BLASTX nr result

ID: Forsythia23_contig00039446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00039446
         (322 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009601125.1| PREDICTED: F-box protein At4g22280 isoform X...    59   1e-06
ref|XP_009601122.1| PREDICTED: F-box/LRR-repeat protein At3g5919...    59   1e-06
emb|CDP06298.1| unnamed protein product [Coffea canephora]             57   6e-06

>ref|XP_009601125.1| PREDICTED: F-box protein At4g22280 isoform X3 [Nicotiana
           tomentosiformis]
          Length = 419

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 29/84 (34%), Positives = 45/84 (53%)
 Frame = -3

Query: 320 DDWNFEVMPCCLESSLKIFNINVLYGQEAPMHLLKYFLKHSTVLERAVICCPSSILDDMR 141
           DDWN   +P C  SSLK    +  +G    +  L+  +K++ VLE+  I C      D +
Sbjct: 336 DDWNLRYVPSCFLSSLKTVTYSNFHGNNTEISFLRNLVKNTIVLEKLNIMCSKRRFGDPK 395

Query: 140 KREEFRNQLLVLPRSSENCAIEVL 69
           K+ E ++QL  L R S +CAI+ +
Sbjct: 396 KQNEVKDQLQSLHRGSMSCAIKFM 419


>ref|XP_009601122.1| PREDICTED: F-box/LRR-repeat protein At3g59190 isoform X1 [Nicotiana
           tomentosiformis] gi|697184194|ref|XP_009601123.1|
           PREDICTED: F-box/LRR-repeat protein At3g59190 isoform X1
           [Nicotiana tomentosiformis]
          Length = 471

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 29/84 (34%), Positives = 45/84 (53%)
 Frame = -3

Query: 320 DDWNFEVMPCCLESSLKIFNINVLYGQEAPMHLLKYFLKHSTVLERAVICCPSSILDDMR 141
           DDWN   +P C  SSLK    +  +G    +  L+  +K++ VLE+  I C      D +
Sbjct: 388 DDWNLRYVPSCFLSSLKTVTYSNFHGNNTEISFLRNLVKNTIVLEKLNIMCSKRRFGDPK 447

Query: 140 KREEFRNQLLVLPRSSENCAIEVL 69
           K+ E ++QL  L R S +CAI+ +
Sbjct: 448 KQNEVKDQLQSLHRGSMSCAIKFM 471


>emb|CDP06298.1| unnamed protein product [Coffea canephora]
          Length = 472

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 27/82 (32%), Positives = 47/82 (57%)
 Frame = -3

Query: 320 DDWNFEVMPCCLESSLKIFNINVLYGQEAPMHLLKYFLKHSTVLERAVICCPSSILDDMR 141
           +DW ++ +P C  + L+  +I  L G    + +L +FLKH+ VL++ VI     + + + 
Sbjct: 389 EDWEWDHVPECFSTHLRNIHIGDLCGYPYELSILGFFLKHAMVLQKMVISFSVDMTESLE 448

Query: 140 KREEFRNQLLVLPRSSENCAIE 75
           K+   R +LL LPR S +C I+
Sbjct: 449 KQGVIRAKLLALPRGSISCVID 470


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