BLASTX nr result
ID: Forsythia23_contig00039799
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia23_contig00039799 (368 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_008354068.1| PREDICTED: uncharacterized protein LOC103417... 55 2e-06 emb|CCH50976.1| T4.15 [Malus x robusta] 54 4e-06 ref|XP_010107867.1| DNA-directed RNA polymerase II subunit [Moru... 57 6e-06 >ref|XP_008354068.1| PREDICTED: uncharacterized protein LOC103417687 [Malus domestica] Length = 907 Score = 54.7 bits (130), Expect(2) = 2e-06 Identities = 26/50 (52%), Positives = 31/50 (62%) Frame = -1 Query: 260 DVMHRIILGWMKWKSGTRFL*DWNTSIKLKSVFYRTFTRLDMLCGSELWS 111 D+ HRI GWMKWKS + L D +KLK FYRT R ML G+E W+ Sbjct: 734 DLNHRIQAGWMKWKSASGVLCDRRMPLKLKGKFYRTAIRXAMLYGTECWA 783 Score = 23.5 bits (49), Expect(2) = 2e-06 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 112 HQHAKCVYNMKIAEMRAPR*LFGYT 38 HQH V+ M +AEMR R + G+T Sbjct: 786 HQH---VHKMXVAEMRMLRWMCGHT 807 >emb|CCH50976.1| T4.15 [Malus x robusta] Length = 986 Score = 53.9 bits (128), Expect(2) = 4e-06 Identities = 26/50 (52%), Positives = 31/50 (62%) Frame = -1 Query: 260 DVMHRIILGWMKWKSGTRFL*DWNTSIKLKSVFYRTFTRLDMLCGSELWS 111 D+ HRI GWMKWKS + L D +KLK FYRT R ML G+E W+ Sbjct: 813 DLNHRIQAGWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAMLYGTECWA 862 Score = 23.1 bits (48), Expect(2) = 4e-06 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 112 HQHAKCVYNMKIAEMRAPR*LFGYT 38 HQH V+ M +AEMR R + G+T Sbjct: 865 HQH---VHKMGVAEMRMLRWMCGHT 886 >ref|XP_010107867.1| DNA-directed RNA polymerase II subunit [Morus notabilis] gi|587930138|gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus notabilis] Length = 588 Score = 56.6 bits (135), Expect = 6e-06 Identities = 28/57 (49%), Positives = 37/57 (64%) Frame = -1 Query: 281 QFVNFVKDVMHRIILGWMKWKSGTRFL*DWNTSIKLKSVFYRTFTRLDMLCGSELWS 111 Q+ + +D+ H+I +GW+KWK+ T L D IKLK FYRT RL ML GSE W+ Sbjct: 397 QYEDIEEDIQHKIKVGWVKWKNATGVLCDDKMPIKLKGKFYRT-VRLAMLYGSERWA 452