BLASTX nr result

ID: Forsythia23_contig00041024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00041024
         (342 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011087879.1| PREDICTED: putative pumilio homolog 7, chlor...    99   1e-18
ref|XP_011092699.1| PREDICTED: putative pumilio homolog 8, chlor...    96   7e-18
ref|XP_010645385.1| PREDICTED: putative pumilio homolog 7, chlor...    62   1e-07
ref|XP_007042976.1| Pumilio 7 isoform 2 [Theobroma cacao] gi|508...    61   3e-07
ref|XP_007042975.1| Pumilio 7 isoform 1 [Theobroma cacao] gi|508...    61   3e-07

>ref|XP_011087879.1| PREDICTED: putative pumilio homolog 7, chloroplastic [Sesamum
           indicum]
          Length = 776

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 58/118 (49%), Positives = 74/118 (62%), Gaps = 8/118 (6%)
 Frame = -1

Query: 339 DTSIYASRNGMNLIDGRDAFSSANVLQSTNLMPRFSAQNLLHFQQPVPDGRSKVPACVRV 160
           D+  YASRNGMNLI+ RDA    NV+Q  +L+P ++ ++LLH++ P+ +GR+ +   VRV
Sbjct: 310 DSFFYASRNGMNLIEARDACYPPNVVQLAHLIPPYNEEDLLHYRPPLLNGRNNLH--VRV 367

Query: 159 PDGVFEGLTREDSSIDQGEDLNDAMKRRYGRSRGQNT-----RDFV---PQETRLQLD 10
           P G  E   REDS I QGE +N  M R   RSRGQNT      D V   PQE R QLD
Sbjct: 368 PQGSVEAFAREDSLIIQGEGINYGMNREQARSRGQNTTKGLHHDSVAGKPQEKRSQLD 425


>ref|XP_011092699.1| PREDICTED: putative pumilio homolog 8, chloroplastic [Sesamum
           indicum]
          Length = 737

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 55/114 (48%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
 Frame = -1

Query: 327 YASRNGMNLIDGRDAFSSANVLQSTNLMPRFSAQNLLHFQQPVPDGRSKVPACVRVPDGV 148
           + SRNGMNL +   A  S NV++   LMP ++ +NLLH+Q PVP+GR KVP C  VP   
Sbjct: 292 HPSRNGMNLTESEHAVYSPNVVRLAQLMPHYNEENLLHYQPPVPNGRDKVPLCAGVPQVS 351

Query: 147 FEGLTREDSSIDQGEDLNDAMKRRYGRSRGQNTRDF-------VPQETRLQLDG 7
            E  TREDS   QG+  N  M  R+ R RGQNTR F         QE   QLDG
Sbjct: 352 VEPFTREDSLFLQGKGFNYGM-TRHARPRGQNTRSFHHGSGSGKIQEKGSQLDG 404


>ref|XP_010645385.1| PREDICTED: putative pumilio homolog 7, chloroplastic [Vitis
           vinifera]
          Length = 785

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
 Frame = -1

Query: 339 DTSIYASRNGMNLIDGRDAFSSANVLQSTNLMPRFSAQNLLHFQQPVPDGRSKVPACVRV 160
           D   YA +  MNL + R   +  N  +  +  P  + +NLL +  P+  GR + P+ +++
Sbjct: 319 DALFYAQQKRMNLNEERGVLNLPNFPELNHPRPCLNMENLLQYSLPISSGRGRAPSNIKI 378

Query: 159 PDGVFEGLTREDSSIDQGEDLNDAMKRRYGRSRGQ------NTRDFVPQETRLQLDGR 4
             G  E  T EDS I QGE LN  + + +  S+G        T     +E   QLDGR
Sbjct: 379 SQGGLEDFTSEDSFIIQGEGLNYVINKGFDGSKGNFKGSSAETGVGKSEEKMTQLDGR 436


>ref|XP_007042976.1| Pumilio 7 isoform 2 [Theobroma cacao] gi|508706911|gb|EOX98807.1|
           Pumilio 7 isoform 2 [Theobroma cacao]
          Length = 761

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 33/96 (34%), Positives = 49/96 (51%)
 Frame = -1

Query: 339 DTSIYASRNGMNLIDGRDAFSSANVLQSTNLMPRFSAQNLLHFQQPVPDGRSKVPACVRV 160
           D  +Y  R+G++  D     +     +     P  S +NLLH   P+ +G ++  + +R+
Sbjct: 297 DALVYGQRHGLSWNDEIGELNFPGSPRLIQASPHASVENLLHHGLPLANGMARAHSNIRI 356

Query: 159 PDGVFEGLTREDSSIDQGEDLNDAMKRRYGRSRGQN 52
           P G  E  T EDS I QGE LN  + +   RSRGQN
Sbjct: 357 PHGGLEAFTSEDSFIIQGEGLNYVINKGLDRSRGQN 392


>ref|XP_007042975.1| Pumilio 7 isoform 1 [Theobroma cacao] gi|508706910|gb|EOX98806.1|
           Pumilio 7 isoform 1 [Theobroma cacao]
          Length = 762

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 33/96 (34%), Positives = 49/96 (51%)
 Frame = -1

Query: 339 DTSIYASRNGMNLIDGRDAFSSANVLQSTNLMPRFSAQNLLHFQQPVPDGRSKVPACVRV 160
           D  +Y  R+G++  D     +     +     P  S +NLLH   P+ +G ++  + +R+
Sbjct: 297 DALVYGQRHGLSWNDEIGELNFPGSPRLIQASPHASVENLLHHGLPLANGMARAHSNIRI 356

Query: 159 PDGVFEGLTREDSSIDQGEDLNDAMKRRYGRSRGQN 52
           P G  E  T EDS I QGE LN  + +   RSRGQN
Sbjct: 357 PHGGLEAFTSEDSFIIQGEGLNYVINKGLDRSRGQN 392


Top