BLASTX nr result

ID: Forsythia23_contig00039864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00039864
         (368 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011092644.1| PREDICTED: pentatricopeptide repeat-containi...    99   1e-18
ref|XP_012837392.1| PREDICTED: pentatricopeptide repeat-containi...    80   4e-13
ref|XP_010325622.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
emb|CDP07175.1| unnamed protein product [Coffea canephora]             64   5e-08
ref|XP_007015351.1| Pentatricopeptide repeat-containing protein,...    63   7e-08
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06

>ref|XP_011092644.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31790
           [Sesamum indicum]
          Length = 398

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = -3

Query: 261 KNYILHKNITLIKHQS-TPKHPIQIQLPLHRPKSVPIQPVDVKPQPRKSNPTPRTTTSDI 85
           K  +LH +++  K+ + T  HPIQIQLPLHRP +    P+ +KP P+K NP P  TTSDI
Sbjct: 11  KTALLHIDVSSTKNNNFTSDHPIQIQLPLHRPPT----PMRIKPPPKKPNPKPVATTSDI 66

Query: 84  LYLMDSLNLTIPLDIYISLVKECTKIGD 1
           L LMDSL L IPLDIY SL+KECTK+ D
Sbjct: 67  LRLMDSLKLPIPLDIYTSLIKECTKLRD 94


>ref|XP_012837392.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31790
           [Erythranthe guttatus]
          Length = 413

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 48/90 (53%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
 Frame = -3

Query: 264 HKNYILHKNITLIKHQSTPKHPIQIQLPLHR-PKSVPI-QPVDVKPQPRKSNPTPRTTTS 91
           H    L  NI+  K   TP   IQIQLP+HR P+  P+ +P  +KP P+     P TTTS
Sbjct: 9   HAKAALLFNISSAKQSRTP---IQIQLPIHRRPEYKPVPKPARIKPVPK-----PVTTTS 60

Query: 90  DILYLMDSLNLTIPLDIYISLVKECTKIGD 1
           DIL+LMDSL L IP DIY SL+KECT++GD
Sbjct: 61  DILHLMDSLKLPIPPDIYTSLIKECTELGD 90


>ref|XP_010325622.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31790
           [Solanum lycopersicum]
          Length = 417

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 45/109 (41%), Positives = 61/109 (55%)
 Frame = -3

Query: 327 MEITAFHLKAPPYHVYTFSEKHKNYILHKNITLIKHQSTPKHPIQIQLPLHRPKSVPIQP 148
           M IT+ + K P  H    S+  K +I       I   S    P+Q QLPLH+P     QP
Sbjct: 1   MAITSSYPKPPLLHTKITSKNSKKWIP------ITTHSISNTPLQFQLPLHKPHYKIHQP 54

Query: 147 VDVKPQPRKSNPTPRTTTSDILYLMDSLNLTIPLDIYISLVKECTKIGD 1
           +  KP+ +K+   P  T SD+L LMDSL   IP+D+Y+SL+KECT+  D
Sbjct: 55  I--KPEIKKTTD-PSCTISDVLRLMDSLGFNIPVDVYVSLIKECTESRD 100


>emb|CDP07175.1| unnamed protein product [Coffea canephora]
          Length = 430

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 41/113 (36%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
 Frame = -3

Query: 327 MEITAFHLKAPPYHVYTFSEKH----KNYILHKNITLIKHQSTPKHPIQIQLPLHRPKSV 160
           ME+   HL   P        K      N    K I  +   S     IQI LPL RP+  
Sbjct: 1   MEVKIPHLTPTPQQRILTPPKRIRFPPNKPTFKKIVTVPTSSPSNSSIQIHLPLRRPQHK 60

Query: 159 PIQPVDVKPQPRKSNPTPRTTTSDILYLMDSLNLTIPLDIYISLVKECTKIGD 1
           PIQ         K  P+ R+T SD+L L+D L + + LD+Y S + ECTK GD
Sbjct: 61  PIQKTHKNSNDCK--PSNRSTVSDVLGLLDCLKIPVSLDLYTSFIDECTKSGD 111


>ref|XP_007015351.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508785714|gb|EOY32970.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 413

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 42/87 (48%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
 Frame = -3

Query: 252 ILHKNITLIKHQSTPKHPIQ---IQLPLHRPKSVPIQPVDVKP----QPRKSNPTPRTTT 94
           +L  N    + Q+TP  PI     QLPL   K     P    P    +P  SNP    TT
Sbjct: 18  MLPSNKLTFRSQATPAPPISQLHSQLPLRITKQSSKTPPPPTPISTSKPISSNPCSSHTT 77

Query: 93  SDILYLMDSLNLTIPLDIYISLVKECT 13
           SDIL LMDSL+L IP DIY SLVKECT
Sbjct: 78  SDILRLMDSLSLPIPPDIYASLVKECT 104


>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max] gi|734393681|gb|KHN28310.1|
           Pentatricopeptide repeat-containing protein [Glycine
           soja]
          Length = 423

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
 Frame = -3

Query: 321 ITAFHLKAPPYHVYTFSEKHKNYILHKNITLIKHQSTPKHPIQIQLPLHRPKSVPIQPVD 142
           ITA     P +H++ F E     +  KN  L +   +P H ++ +LPL  P  +   P  
Sbjct: 4   ITAPVTTVPTHHLF-FDEN----VDLKNSKL-RTLPSPNHQLEFRLPLRHP--IHNFPNH 55

Query: 141 VKPQP----------RKSNPTPRTTTSDILYLMDSLNLTIPLDIYISLVKECTKIGD 1
             PQP          +K       TTSDIL+LM++L   +P+DIY SL+KECT  GD
Sbjct: 56  TSPQPLTQTTTFTKKKKKKKRKGATTSDILHLMEALPFPVPIDIYTSLIKECTVSGD 112


>ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31790
           [Cicer arietinum]
          Length = 418

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
 Frame = -3

Query: 252 ILHKNITLIKHQSTPKHPIQIQLPLHRPKSVPI------QPVDVKPQPRKSNPTPRT--- 100
           I + NIT      +  H + ++LP   PK +        QP+ V P   K+N   +    
Sbjct: 13  IRNTNIT----SPSSNHQLHLRLPFRNPKLINFPHHPSSQPLTVTPPRNKNNTKNKNNNK 68

Query: 99  ----TTSDILYLMDSLNLTIPLDIYISLVKECTKIGD 1
               TTS IL LMD+L+  IP+DIY SLVKECT  GD
Sbjct: 69  RKSATTSHILPLMDALHFPIPIDIYTSLVKECTLSGD 105


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