length = 289
Score = 47.0 bits (110), Expect(2) = 4e-09
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEK+ IN I GI+LPDTDY ++E
Sbjct: 113 KKTSIDNFIEKVGINRIHGIVLPDTDYHKTE 143
Score = 40.4 bits (93), Expect(2) = 4e-09
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIKK 302
Y PFLNGP RTI KSLSPSIIK+
Sbjct: 89 YDPFLNGPYRRTITKSLSPSIIKR 112
>gb|AJT36877.1| Ycf1, partial (chloroplast) [Fraxinus hupehensis]
Length = 291
Score = 47.0 bits (110), Expect(2) = 6e-09
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEK+ IN I GI+LPDTDY++ E
Sbjct: 112 KKTSIDNFIEKVGINQIHGIVLPDTDYQKIE 142
Score = 39.7 bits (91), Expect(2) = 6e-09
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KSLSPSIIK
Sbjct: 88 YDPFLNGPYRRTITKSLSPSIIK 110
>gb|AJT36875.1| Ycf1, partial (chloroplast) [Fraxinus sp. BOP010234]
Length = 291
Score = 47.0 bits (110), Expect(2) = 6e-09
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEK+ IN I GI+LPDTDY++ E
Sbjct: 112 KKTSIDNFIEKVGINQIHGIVLPDTDYQKIE 142
Score = 39.7 bits (91), Expect(2) = 6e-09
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KSLSPSIIK
Sbjct: 88 YDPFLNGPYRRTITKSLSPSIIK 110
>gb|AJT36866.1| Ycf1, partial (chloroplast) [Fraxinus baroniana]
gi|766946219|gb|AJT36870.1| Ycf1, partial (chloroplast)
[Fraxinus sp. BOP010228] gi|766946221|gb|AJT36871.1|
Ycf1, partial (chloroplast) [Fraxinus bungeana]
gi|766946225|gb|AJT36873.1| Ycf1, partial (chloroplast)
[Fraxinus chinensis subsp. rhynchophylla]
Length = 291
Score = 47.0 bits (110), Expect(2) = 6e-09
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEK+ IN I GI+LPDTDY++ E
Sbjct: 112 KKTSIDNFIEKVGINQIHGIVLPDTDYQKIE 142
Score = 39.7 bits (91), Expect(2) = 6e-09
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KSLSPSIIK
Sbjct: 88 YDPFLNGPYRRTITKSLSPSIIK 110
>gb|AJT36786.1| Ycf1, partial (chloroplast) [Fraxinus mandshurica]
Length = 291
Score = 47.0 bits (110), Expect(2) = 6e-09
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEK+ IN I GI+LPDTDY++ E
Sbjct: 112 KKTSIDNFIEKVGINQIHGIVLPDTDYQKIE 142
Score = 39.7 bits (91), Expect(2) = 6e-09
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KSLSPSIIK
Sbjct: 88 YDPFLNGPYRRTITKSLSPSIIK 110
>gb|AJT36755.1| Ycf1, partial (chloroplast) [Fraxinus paxiana]
gi|766946215|gb|AJT36868.1| Ycf1, partial (chloroplast)
[Fraxinus velutina] gi|766946227|gb|AJT36874.1| Ycf1,
partial (chloroplast) [Fraxinus pennsylvanica]
gi|766946235|gb|AJT36878.1| Ycf1, partial (chloroplast)
[Fraxinus americana] gi|766946241|gb|AJT36881.1| Ycf1,
partial (chloroplast) [Fraxinus pennsylvanica var.
subintegerrima]
Length = 291
Score = 47.0 bits (110), Expect(2) = 6e-09
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEK+ IN I GI+LPDTDY++ E
Sbjct: 112 KKTSIDNFIEKVGINQIHGIVLPDTDYQKIE 142
Score = 39.7 bits (91), Expect(2) = 6e-09
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KSLSPSIIK
Sbjct: 88 YDPFLNGPYRRTITKSLSPSIIK 110
>gb|AJT36695.1| Ycf1, partial (chloroplast) [Syringa oblata]
Length = 289
Score = 47.0 bits (110), Expect(2) = 6e-09
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEK+ IN I GI+LPDTDY ++E
Sbjct: 113 KKTSIDNFIEKVGINRIHGIVLPDTDYHKTE 143
Score = 39.7 bits (91), Expect(2) = 6e-09
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KSLSPSIIK
Sbjct: 89 YDPFLNGPYRRTITKSLSPSIIK 111
>gb|AJT36876.1| Ycf1, partial (chloroplast) [Fraxinus excelsior var. aurea]
Length = 291
Score = 46.6 bits (109), Expect(2) = 8e-09
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEK+ IN I GI+LPDTDY++ E
Sbjct: 112 KKTSIDNFIEKVGINRIHGIVLPDTDYQKIE 142
Score = 39.7 bits (91), Expect(2) = 8e-09
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KSLSPSIIK
Sbjct: 88 YDPFLNGPYRRTITKSLSPSIIK 110
>gb|AJT36910.1| Ycf1, partial (chloroplast) [Forsythia suspensa]
Length = 283
Score = 48.1 bits (113), Expect(2) = 8e-09
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEKI IN I GILLPDTDY++ E
Sbjct: 105 KKTSIDNFIEKIGINRIHGILLPDTDYQKFE 135
Score = 38.1 bits (87), Expect(2) = 8e-09
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KS SPSIIK
Sbjct: 81 YDPFLNGPYRRTITKSFSPSIIK 103
>gb|AJT36913.1| Ycf1, partial (chloroplast) [Ligustrum sp. BOP010277]
Length = 268
Score = 46.6 bits (109), Expect(2) = 8e-09
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEK+ IN I GI+LPDTDY ++E
Sbjct: 105 QKTSIDNFIEKVGINRIHGIVLPDTDYHKTE 135
Score = 39.7 bits (91), Expect(2) = 8e-09
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KSLSPSIIK
Sbjct: 81 YDPFLNGPYRRTITKSLSPSIIK 103
>gb|AJT36915.1| Ycf1, partial (chloroplast) [Ligustrum sinense]
Length = 267
Score = 46.6 bits (109), Expect(2) = 8e-09
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEK+ IN I GI+LPDTDY ++E
Sbjct: 105 QKTSIDNFIEKVGINRIHGIVLPDTDYHKTE 135
Score = 39.7 bits (91), Expect(2) = 8e-09
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KSLSPSIIK
Sbjct: 81 YDPFLNGPYRRTITKSLSPSIIK 103
>gb|AJT36754.1| Ycf1, partial (chloroplast) [Ligustrum lucidum]
Length = 267
Score = 46.6 bits (109), Expect(2) = 8e-09
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEK+ IN I GI+LPDTDY ++E
Sbjct: 105 QKTSIDNFIEKVGINRIHGIVLPDTDYHKTE 135
Score = 39.7 bits (91), Expect(2) = 8e-09
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KSLSPSIIK
Sbjct: 81 YDPFLNGPYRRTITKSLSPSIIK 103
>gb|AJT36936.1| Ycf1, partial (chloroplast) [Ligustrum quihoui]
Length = 261
Score = 46.6 bits (109), Expect(2) = 8e-09
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEK+ IN I GI+LPDTDY ++E
Sbjct: 105 QKTSIDNFIEKVGINRIHGIVLPDTDYHKTE 135
Score = 39.7 bits (91), Expect(2) = 8e-09
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KSLSPSIIK
Sbjct: 81 YDPFLNGPYRRTITKSLSPSIIK 103
>gb|AJT36914.1| Ycf1, partial (chloroplast) [Ligustrum x vicaryi]
Length = 231
Score = 46.6 bits (109), Expect(2) = 8e-09
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESE 214
+K SIDNFIEK+ IN I GI+LPDTDY ++E
Sbjct: 105 QKTSIDNFIEKVGINRIHGIVLPDTDYHKTE 135
Score = 39.7 bits (91), Expect(2) = 8e-09
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KSLSPSIIK
Sbjct: 81 YDPFLNGPYRRTITKSLSPSIIK 103
>emb|CBR23797.1| Ycf1 protein [Olea europaea subsp. cuspidata]
Length = 1876
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESEH-YKNYEVPCVSIHVV-FLDILTQL 145
+K SIDNFIEK+ IN I GI+LPDTDY++ E ++ +S +V FL + +L
Sbjct: 531 KKTSIDNFIEKVGINRIHGIILPDTDYQKIEQKIDRFDKKPLSTEIVDFLTFINEL 586
Score = 38.5 bits (88), Expect(2) = 1e-08
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KS+SPSIIK
Sbjct: 507 YDPFLNGPYRRTITKSVSPSIIK 529
>ref|YP_004563839.1| Ycf1 protein [Olea europaea subsp. cuspidata]
gi|334085008|emb|CBJ04356.1| Ycf1 protein [Olea europaea
subsp. cuspidata]
Length = 1876
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESEH-YKNYEVPCVSIHVV-FLDILTQL 145
+K SIDNFIEK+ IN I GI+LPDTDY++ E ++ +S +V FL + +L
Sbjct: 531 KKTSIDNFIEKVGINRIHGIILPDTDYQKIEQKIDRFDKKPLSTEIVDFLTFINEL 586
Score = 38.5 bits (88), Expect(2) = 1e-08
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KS+SPSIIK
Sbjct: 507 YDPFLNGPYRRTITKSVSPSIIK 529
>ref|YP_004564555.1| Ycf1 protein [Olea europaea subsp. maroccana]
gi|334084922|emb|CBS29308.1| Ycf1 protein [Olea europaea
subsp. maroccana]
Length = 1876
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESEH-YKNYEVPCVSIHVV-FLDILTQL 145
+K SIDNFIEK+ IN I GI+LPDTDY++ E ++ +S +V FL + +L
Sbjct: 531 KKTSIDNFIEKVGINRIHGIILPDTDYQKIEQKIDRFDKKPLSTEIVDFLTFINEL 586
Score = 38.5 bits (88), Expect(2) = 1e-08
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KS+SPSIIK
Sbjct: 507 YDPFLNGPYRRTITKSVSPSIIK 529
>ref|YP_004564062.1| Ycf1 protein [Olea woodiana subsp. woodiana]
gi|334084717|emb|CBS29411.1| Ycf1 protein [Olea woodiana
subsp. woodiana]
Length = 1876
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESEH-YKNYEVPCVSIHVV-FLDILTQL 145
+K SIDNFIEK+ IN I GI+LPDTDY++ E ++ +S +V FL + +L
Sbjct: 531 KKTSIDNFIEKVGINRIHGIILPDTDYQKIEQKIDRFDKKPLSTEIVDFLTFINEL 586
Score = 38.5 bits (88), Expect(2) = 1e-08
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KS+SPSIIK
Sbjct: 507 YDPFLNGPYRRTITKSVSPSIIK 529
>ref|YP_004376479.1| Ycf1 protein [Olea europaea subsp. europaea]
gi|328795491|emb|CBR30373.1| Ycf1 protein [Olea europaea
subsp. europaea]
Length = 1876
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESEH-YKNYEVPCVSIHVV-FLDILTQL 145
+K SIDNFIEK+ IN I GI+LPDTDY++ E ++ +S +V FL + +L
Sbjct: 531 KKTSIDNFIEKVGINRIHGIILPDTDYQKIEQKIDRFDKKPLSTEIVDFLTFINEL 586
Score = 38.5 bits (88), Expect(2) = 1e-08
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KS+SPSIIK
Sbjct: 507 YDPFLNGPYRRTITKSVSPSIIK 529
>ref|YP_003359417.2| Ycf1 (chloroplast) [Olea europaea] gi|291059312|gb|ADD72148.1| YCF1
protein [Olea europaea] gi|334084545|emb|CBR24683.1|
Ycf1 protein [Olea europaea subsp. europaea]
gi|363413092|gb|ADA69984.2| Ycf1 (chloroplast) [Olea
europaea] gi|510934462|emb|CCQ09160.1| Ycf1 protein
(chloroplast) [Olea europaea subsp. europaea]
Length = 1876
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = -2
Query: 306 RKLSIDNFIEKIWINWIDGILLPDTDYEESEH-YKNYEVPCVSIHVV-FLDILTQL 145
+K SIDNFIEK+ IN I GI+LPDTDY++ E ++ +S +V FL + +L
Sbjct: 531 KKTSIDNFIEKVGINRIHGIILPDTDYQKIEQKIDRFDKKPLSTEIVDFLTFINEL 586
Score = 38.5 bits (88), Expect(2) = 1e-08
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1
Query: 373 YSPFLNGPS*RTIRKSLSPSIIK 305
Y PFLNGP RTI KS+SPSIIK
Sbjct: 507 YDPFLNGPYRRTITKSVSPSIIK 529