BLASTX nr result
ID: Forsythia23_contig00039809
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00039809
(521 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009782960.1| PREDICTED: probable E3 ubiquitin-protein lig... 89 9e-16
ref|XP_009601059.1| PREDICTED: probable E3 ubiquitin-protein lig... 89 9e-16
ref|XP_010313683.1| PREDICTED: probable E3 ubiquitin-protein lig... 88 2e-15
ref|XP_006357677.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 86 9e-15
ref|XP_004243594.1| PREDICTED: probable E3 ubiquitin-protein lig... 86 9e-15
ref|XP_004243593.1| PREDICTED: probable E3 ubiquitin-protein lig... 86 9e-15
ref|XP_009777796.1| PREDICTED: probable E3 ubiquitin-protein lig... 83 6e-14
ref|XP_006352006.1| PREDICTED: RING-H2 finger protein ATL11-like... 83 6e-14
emb|CDP14415.1| unnamed protein product [Coffea canephora] 82 1e-13
ref|XP_009605085.1| PREDICTED: probable E3 ubiquitin-protein lig... 82 1e-13
ref|XP_012830865.1| PREDICTED: probable E3 ubiquitin-protein lig... 80 7e-13
gb|AGQ44778.1| RING-H2 zinc finger protein [Camellia sinensis] 74 4e-11
ref|XP_010321079.1| PREDICTED: probable E3 ubiquitin-protein lig... 73 8e-11
ref|XP_004239288.2| PREDICTED: probable E3 ubiquitin-protein lig... 73 8e-11
ref|XP_012485640.1| PREDICTED: probable E3 ubiquitin-protein lig... 72 1e-10
gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum] 72 1e-10
ref|XP_003601512.1| RING-H2 finger protein ATL4K [Medicago trunc... 71 2e-10
ref|XP_011009089.1| PREDICTED: probable E3 ubiquitin-protein lig... 70 5e-10
ref|XP_002321207.1| hypothetical protein POPTR_0014s16830g [Popu... 70 5e-10
gb|ABK93992.1| unknown [Populus trichocarpa] 70 5e-10
>ref|XP_009782960.1| PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Nicotiana
sylvestris] gi|698466648|ref|XP_009782961.1| PREDICTED:
probable E3 ubiquitin-protein ligase XERICO [Nicotiana
sylvestris] gi|698466650|ref|XP_009782962.1| PREDICTED:
probable E3 ubiquitin-protein ligase XERICO [Nicotiana
sylvestris]
Length = 153
Score = 89.4 bits (220), Expect = 9e-16
Identities = 36/41 (87%), Positives = 36/41 (87%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDACPM 125
SCGHVFHK CLEKWL YWNVTCPLCRNYMMPQ EED CPM
Sbjct: 113 SCGHVFHKQCLEKWLKYWNVTCPLCRNYMMPQEGEEDTCPM 153
>ref|XP_009601059.1| PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Nicotiana
tomentosiformis] gi|697184069|ref|XP_009601060.1|
PREDICTED: probable E3 ubiquitin-protein ligase XERICO
[Nicotiana tomentosiformis]
Length = 153
Score = 89.4 bits (220), Expect = 9e-16
Identities = 36/41 (87%), Positives = 36/41 (87%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDACPM 125
SCGHVFHK CLEKWL YWNVTCPLCRNYMMPQ EED CPM
Sbjct: 113 SCGHVFHKQCLEKWLKYWNVTCPLCRNYMMPQEGEEDTCPM 153
>ref|XP_010313683.1| PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Solanum
lycopersicum]
Length = 152
Score = 87.8 bits (216), Expect = 2e-15
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDACPM 125
SCGHVFHKLCLEKWL YW+VTCPLCRNY+MPQ E+D CPM
Sbjct: 112 SCGHVFHKLCLEKWLRYWHVTCPLCRNYLMPQQEEDDTCPM 152
>ref|XP_006357677.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like isoform X1
[Solanum tuberosum] gi|565382716|ref|XP_006357678.1|
PREDICTED: E3 ubiquitin-protein ligase RHA1B-like
isoform X2 [Solanum tuberosum]
Length = 152
Score = 85.9 bits (211), Expect = 9e-15
Identities = 35/41 (85%), Positives = 35/41 (85%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDACPM 125
SCGHVFHK CLEKWL YWNVTCPLCRNYMM Q EED CPM
Sbjct: 112 SCGHVFHKHCLEKWLKYWNVTCPLCRNYMMSQEGEEDTCPM 152
>ref|XP_004243594.1| PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X2
[Solanum lycopersicum] gi|723716295|ref|XP_010323922.1|
PREDICTED: probable E3 ubiquitin-protein ligase XERICO
isoform X2 [Solanum lycopersicum]
Length = 152
Score = 85.9 bits (211), Expect = 9e-15
Identities = 35/41 (85%), Positives = 35/41 (85%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDACPM 125
SCGHVFHK CLEKWL YWNVTCPLCRNYMM Q EED CPM
Sbjct: 112 SCGHVFHKHCLEKWLKYWNVTCPLCRNYMMSQEGEEDTCPM 152
>ref|XP_004243593.1| PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X1
[Solanum lycopersicum]
Length = 182
Score = 85.9 bits (211), Expect = 9e-15
Identities = 35/41 (85%), Positives = 35/41 (85%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDACPM 125
SCGHVFHK CLEKWL YWNVTCPLCRNYMM Q EED CPM
Sbjct: 142 SCGHVFHKHCLEKWLKYWNVTCPLCRNYMMSQEGEEDTCPM 182
>ref|XP_009777796.1| PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Nicotiana
sylvestris] gi|698582342|ref|XP_009777797.1| PREDICTED:
probable E3 ubiquitin-protein ligase XERICO [Nicotiana
sylvestris]
Length = 149
Score = 83.2 bits (204), Expect = 6e-14
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDACPM 125
SCGHVFHKLCLEKWL YW+VTCPLCR +MMP E+D CPM
Sbjct: 109 SCGHVFHKLCLEKWLKYWHVTCPLCRKHMMPHEQEDDTCPM 149
>ref|XP_006352006.1| PREDICTED: RING-H2 finger protein ATL11-like [Solanum tuberosum]
Length = 152
Score = 83.2 bits (204), Expect = 6e-14
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDACPM 125
SCGHVFHKLCLEKWL YW+VTCPLCRNY+M Q E++ CPM
Sbjct: 112 SCGHVFHKLCLEKWLRYWHVTCPLCRNYLMSQQEEDETCPM 152
>emb|CDP14415.1| unnamed protein product [Coffea canephora]
Length = 152
Score = 82.4 bits (202), Expect = 1e-13
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDACPM 125
SCGHVFH+LCLEKWL YW+VTCPLCRNYM+PQ E+ CPM
Sbjct: 112 SCGHVFHRLCLEKWLKYWHVTCPLCRNYMLPQEGLENTCPM 152
>ref|XP_009605085.1| PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Nicotiana
tomentosiformis] gi|697192023|ref|XP_009605086.1|
PREDICTED: probable E3 ubiquitin-protein ligase XERICO
[Nicotiana tomentosiformis]
Length = 149
Score = 82.0 bits (201), Expect = 1e-13
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDACPM 125
SCGHVFHKLCLEKWL YW+VTCPLCR YMM E+D CPM
Sbjct: 109 SCGHVFHKLCLEKWLKYWHVTCPLCRKYMMSHEQEDDTCPM 149
>ref|XP_012830865.1| PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Erythranthe
guttatus] gi|848860011|ref|XP_012830866.1| PREDICTED:
probable E3 ubiquitin-protein ligase XERICO [Erythranthe
guttatus] gi|604343980|gb|EYU42797.1| hypothetical
protein MIMGU_mgv1a015516mg [Erythranthe guttata]
Length = 155
Score = 79.7 bits (195), Expect = 7e-13
Identities = 35/44 (79%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMM-PQAL--EEDACPM 125
SCGHVFHK CLEKWLNYWN TCPLCRN MM PQ + EED+CPM
Sbjct: 112 SCGHVFHKSCLEKWLNYWNTTCPLCRNLMMLPQEVEEEEDSCPM 155
>gb|AGQ44778.1| RING-H2 zinc finger protein [Camellia sinensis]
Length = 156
Score = 73.9 bits (180), Expect = 4e-11
Identities = 31/43 (72%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Frame = +3
Query: 6 CGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQ---ALEEDACPM 125
CGHVFHK+CLEKWL YWNVTCPLCR M+PQ EED PM
Sbjct: 114 CGHVFHKMCLEKWLKYWNVTCPLCRTRMLPQEEEEEEEDTAPM 156
>ref|XP_010321079.1| PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X2
[Solanum lycopersicum]
Length = 149
Score = 72.8 bits (177), Expect = 8e-11
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQ 98
SCGHVFHKLCLEKWL WNVTCPLCRNY+MP+
Sbjct: 111 SCGHVFHKLCLEKWLKNWNVTCPLCRNYIMPK 142
>ref|XP_004239288.2| PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X1
[Solanum lycopersicum] gi|723699826|ref|XP_010321077.1|
PREDICTED: probable E3 ubiquitin-protein ligase XERICO
isoform X1 [Solanum lycopersicum]
gi|723699829|ref|XP_004239290.2| PREDICTED: probable E3
ubiquitin-protein ligase XERICO isoform X1 [Solanum
lycopersicum]
Length = 153
Score = 72.8 bits (177), Expect = 8e-11
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQ 98
SCGHVFHKLCLEKWL WNVTCPLCRNY+MP+
Sbjct: 111 SCGHVFHKLCLEKWLKNWNVTCPLCRNYIMPK 142
>ref|XP_012485640.1| PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Gossypium
raimondii] gi|823125723|ref|XP_012485647.1| PREDICTED:
probable E3 ubiquitin-protein ligase XERICO [Gossypium
raimondii] gi|763738780|gb|KJB06279.1| hypothetical
protein B456_001G190300 [Gossypium raimondii]
gi|763738781|gb|KJB06280.1| hypothetical protein
B456_001G190300 [Gossypium raimondii]
Length = 162
Score = 72.4 bits (176), Expect = 1e-10
Identities = 26/32 (81%), Positives = 31/32 (96%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQ 98
SCGH+FHK+CLEKWLNYWNVTCPLCRN ++P+
Sbjct: 124 SCGHLFHKVCLEKWLNYWNVTCPLCRNALLPE 155
>gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]
Length = 144
Score = 72.4 bits (176), Expect = 1e-10
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQ 98
SCGHVFHKLCLEKWL WNVTCPLCR+Y+MPQ
Sbjct: 112 SCGHVFHKLCLEKWLKNWNVTCPLCRDYIMPQ 143
>ref|XP_003601512.1| RING-H2 finger protein ATL4K [Medicago truncatula]
Length = 189
Score = 71.2 bits (173), Expect = 2e-10
Identities = 28/49 (57%), Positives = 39/49 (79%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDACPM*FNTSSHC 149
SCGHVFHK+CLEKWL+YWN+TCPLCR+ ++P+ ++ +C F+ S C
Sbjct: 117 SCGHVFHKVCLEKWLDYWNITCPLCRSPLIPE--DDASCLCAFDYSEAC 163
>ref|XP_011009089.1| PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Populus
euphratica] gi|743929710|ref|XP_011009090.1| PREDICTED:
probable E3 ubiquitin-protein ligase XERICO [Populus
euphratica] gi|743929712|ref|XP_011009091.1| PREDICTED:
probable E3 ubiquitin-protein ligase XERICO [Populus
euphratica]
Length = 153
Score = 70.1 bits (170), Expect = 5e-10
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDA 116
SCGH+FHK+CLEKWL+YWN+TCPLCR ++P EEDA
Sbjct: 115 SCGHIFHKMCLEKWLDYWNITCPLCRTPLLP---EEDA 149
>ref|XP_002321207.1| hypothetical protein POPTR_0014s16830g [Populus trichocarpa]
gi|566204675|ref|XP_006375582.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
gi|566204677|ref|XP_006375583.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
gi|566204679|ref|XP_006375584.1| putative RING zinc
finger family protein [Populus trichocarpa]
gi|566204682|ref|XP_006375585.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
gi|222861980|gb|EEE99522.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
gi|550324363|gb|ERP53379.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
gi|550324364|gb|ERP53380.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
gi|550324365|gb|ERP53381.1| putative RING zinc finger
family protein [Populus trichocarpa]
gi|550324366|gb|ERP53382.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
Length = 153
Score = 70.1 bits (170), Expect = 5e-10
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDA 116
SCGH+FHK+CLEKWL+YWN+TCPLCR ++P EEDA
Sbjct: 115 SCGHIFHKMCLEKWLDYWNITCPLCRTPLLP---EEDA 149
>gb|ABK93992.1| unknown [Populus trichocarpa]
Length = 74
Score = 70.1 bits (170), Expect = 5e-10
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +3
Query: 3 SCGHVFHKLCLEKWLNYWNVTCPLCRNYMMPQALEEDA 116
SCGH+FHK+CLEKWL+YWN+TCPLCR ++P EEDA
Sbjct: 36 SCGHIFHKMCLEKWLDYWNITCPLCRTPLLP---EEDA 70