BLASTX nr result

ID: Forsythia23_contig00041283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00041283
         (489 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS64991.1| Cleavage and polyadenylation specificity factor s...    72   1e-14
ref|XP_011048707.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD...    72   2e-14
ref|XP_011030098.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD...    72   2e-14
ref|XP_011030097.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD...    72   2e-14
ref|XP_002321911.1| hypothetical protein POPTR_0015s13200g [Popu...    72   2e-14
ref|XP_006367563.1| PREDICTED: cleavage and polyadenylation spec...    72   2e-14
ref|XP_004228445.1| PREDICTED: cleavage and polyadenylation spec...    72   2e-14
ref|NP_194285.2| cleavage/polyadenylation specificity factor [Ar...    73   3e-14
ref|XP_010433621.1| PREDICTED: cleavage and polyadenylation spec...    73   3e-14
emb|CDX92717.1| BnaC07g39750D [Brassica napus]                         73   3e-14
ref|XP_009137535.1| PREDICTED: cleavage and polyadenylation spec...    73   3e-14
ref|XP_009109202.1| PREDICTED: cleavage and polyadenylation spec...    73   3e-14
emb|CDX94441.1| BnaC01g17430D [Brassica napus]                         73   4e-14
ref|XP_009139321.1| PREDICTED: cleavage and polyadenylation spec...    73   4e-14
ref|XP_010671957.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD...    71   6e-14
ref|XP_004228446.1| PREDICTED: cleavage and polyadenylation spec...    71   6e-14
ref|XP_012090269.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD...    70   8e-14
ref|XP_006377071.1| hypothetical protein POPTR_0012s13280g [Popu...    68   5e-13
ref|XP_012858804.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD...    72   7e-13
gb|KJB37290.1| hypothetical protein B456_006G197700 [Gossypium r...    77   3e-12

>gb|EMS64991.1| Cleavage and polyadenylation specificity factor subunit 5 [Triticum
           urartu]
          Length = 321

 Score = 72.0 bits (175), Expect(2) = 1e-14
 Identities = 32/37 (86%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECKK+FIVHL+E+EYFAVP+NLKLLAVPLFEL+DNVQ
Sbjct: 177 ECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQ 213



 Score = 33.9 bits (76), Expect(2) = 1e-14
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPKVISLAN 275
           P   ++MY YCPP ITKPK +   N
Sbjct: 144 PNFETVMYPYCPPHITKPKDLGFRN 168


>ref|XP_011048707.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 2 [Populus
           euphratica]
          Length = 203

 Score = 72.4 bits (176), Expect(2) = 2e-14
 Identities = 32/37 (86%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECKK+++VHLSE+EYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 143 ECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 179



 Score = 32.7 bits (73), Expect(2) = 2e-14
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   +IMY YCPP ITKPK
Sbjct: 124 PNFETIMYPYCPPHITKPK 142


>ref|XP_011030098.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 2-like
           isoform X2 [Populus euphratica]
           gi|743857131|ref|XP_011030100.1| PREDICTED: pre-mRNA
           cleavage factor Im 25 kDa subunit 2-like isoform X3
           [Populus euphratica]
          Length = 203

 Score = 72.4 bits (176), Expect(2) = 2e-14
 Identities = 32/37 (86%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECKK+++VHLSE+EYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 143 ECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 179



 Score = 32.7 bits (73), Expect(2) = 2e-14
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   +IMY YCPP ITKPK
Sbjct: 124 PNFETIMYPYCPPHITKPK 142


>ref|XP_011030097.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 2-like
           isoform X1 [Populus euphratica]
          Length = 203

 Score = 72.4 bits (176), Expect(2) = 2e-14
 Identities = 32/37 (86%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECKK+++VHLSE+EYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 143 ECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 179



 Score = 32.7 bits (73), Expect(2) = 2e-14
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   +IMY YCPP ITKPK
Sbjct: 124 PNFETIMYPYCPPHITKPK 142


>ref|XP_002321911.1| hypothetical protein POPTR_0015s13200g [Populus trichocarpa]
           gi|118487488|gb|ABK95571.1| unknown [Populus
           trichocarpa] gi|222868907|gb|EEF06038.1| hypothetical
           protein POPTR_0015s13200g [Populus trichocarpa]
          Length = 202

 Score = 72.4 bits (176), Expect(2) = 2e-14
 Identities = 32/37 (86%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECKK+++VHLSE+EYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 143 ECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 179



 Score = 32.7 bits (73), Expect(2) = 2e-14
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   +IMY YCPP ITKPK
Sbjct: 124 PNFETIMYPYCPPHITKPK 142


>ref|XP_006367563.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Solanum tuberosum]
          Length = 200

 Score = 72.4 bits (176), Expect(2) = 2e-14
 Identities = 32/37 (86%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECKK+++VHLSE+EYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 141 ECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 177



 Score = 32.7 bits (73), Expect(2) = 2e-14
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   +IMY YCPP ITKPK
Sbjct: 122 PNFETIMYPYCPPHITKPK 140


>ref|XP_004228445.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Solanum lycopersicum]
          Length = 200

 Score = 72.4 bits (176), Expect(2) = 2e-14
 Identities = 32/37 (86%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECKK+++VHLSE+EYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 141 ECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 177



 Score = 32.7 bits (73), Expect(2) = 2e-14
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   +IMY YCPP ITKPK
Sbjct: 122 PNFETIMYPYCPPHITKPK 140


>ref|NP_194285.2| cleavage/polyadenylation specificity factor [Arabidopsis thaliana]
           gi|75151275|sp|Q8GXS3.1|CFIS2_ARATH RecName:
           Full=Pre-mRNA cleavage factor Im 25 kDa subunit 2
           gi|26451195|dbj|BAC42701.1| unknown protein [Arabidopsis
           thaliana] gi|28973229|gb|AAO63939.1| unknown protein
           [Arabidopsis thaliana] gi|110736890|dbj|BAF00402.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332659676|gb|AEE85076.1| cleavage/polyadenylation
           specificity factor [Arabidopsis thaliana]
          Length = 200

 Score = 73.2 bits (178), Expect(2) = 3e-14
 Identities = 33/37 (89%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECK+++IVHLSEKEYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 141 ECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQ 177



 Score = 31.6 bits (70), Expect(2) = 3e-14
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   ++MY YCPP ITKPK
Sbjct: 122 PNFETMMYPYCPPHITKPK 140


>ref|XP_010433621.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Camelina sativa]
           gi|727526864|ref|XP_010438868.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Camelina sativa] gi|727551828|ref|XP_010448413.1|
           PREDICTED: cleavage and polyadenylation specificity
           factor subunit 5-like [Camelina sativa]
          Length = 200

 Score = 73.2 bits (178), Expect(2) = 3e-14
 Identities = 33/37 (89%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECK+++IVHLSEKEYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 141 ECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQ 177



 Score = 31.6 bits (70), Expect(2) = 3e-14
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   ++MY YCPP ITKPK
Sbjct: 122 PNFETMMYPYCPPHITKPK 140


>emb|CDX92717.1| BnaC07g39750D [Brassica napus]
          Length = 200

 Score = 73.2 bits (178), Expect(2) = 3e-14
 Identities = 33/37 (89%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECK+++IVHLSEKEYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 141 ECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQ 177



 Score = 31.6 bits (70), Expect(2) = 3e-14
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   ++MY YCPP ITKPK
Sbjct: 122 PNFETMMYPYCPPHITKPK 140


>ref|XP_009137535.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Brassica rapa] gi|674882175|emb|CDY50198.1|
           BnaA03g47500D [Brassica napus]
          Length = 200

 Score = 73.2 bits (178), Expect(2) = 3e-14
 Identities = 33/37 (89%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECK+++IVHLSEKEYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 141 ECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQ 177



 Score = 31.6 bits (70), Expect(2) = 3e-14
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   ++MY YCPP ITKPK
Sbjct: 122 PNFETMMYPYCPPHITKPK 140


>ref|XP_009109202.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Brassica rapa] gi|674877894|emb|CDY54086.1|
           BnaC08g47260D [Brassica napus]
           gi|674879819|emb|CDY52363.1| BnaA08g30980D [Brassica
           napus]
          Length = 200

 Score = 73.2 bits (178), Expect(2) = 3e-14
 Identities = 33/37 (89%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECK+++IVHLSEKEYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 141 ECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQ 177



 Score = 31.6 bits (70), Expect(2) = 3e-14
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   ++MY YCPP ITKPK
Sbjct: 122 PNFETMMYPYCPPHITKPK 140


>emb|CDX94441.1| BnaC01g17430D [Brassica napus]
          Length = 236

 Score = 72.8 bits (177), Expect(2) = 4e-14
 Identities = 32/37 (86%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECK++++VHLSEKEYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 177 ECKRLYVVHLSEKEYFAVPKNLKLLAVPLFELYDNVQ 213



 Score = 31.6 bits (70), Expect(2) = 4e-14
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   ++MY YCPP ITKPK
Sbjct: 158 PNFETMMYPYCPPHITKPK 176


>ref|XP_009139321.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Brassica rapa] gi|674944228|emb|CDX89414.1|
           BnaA01g14790D [Brassica napus]
          Length = 200

 Score = 72.8 bits (177), Expect(2) = 4e-14
 Identities = 32/37 (86%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECK++++VHLSEKEYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 141 ECKRLYVVHLSEKEYFAVPKNLKLLAVPLFELYDNVQ 177



 Score = 31.6 bits (70), Expect(2) = 4e-14
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   ++MY YCPP ITKPK
Sbjct: 122 PNFETMMYPYCPPHITKPK 140


>ref|XP_010671957.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 2 [Beta
           vulgaris subsp. vulgaris] gi|870869869|gb|KMT20614.1|
           hypothetical protein BVRB_1g005930 [Beta vulgaris subsp.
           vulgaris]
          Length = 201

 Score = 71.2 bits (173), Expect(2) = 6e-14
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECKK+F+VHL E+EYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 142 ECKKLFMVHLPEREYFAVPKNLKLLAVPLFELYDNVQ 178



 Score = 32.3 bits (72), Expect(2) = 6e-14
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   ++MY YCPP ITKPK
Sbjct: 123 PNFETVMYPYCPPHITKPK 141


>ref|XP_004228446.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Solanum lycopersicum]
          Length = 200

 Score = 70.9 bits (172), Expect(2) = 6e-14
 Identities = 31/37 (83%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECKK+++VHLSE+E+FAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 141 ECKKLYLVHLSEREFFAVPKNLKLLAVPLFELYDNVQ 177



 Score = 32.7 bits (73), Expect(2) = 6e-14
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   +IMY YCPP ITKPK
Sbjct: 122 PNFETIMYPYCPPHITKPK 140


>ref|XP_012090269.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 2 [Jatropha
           curcas] gi|643706159|gb|KDP22291.1| hypothetical protein
           JCGZ_26122 [Jatropha curcas]
          Length = 200

 Score = 70.5 bits (171), Expect(2) = 8e-14
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECKK+F+V LSE+EYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 141 ECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQ 177



 Score = 32.7 bits (73), Expect(2) = 8e-14
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   +IMY YCPP ITKPK
Sbjct: 122 PNFETIMYPYCPPHITKPK 140


>ref|XP_006377071.1| hypothetical protein POPTR_0012s13280g [Populus trichocarpa]
           gi|550327038|gb|ERP54868.1| hypothetical protein
           POPTR_0012s13280g [Populus trichocarpa]
          Length = 217

 Score = 67.8 bits (164), Expect(2) = 5e-13
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECKK+F+ HLSE+EYFAV KNLKLLAVPLFEL+DNVQ
Sbjct: 157 ECKKLFLFHLSEREYFAVLKNLKLLAVPLFELYDNVQ 193



 Score = 32.7 bits (73), Expect(2) = 5e-13
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   +IMY YCPP ITKPK
Sbjct: 138 PNFETIMYPYCPPHITKPK 156


>ref|XP_012858804.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 2
           [Erythranthe guttatus] gi|604299698|gb|EYU19541.1|
           hypothetical protein MIMGU_mgv1a014127mg [Erythranthe
           guttata]
          Length = 200

 Score = 72.4 bits (176), Expect(2) = 7e-13
 Identities = 32/37 (86%), Positives = 37/37 (100%)
 Frame = +2

Query: 356 ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           ECKK+++VHLSE+EYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 141 ECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 177



 Score = 27.7 bits (60), Expect(2) = 7e-13
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 201 PILISIMYSYCPPQITKPK 257
           P   + MY YCPP ITK K
Sbjct: 122 PNFETTMYPYCPPHITKAK 140


>gb|KJB37290.1| hypothetical protein B456_006G197700 [Gossypium raimondii]
          Length = 171

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = +2

Query: 350 W*ECKKIFIVHLSEKEYFAVPKNLKLLAVPLFELHDNVQ 466
           W ECKK+F+VHLSEKEYFAVPKNLKLLAVPLFEL+DNVQ
Sbjct: 110 WQECKKLFLVHLSEKEYFAVPKNLKLLAVPLFELYDNVQ 148


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