BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00039932
         (699 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB73912.1| polyprotein [Citrus sinensis]                          382   e-103
gb|AFB73911.1| polyprotein [Citrus sinensis]                          373   e-101
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              365   1e-98
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              365   1e-98
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              363   4e-98
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              361   2e-97
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  358   2e-96
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             353   4e-95
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         265   2e-68
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           251   3e-64
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   251   3e-64
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]      250   6e-64
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   249   1e-63
emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera]   248   3e-63
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]            248   3e-63
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   247   4e-63
emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]   247   4e-63
emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]   244   3e-62
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     244   3e-62
emb|CAN77134.1| hypothetical protein VITISV_039954 [Vitis vinifera]   244   3e-62

>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  382 bits (981), Expect = e-103
 Identities = 187/225 (83%), Positives = 198/225 (88%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            ENLVCRLNKSLYGLKQAPRCWYKRFDSFI+SLGYNRLSSDHC YYKRF+ DND+      
Sbjct: 931  ENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCAYYKRFE-DNDFIILLLY 989

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                  A PN D++Q+LKAQLAREF+MKDLGPANKIL MQIHRDRNNRKIWLSQKNYLKK
Sbjct: 990  VDDMLVAGPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNRKIWLSQKNYLKK 1049

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            ILRRFNMQDCK ISTPLPVNFKLSS+MCPSNEAER EMSRVPYASAVGSLMFAMICTRPD
Sbjct: 1050 ILRRFNMQDCKSISTPLPVNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMICTRPD 1109

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYGAIRY 675
            IAQAVGAVSRYMANPG EHW  VKRILRYI+ TS+ ALCYG   +
Sbjct: 1110 IAQAVGAVSRYMANPGGEHWIAVKRILRYIRGTSNVALCYGGSEF 1154


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  373 bits (957), Expect = e-101
 Identities = 184/225 (81%), Positives = 194/225 (86%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            ENLVCRLNKSLYGLKQAPR WYKRFDSFI+SLGYNRLSSDHC YYKRF+ DND+      
Sbjct: 931  ENLVCRLNKSLYGLKQAPRYWYKRFDSFIMSLGYNRLSSDHCAYYKRFE-DNDFIILLLY 989

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                  A PN D++Q+LKAQLAREF+MKDLGPANKIL MQIHRDRNN KIWLSQKNYLKK
Sbjct: 990  VDDMLVAGPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNMKIWLSQKNYLKK 1049

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            ILRRFNMQDCK IST LPVNFKLSS+MCPSNEAER EMSRVPYASAVGSLMFAMICTRPD
Sbjct: 1050 ILRRFNMQDCKSISTSLPVNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMICTRPD 1109

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYGAIRY 675
            IAQAVG VSRYMANPG EHW  VKRILRYI+ TSD ALCYG   +
Sbjct: 1110 IAQAVGVVSRYMANPGGEHWIAVKRILRYIRGTSDVALCYGGSEF 1154


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  365 bits (938), Expect = 1e-98
 Identities = 178/221 (80%), Positives = 192/221 (86%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            ENLVCRL KSLYGLKQAPRCWYKRFDSFIISL YNRLSSDHC YYKRFDG ND+      
Sbjct: 927  ENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDG-NDFIILLLY 985

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                    PN D+VQ+LKAQLAREFDMKDLGPANKIL MQIHRDR +RKIWLSQKNYL+K
Sbjct: 986  VDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRK 1045

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +LRRFNMQDCK ISTPLPVNFKLSS M PSNEAERMEMSRVPYASAVGSLM+AMICTRPD
Sbjct: 1046 VLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPD 1105

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYG 663
            IAQAVG VSR+MA+PG+EHW+ VKRI+RYIK TS  A+C+G
Sbjct: 1106 IAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFG 1146


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  365 bits (938), Expect = 1e-98
 Identities = 178/221 (80%), Positives = 192/221 (86%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            ENLVCRL KSLYGLKQAPRCWYKRFDSFIISL YNRLSSDHC YYKRFDG ND+      
Sbjct: 927  ENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDG-NDFIILLLY 985

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                    PN D+VQ+LKAQLAREFDMKDLGPANKIL MQIHRDR +RKIWLSQKNYL+K
Sbjct: 986  VDDILVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRK 1045

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +LRRFNMQDCK ISTPLPVNFKLSS M PSNEAERMEMSRVPYASAVGSLM+AMICTRPD
Sbjct: 1046 VLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPD 1105

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYG 663
            IAQAVG VSR+MA+PG+EHW+ VKRI+RYIK TS  A+C+G
Sbjct: 1106 IAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFG 1146


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  363 bits (933), Expect = 4e-98
 Identities = 177/221 (80%), Positives = 192/221 (86%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            ENLVCRL KSLYGLKQAPRCWYKRFDSFIISL Y+RLSSDHC YYKRFDG ND+      
Sbjct: 927  ENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDG-NDFIILLLY 985

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                    PN D+VQ+LKAQLAREFDMKDLGPANKIL MQIHRDR +RKIWLSQKNYL+K
Sbjct: 986  VDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRK 1045

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +LRRFNMQDCK ISTPLPVNFKLSS M PSNEAERMEMSRVPYASAVGSLM+AMICTRPD
Sbjct: 1046 VLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPD 1105

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYG 663
            IAQAVG VSR+MA+PG+EHW+ VKRI+RYIK TS  A+C+G
Sbjct: 1106 IAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFG 1146


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  361 bits (927), Expect = 2e-97
 Identities = 176/221 (79%), Positives = 191/221 (86%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            ENLVCRL KSLYGLKQAPRCWYKRFDSFIISL Y+RLSSDHC YYKRFDG ND+      
Sbjct: 927  ENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDG-NDFIILLLY 985

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                    PN D+VQ+LKAQLAREFDMKDLGPANKIL MQIHRDR + KIWLSQKNYL+K
Sbjct: 986  VDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDMKIWLSQKNYLRK 1045

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +LRRFNMQDCK ISTPLPVNFKLSS M PSNEAERMEMSRVPYASAVGSLM+AMICTRPD
Sbjct: 1046 VLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPD 1105

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYG 663
            IAQAVG VSR+MA+PG+EHW+ VKRI+RYIK TS  A+C+G
Sbjct: 1106 IAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFG 1146


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  358 bits (919), Expect = 2e-96
 Identities = 175/225 (77%), Positives = 193/225 (85%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            ENLVCRL KSLYGLKQAPRCWYKRFDSFI+SLGYNRLSSDHC YYKRFD D D+      
Sbjct: 927  ENLVCRLTKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCTYYKRFD-DGDFIILLLY 985

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                    PN D+VQ+LKAQLAREFDMKDLGPANKIL MQIHRDR +RKIWLSQKNYL+K
Sbjct: 986  VDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQK 1045

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +LRRFNMQD   ISTPLPVN+KLSS+M PS+EAERMEMSRVPYASAVGSLM+AMICTRPD
Sbjct: 1046 VLRRFNMQDYNPISTPLPVNYKLSSSMIPSSEAERMEMSRVPYASAVGSLMYAMICTRPD 1105

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYGAIRY 675
            IAQAVG VSR+MA+PG+EHW+ VKRILRYI+ TS AALC+G   +
Sbjct: 1106 IAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAALCFGGSEF 1150


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  353 bits (907), Expect = 4e-95
 Identities = 173/221 (78%), Positives = 187/221 (84%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            +NLVCRLNKSLYGLKQAPRCWYKRFDSFI+ LGYNRL++D C Y+KRF  DN +      
Sbjct: 920  QNLVCRLNKSLYGLKQAPRCWYKRFDSFIMCLGYNRLNADPCAYFKRFGKDN-FVILLLY 978

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                  A PN D + +LKAQLAREF+MKDLGPANKIL MQIHRDR NRKIWLSQKNYLKK
Sbjct: 979  VDDMLVAGPNKDHIDELKAQLAREFEMKDLGPANKILGMQIHRDRGNRKIWLSQKNYLKK 1038

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            IL RF+MQDCK ISTPLP+N K+SS+M PSNE  RMEMSRVPYASAVGSLMFAMICTRPD
Sbjct: 1039 ILSRFSMQDCKSISTPLPINLKVSSSMSPSNEEGRMEMSRVPYASAVGSLMFAMICTRPD 1098

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYG 663
            IAQAVG VSRYMANPGREHW+ VKRILRYIK TSD ALCYG
Sbjct: 1099 IAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVALCYG 1139


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  265 bits (676), Expect = 2e-68
 Identities = 123/221 (55%), Positives = 163/221 (73%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            E+ VCRL KSLYGLKQAPR WYK+F S +   GY + SSDHCV+  R+  D+D+      
Sbjct: 948  EDYVCRLKKSLYGLKQAPRQWYKKFTSVMSKHGYKKTSSDHCVFVNRYS-DDDFVILLLY 1006

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                     N  ++Q+LK +L++ F MKD+GPA +IL M+I RDR N+K+WLSQ+ Y++K
Sbjct: 1007 VDDMLIVGRNASRIQELKQELSKSFSMKDMGPAKQILGMKIIRDRQNKKLWLSQEKYIEK 1066

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +L RF+M + K +STPL ++FKL    CPS+E E+ EM RVPY+SAVGSLM+AM+CTRPD
Sbjct: 1067 VLERFHMNEAKPVSTPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVGSLMYAMVCTRPD 1126

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYG 663
            IA AVG VSR+++NPGREHWD VK ILRY++ TS  +LC+G
Sbjct: 1127 IAHAVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLSLCFG 1167


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  251 bits (641), Expect = 3e-64
 Identities = 119/221 (53%), Positives = 160/221 (72%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            E+ VCRL KSLYGLKQAPR WYK+F+S +   GY + +SDHCV+ ++F  D+D+      
Sbjct: 951  EDYVCRLRKSLYGLKQAPRQWYKKFESVMGQHGYKKTTSDHCVFAQKFS-DDDFIILLLY 1009

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                     N  ++  LK QL++ F MKDLGPA +IL M+I RDR  +K+WLSQ+ Y++K
Sbjct: 1010 VDDMLIVGRNVSRINSLKEQLSKFFAMKDLGPAKQILGMRIMRDREAKKLWLSQEKYIEK 1069

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +L+RFNM+  K +S PL  +F+LS+   PS + ER +M R+PYASAVGSLM+AM+CTRPD
Sbjct: 1070 VLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVCTRPD 1129

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYG 663
            IA AVG VSR+++NPG+EHWD VK ILRY++ TS   LC+G
Sbjct: 1130 IAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFG 1170


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  251 bits (641), Expect = 3e-64
 Identities = 124/224 (55%), Positives = 163/224 (72%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            ENLVCRL KSLYGLKQ+PR WYKRFDSF++S  + R + D CVY K  DG   Y      
Sbjct: 1163 ENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVD 1222

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                  A+ +  ++ KLKAQL+ EF+MKDLG A KIL M+I R R++ K++LSQK Y++K
Sbjct: 1223 DMLI--AAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEK 1280

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +LRRFNM D K +STPL  +F+LSS++CP ++ +   MSRVPY+SAVGSLM+AM+C+RPD
Sbjct: 1281 VLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAVGSLMYAMVCSRPD 1340

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYGAIR 672
            ++ A+  VSRYMANPG+EHW  V+ I RY++ TS A L +G  R
Sbjct: 1341 LSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSR 1384


>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score =  250 bits (638), Expect = 6e-64
 Identities = 117/221 (52%), Positives = 159/221 (71%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            E+ VCRL KSLYGLKQAPR WYK+F+S +   GY + +SDHCV+ K+F  D D+      
Sbjct: 894  EDHVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVKKFAND-DFIILLLY 952

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                     +   + +LK QL+  F MKD+G A +IL ++I RDR  +K+WLSQ+NY+K+
Sbjct: 953  VDDILIVGKDISMINRLKKQLSESFAMKDMGAAKQILGIRIMRDRQEKKLWLSQENYVKR 1012

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +L+RF M++ K++STPL  +FKLS+   PS E E+ +M R+PYASAVGSLM+AM+CTRPD
Sbjct: 1013 VLQRFQMENAKVVSTPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAMVCTRPD 1072

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYG 663
            IA  VG VSR+M+NPGREHW+ VK ILRY++ T+   LC+G
Sbjct: 1073 IAHVVGTVSRFMSNPGREHWNAVKWILRYLRGTTCLRLCFG 1113


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease [Nicotiana tabacum]
            gi|20045|emb|CAA32025.1| unnamed protein product
            [Nicotiana tabacum]
          Length = 1328

 Score =  249 bits (636), Expect = 1e-63
 Identities = 117/221 (52%), Positives = 161/221 (72%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            +++VC+LNKSLYGLKQAPR WY +FDSF+ S  Y +  SD CVY+KRF  +N++      
Sbjct: 950  KHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFS-ENNFIILLLY 1008

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                     +   + KLK  L++ FDMKDLGPA +IL M+I R+R +RK+WLSQ+ Y+++
Sbjct: 1009 VDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIER 1068

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +L RFNM++ K +STPL  + KLS  MCP+   E+  M++VPY+SAVGSLM+AM+CTRPD
Sbjct: 1069 VLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPD 1128

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYG 663
            IA AVG VSR++ NPG+EHW+ VK ILRY++ T+   LC+G
Sbjct: 1129 IAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFG 1169


>emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera]
          Length = 1186

 Score =  248 bits (632), Expect = 3e-63
 Identities = 119/220 (54%), Positives = 155/220 (70%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            ENLVC+L KSLYGLKQAPR WYK+FD+F+  +G+ R  +DHC Y+K FD  N Y      
Sbjct: 602  ENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFD--NSYIILLLY 659

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                  A  + +++  LK QL+++F MKDLG A +IL M+I RD+ N  + LSQ  Y+KK
Sbjct: 660  VDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANSTLKLSQSEYVKK 719

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +L RFNM + K +STPL  +FKLS    P  E ER  MS+VPYASA+GSLM+AM+CTRPD
Sbjct: 720  VLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPD 779

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCY 660
            IA AVG VSR+M+ PG++HW+ VK ILRY+K + D  LC+
Sbjct: 780  IAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCF 819


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  248 bits (632), Expect = 3e-63
 Identities = 115/221 (52%), Positives = 158/221 (71%)
 Frame = +1

Query: 1   ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
           EN VC+L KSLYGLKQAPR WY +FDSF+ +  Y R ++D CVY+++F   N +      
Sbjct: 310 ENFVCKLKKSLYGLKQAPRQWYHKFDSFMSNNEYKRTTADPCVYFRKFSEGN-FIILCLY 368

Query: 181 XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                    + + + +LK  L++ FDMKDLGPA +IL M+I RDR   K+WLSQ+NY+++
Sbjct: 369 VDDMLIVGQDVEMICRLKEDLSKSFDMKDLGPAKQILGMEIARDRKAGKLWLSQENYIER 428

Query: 361 ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
           +L RFNM++ K ++TPL  +FKLS   CP+ E E+  MS +PY+S VGSLM+AM+CTRPD
Sbjct: 429 VLERFNMKNAKPVNTPLAAHFKLSKRCCPTTEKEKESMSHIPYSSVVGSLMYAMVCTRPD 488

Query: 541 IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYG 663
           IA AVG VSRY+ANP + HW+ VK ILRY++ TS+ +LC+G
Sbjct: 489 IAHAVGLVSRYLANPSKVHWEAVKWILRYLRGTSNLSLCFG 529


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  247 bits (631), Expect = 4e-63
 Identities = 122/221 (55%), Positives = 152/221 (68%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            EN VC+L KSLYGLKQ+PR WYKRFDS+++ LGY R S D CVYY R + D+ +      
Sbjct: 931  ENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLN-DDSFIYLVLY 989

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                  A+     +QKLK  L+ EF+MKDLG A KIL M+I RDR  RK++LSQ++Y++K
Sbjct: 990  VDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQK 1049

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +L RF M   K I TP   N  L++   P +E E+  MSRVPYASAVGSLM+AM+CTRPD
Sbjct: 1050 VLARFGMSSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPD 1109

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCYG 663
            +A AV  VSR+M  PGREHW  VKRI RY++ TSD  L YG
Sbjct: 1110 LAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYG 1150


>emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]
          Length = 1286

 Score =  247 bits (631), Expect = 4e-63
 Identities = 118/220 (53%), Positives = 156/220 (70%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            ENLVC+L KSLYGLKQAPR WYK+FD+F+  +G+ R  +DHC Y+K FD  N Y      
Sbjct: 910  ENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFD--NSYIILLLY 967

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                  A  + +++  LK QL+++F MKDLG A +IL M+I RD+ N  + LSQ  Y+KK
Sbjct: 968  VDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKK 1027

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +L RFNM + K +STPL  +FKLS    P  E +R  MS+VPYASA+GSLM+AM+CTRPD
Sbjct: 1028 VLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEKRDHMSKVPYASAIGSLMYAMVCTRPD 1087

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCY 660
            IA AVG VSR+M+ PG++HW++VK ILRY+K + D  LC+
Sbjct: 1088 IAHAVGVVSRFMSRPGKQHWEVVKWILRYLKGSLDTCLCF 1127


>emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]
          Length = 1211

 Score =  244 bits (624), Expect = 3e-62
 Identities = 118/220 (53%), Positives = 154/220 (70%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            ENLVC+L KSLYGLKQAPR WYK+FD+F+  +G+ R  +DHC Y+K FD  N Y      
Sbjct: 835  ENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFD--NSYIILLLY 892

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                     + +++  LK QL+++F MKDLG A +IL M+I RD+ N  + LSQ  Y+KK
Sbjct: 893  VDDMLITGFDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKK 952

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +L RFNM + K +STPL  +FKLS    P  E ER  MS+VPYASA+GSLM+AM+CTRPD
Sbjct: 953  VLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPD 1012

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCY 660
            IA AVG VSR+M+ PG++HW+ VK ILRY+K + D  LC+
Sbjct: 1013 IAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCF 1052


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  244 bits (624), Expect = 3e-62
 Identities = 120/218 (55%), Positives = 160/218 (73%)
 Frame = +1

Query: 1    ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
            ENLVCRL KSLYGLKQ+PR WYKRFDSF++S  +   + D CVY K  DG   Y      
Sbjct: 928  ENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYLKVVDGSVIYLLLYVD 987

Query: 181  XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                  A+ +  +++KLKAQL+ EF+MKDLG A KIL M+I R+R++ K++LSQK Y++K
Sbjct: 988  DMLI--AAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEK 1045

Query: 361  ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
            +LRRFNM D K +STPL  +F+LSS++CP ++ +   MSRVPY+SAVGSLM+AM+C RPD
Sbjct: 1046 VLRRFNMHDAKPVSTPLAAHFRLSSDLCPLSDYDIEYMSRVPYSSAVGSLMYAMVCCRPD 1105

Query: 541  IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAAL 654
            ++ A+  V+RYMANPG+EHW  V+ I RY++ TS A L
Sbjct: 1106 LSHALSVVNRYMANPGKEHWKAVQWIFRYLRGTSSACL 1143


>emb|CAN77134.1| hypothetical protein VITISV_039954 [Vitis vinifera]
          Length = 632

 Score =  244 bits (623), Expect = 3e-62
 Identities = 116/220 (52%), Positives = 156/220 (70%)
 Frame = +1

Query: 1   ENLVCRLNKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCVYYKRFDGDNDYXXXXXX 180
           ENLVC+L KSLYGLKQAPR WYK+FD+F+  +G+ R  ++HC Y+K FD  N Y      
Sbjct: 336 ENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEANHCCYFKSFD--NSYIILLLY 393

Query: 181 XXXXXXASPNNDQVQKLKAQLAREFDMKDLGPANKILRMQIHRDRNNRKIWLSQKNYLKK 360
                 A  + +++  LK QL+++F MKDLG A +IL M+I RD+ N  + LSQ  Y+KK
Sbjct: 394 VDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKK 453

Query: 361 ILRRFNMQDCKLISTPLPVNFKLSSNMCPSNEAERMEMSRVPYASAVGSLMFAMICTRPD 540
           +L RFNM + K +STPL  +FKLS    P  E E+  MS+VPYASA+GSLM+AM+CTRP+
Sbjct: 454 VLSRFNMNEAKPVSTPLDSHFKLSKEQSPKTEEEKDHMSKVPYASAIGSLMYAMVCTRPN 513

Query: 541 IAQAVGAVSRYMANPGREHWDIVKRILRYIKETSDAALCY 660
           IA AVG VSR+M+ PG++HW++VK ILRY+K + D  LC+
Sbjct: 514 IAHAVGVVSRFMSRPGKQHWEVVKWILRYLKGSLDTCLCF 553