BLASTX nr result

ID: Forsythia23_contig00041298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00041298
         (304 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269865.1| PREDICTED: TATA box-binding protein-associat...    66   8e-09
emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]    66   8e-09
emb|CBI31957.3| unnamed protein product [Vitis vinifera]               64   5e-08
gb|KDO82922.1| hypothetical protein CISIN_1g004163mg [Citrus sin...    60   4e-07
gb|KDO82921.1| hypothetical protein CISIN_1g004163mg [Citrus sin...    60   4e-07
ref|XP_010086553.1| hypothetical protein L484_001445 [Morus nota...    60   7e-07
ref|XP_006483157.1| PREDICTED: TATA box-binding protein-associat...    59   2e-06
ref|XP_006483156.1| PREDICTED: TATA box-binding protein-associat...    59   2e-06
ref|XP_006438686.1| hypothetical protein CICLE_v10030768mg [Citr...    59   2e-06
ref|XP_006438685.1| hypothetical protein CICLE_v10030768mg [Citr...    59   2e-06
ref|XP_007131757.1| hypothetical protein PHAVU_011G039300g [Phas...    58   3e-06

>ref|XP_002269865.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B [Vitis vinifera]
          Length = 722

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
 Frame = -2

Query: 303 EYSRDLPTYLQYCKDVVFSGLQPXXXXXXXXXXXXXXXEFYQNSKDAGTSNSVKV---SG 133
           EYS+DLPTYLQYCKDVVF+GL+                EFYQN KD+  S  + V   S 
Sbjct: 479 EYSKDLPTYLQYCKDVVFAGLELPFEDHEEEKIIEQLWEFYQNQKDSEPSEDLGVECGSA 538

Query: 132 LPDKRSRNF--------NEIKRVQDDPILHEASQNCSTPHHQDNEQDSMD 7
           L +KRSRN          E K+++DD         CS P   D +  S++
Sbjct: 539 LNEKRSRNDEGCINSIPKEKKKIRDD---------CSVPLGLDGDDTSLN 579


>emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]
          Length = 722

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
 Frame = -2

Query: 303 EYSRDLPTYLQYCKDVVFSGLQPXXXXXXXXXXXXXXXEFYQNSKDAGTSNSVKV---SG 133
           EYS+DLPTYLQYCKDVVF+GL+                EFYQN KD+  S  + V   S 
Sbjct: 479 EYSKDLPTYLQYCKDVVFAGLELPFEDHEEEKIIEQLWEFYQNQKDSEPSEDLGVECGSA 538

Query: 132 LPDKRSRNF--------NEIKRVQDDPILHEASQNCSTPHHQDNEQDSMD 7
           L +KRSRN          E K+++DD         CS P   D +  S++
Sbjct: 539 LNEKRSRNDEGCINSIPKEKKKIRDD---------CSVPLGLDGDDTSLN 579


>emb|CBI31957.3| unnamed protein product [Vitis vinifera]
          Length = 713

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 11/86 (12%)
 Frame = -2

Query: 303 EYSRDLPTYLQYCKDVVFSGLQPXXXXXXXXXXXXXXXEFYQNSKDAGTSNSVKV---SG 133
           EYS+DLPTYLQYCKDVVF+GL+                EFYQN KD+  S  + V   S 
Sbjct: 405 EYSKDLPTYLQYCKDVVFAGLELPFEDHEEEKIIEQLWEFYQNQKDSEPSEDLGVECGSA 464

Query: 132 LPDKRSRNF--------NEIKRVQDD 79
           L +KRSRN          E K+++DD
Sbjct: 465 LNEKRSRNDEGCINSIPKEKKKIRDD 490


>gb|KDO82922.1| hypothetical protein CISIN_1g004163mg [Citrus sinensis]
          Length = 770

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -2

Query: 303 EYSRDLPTYLQYCKDVVFSGLQPXXXXXXXXXXXXXXXEFYQNSKDA-GTSNSVKVSGLP 127
           EYS+DLPTYL+YCKDVVF+GL+P               +FYQN K++    +S K  G+ 
Sbjct: 501 EYSKDLPTYLKYCKDVVFAGLEPPHDDPEEAIMIEKFWKFYQNEKESEAAEDSGKRCGIA 560

Query: 126 DKRSRNFNEI 97
            KR R+ +++
Sbjct: 561 SKRKRSRDDL 570


>gb|KDO82921.1| hypothetical protein CISIN_1g004163mg [Citrus sinensis]
          Length = 771

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -2

Query: 303 EYSRDLPTYLQYCKDVVFSGLQPXXXXXXXXXXXXXXXEFYQNSKDA-GTSNSVKVSGLP 127
           EYS+DLPTYL+YCKDVVF+GL+P               +FYQN K++    +S K  G+ 
Sbjct: 502 EYSKDLPTYLKYCKDVVFAGLEPPHDDPEEAIMIEKFWKFYQNEKESEAAEDSGKRCGIA 561

Query: 126 DKRSRNFNEI 97
            KR R+ +++
Sbjct: 562 SKRKRSRDDL 571


>ref|XP_010086553.1| hypothetical protein L484_001445 [Morus notabilis]
           gi|587829328|gb|EXB20252.1| hypothetical protein
           L484_001445 [Morus notabilis]
          Length = 761

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
 Frame = -2

Query: 303 EYSRDLPTYLQYCKDVVFSGLQPXXXXXXXXXXXXXXXEFYQNSKDAGTSNSVKVSG--- 133
           EYS+DLP+YLQ+CKDVVF+GL+P               +FY + +D+ T+   +  G   
Sbjct: 493 EYSKDLPSYLQFCKDVVFAGLEPSFEDYEEKRLIEELWDFYWSERDSKTAVQEEAHGSEA 552

Query: 132 LPDKRSR--------NFNEIKRVQD-----DPILHEASQNCSTPHHQDNEQDSMDRD 1
           +  KR+R         F E KR +D     DP  +  S++    H ++++Q    +D
Sbjct: 553 VTQKRARVDVECRSFPFKENKRFRDKGCVGDPSPYNGSRSAGDQHSENSDQFDSSQD 609


>ref|XP_006483157.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like isoform X2 [Citrus sinensis]
          Length = 771

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -2

Query: 303 EYSRDLPTYLQYCKDVVFSGLQPXXXXXXXXXXXXXXXEFYQNSKDA-GTSNSVKVSGLP 127
           E+S+DLPTYL+YCKDVVF+GL+P               +FYQN K++    +S K  G+ 
Sbjct: 502 EHSKDLPTYLKYCKDVVFAGLEPPHDDPEEAIMIEKFWKFYQNEKESEAAEDSGKRCGIA 561

Query: 126 DKRSRNFNEI 97
            KR R+ +++
Sbjct: 562 SKRKRSRDDL 571


>ref|XP_006483156.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like isoform X1 [Citrus sinensis]
          Length = 772

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -2

Query: 303 EYSRDLPTYLQYCKDVVFSGLQPXXXXXXXXXXXXXXXEFYQNSKDA-GTSNSVKVSGLP 127
           E+S+DLPTYL+YCKDVVF+GL+P               +FYQN K++    +S K  G+ 
Sbjct: 503 EHSKDLPTYLKYCKDVVFAGLEPPHDDPEEAIMIEKFWKFYQNEKESEAAEDSGKRCGIA 562

Query: 126 DKRSRNFNEI 97
            KR R+ +++
Sbjct: 563 SKRKRSRDDL 572


>ref|XP_006438686.1| hypothetical protein CICLE_v10030768mg [Citrus clementina]
           gi|557540882|gb|ESR51926.1| hypothetical protein
           CICLE_v10030768mg [Citrus clementina]
          Length = 769

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -2

Query: 303 EYSRDLPTYLQYCKDVVFSGLQPXXXXXXXXXXXXXXXEFYQNSKDA-GTSNSVKVSGLP 127
           E+S+DLPTYL+YCKDVVF+GL+P               +FYQN K++    +S K  G+ 
Sbjct: 500 EHSKDLPTYLKYCKDVVFAGLEPPHDDPEEAIMIEKFWKFYQNEKESEAAEDSGKRCGIA 559

Query: 126 DKRSRNFNEI 97
            KR R+ +++
Sbjct: 560 SKRKRSRDDL 569


>ref|XP_006438685.1| hypothetical protein CICLE_v10030768mg [Citrus clementina]
           gi|557540881|gb|ESR51925.1| hypothetical protein
           CICLE_v10030768mg [Citrus clementina]
          Length = 768

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -2

Query: 303 EYSRDLPTYLQYCKDVVFSGLQPXXXXXXXXXXXXXXXEFYQNSKDA-GTSNSVKVSGLP 127
           E+S+DLPTYL+YCKDVVF+GL+P               +FYQN K++    +S K  G+ 
Sbjct: 499 EHSKDLPTYLKYCKDVVFAGLEPPHDDPEEAIMIEKFWKFYQNEKESEAAEDSGKRCGIA 558

Query: 126 DKRSRNFNEI 97
            KR R+ +++
Sbjct: 559 SKRKRSRDDL 568


>ref|XP_007131757.1| hypothetical protein PHAVU_011G039300g [Phaseolus vulgaris]
           gi|561004757|gb|ESW03751.1| hypothetical protein
           PHAVU_011G039300g [Phaseolus vulgaris]
          Length = 721

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 39/124 (31%), Positives = 56/124 (45%), Gaps = 23/124 (18%)
 Frame = -2

Query: 303 EYSRDLPTYLQYCKDVVFSGLQPXXXXXXXXXXXXXXXEFYQNSKD------AGTSN-SV 145
           EY++DLPTYL+YC+DVVF+GL+P                FYQN +D       G SN S+
Sbjct: 475 EYTKDLPTYLKYCRDVVFAGLEPSYGNHEEENMIEYLWNFYQNEEDIKPLENVGQSNSSL 534

Query: 144 KVSGLPDK------------RSRNFNEI----KRVQDDPILHEASQNCSTPHHQDNEQDS 13
               L DK            R ++F+E+    +   +D +      N S     + E+DS
Sbjct: 535 NQKSLKDKECIDRTSKQEKIREKSFSELFPGDESCLEDDLSGSVDDNSSQESSSEGEEDS 594

Query: 12  MDRD 1
              D
Sbjct: 595 DSHD 598


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