BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00039314
         (1120 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]       198   2e-93
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   185   5e-83
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof...   168   9e-83
ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isof...   168   9e-83
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun...   172   4e-82
gb|KHG29144.1| DNA-directed RNA polymerase 3, chloroplastic -lik...   177   7e-82
ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   172   1e-81
gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium r...   176   4e-81
ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   176   4e-81
ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast ...   178   8e-81
ref|XP_012071554.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   183   2e-80
ref|XP_008452554.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   168   1e-79
ref|XP_009366215.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   172   2e-79
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   182   3e-79
ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   174   4e-77
ref|XP_011033373.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   173   1e-76
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...   171   2e-75
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...   181   2e-75
ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citr...   181   2e-75
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   182   4e-75

>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
          Length = 952

 Score =  198 bits (504), Expect(2) = 2e-93
 Identities = 97/149 (65%), Positives = 119/149 (79%), Gaps = 2/149 (1%)
 Frame = -3

Query: 866 SYSFPHTLKLPSLRNSAPLLTPPLSDSADDNYVESHQNLSNLQLIPNG-FSSNLTKTSSK 690
           S SFP  +KLPSL   AP L+ P+SDS+DDN+ E+  NL+ + + PNG  SS  +K    
Sbjct: 16  SSSFPRNVKLPSLHTPAPFLSHPVSDSSDDNFTENPGNLATMLVTPNGGISSEFSKELRD 75

Query: 689 RV-FIQDPPWVSSLFMKNLLFRSRNKSGVKIEYQEMERRKYYLLRRRQIKVETEAWENMV 513
           RV  IQDPPW+SSL++K+LLFR+RN+  VKIE++EMER KYY LRRRQIK ETEAWENMV
Sbjct: 76  RVVIIQDPPWISSLYIKSLLFRNRNRCDVKIEFKEMERHKYYELRRRQIKAETEAWENMV 135

Query: 512 EEYKELEREMCEKKLAPNLPYVKKLILGW 426
           +EYKELE+EMCEKK+APNLPY KKL+LGW
Sbjct: 136 KEYKELEKEMCEKKMAPNLPYFKKLMLGW 164



 Score =  173 bits (438), Expect(2) = 2e-93
 Identities = 89/145 (61%), Positives = 112/145 (77%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWFEPL  AI  EQ   + KK++ AFAP+ID+LP + MAVIVMHKIMGLLMMGGK D
Sbjct: 160 LMLGWFEPLTEAIRTEQSLQKPKKNRIAFAPYIDSLPPESMAVIVMHKIMGLLMMGGKQD 219

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKSLI 76
           RC+RVVEAA+QIG AIE EVRIH+FLEK+ K Q+  +  ESQ  S ++A  LRKRVK+L+
Sbjct: 220 RCIRVVEAALQIGKAIEQEVRIHAFLEKT-KHQKEAVASESQENSCEKAANLRKRVKNLV 278

Query: 75  RRNKVLEVQKLVRNEEFKSWGRDTQ 1
           RR + +EVQKLV++E  + W R+ Q
Sbjct: 279 RRGRGVEVQKLVKSENHEPWTREIQ 303


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
           vinifera]
          Length = 979

 Score =  185 bits (469), Expect(2) = 5e-83
 Identities = 96/146 (65%), Positives = 118/146 (80%), Gaps = 1/146 (0%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWFEPLR AI+KEQ++ RTKK K A+AP I+ LPADKMAVIVMHK+MGL+MM G ++
Sbjct: 187 LFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMM-GHEE 245

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQ-GISSKEALLLRKRVKSL 79
            CVRVV+AA+QIG+AIE EVRIHSFLEK++  +R   V  SQ G+  KE  +LRKRVKS 
Sbjct: 246 GCVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQEGLREKE--ILRKRVKSF 303

Query: 78  IRRNKVLEVQKLVRNEEFKSWGRDTQ 1
           IR+ K++EVQKLV+NEE   WGRDTQ
Sbjct: 304 IRKKKIIEVQKLVKNEEITPWGRDTQ 329



 Score =  152 bits (383), Expect(2) = 5e-83
 Identities = 93/213 (43%), Positives = 118/213 (55%), Gaps = 13/213 (6%)
 Frame = -3

Query: 1025 LASTAPFSPSPRAQLHLPXXXXXXXSWKRHKNPDFLPMSPSELPIFCENPY--------- 873
            +ASTA F P P A++  P           HK    LP+      +F  NP          
Sbjct: 1    MASTAVFLPIPHAKIQKPKKLD------HHKPHRTLPV------LFTSNPSPHFHTSTIS 48

Query: 872  ---LSSYSFPHTLKLPSLRNSAPLLTPPLSDSADDNYVESHQNLSNLQLIPNGFSSNLTK 702
               LSS SF H    PS  +++      L  S  +N +E+ Q+ SN+Q+          K
Sbjct: 49   KNSLSSSSFRHNFHSPSHSSNSEAQCHALPLSPTNNSIETLQDSSNIQV----------K 98

Query: 701  TSSKRVFIQDPPWVSSLFMKNLLFRSRNKS-GVKIEYQEMERRKYYLLRRRQIKVETEAW 525
             S  R+F+QDPPW+SS    +   R+R     VK+E++E ERR Y LLRRRQ+K ETEAW
Sbjct: 99   ESIPRIFVQDPPWISSFLFHDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEAW 158

Query: 524  ENMVEEYKELEREMCEKKLAPNLPYVKKLILGW 426
            E MVEEY+E+EREMCEKKLAPNLPYVK L LGW
Sbjct: 159  ERMVEEYREIEREMCEKKLAPNLPYVKALFLGW 191


>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
           gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
           superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score =  168 bits (426), Expect(2) = 9e-83
 Identities = 89/147 (60%), Positives = 116/147 (78%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLR--TKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGK 262
           L +GWFEP+R AI +EQK  +  +KK + A+AP I+ LPADKMAVIVMHK+MGL+M G +
Sbjct: 184 LFLGWFEPMREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVM-GAQ 242

Query: 261 DDRCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKS 82
           ++  V+VV+AA+ IGVAIE EVRIH+FLEK++  QR+   DE QG+ SKE  +L+KRV S
Sbjct: 243 ENGFVQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDEVQGL-SKEKEILKKRVNS 301

Query: 81  LIRRNKVLEVQKLVRNEEFKSWGRDTQ 1
           LIRR +++EVQKLV+NEE K WGRD Q
Sbjct: 302 LIRRRRLVEVQKLVKNEEIKPWGRDAQ 328



 Score =  167 bits (424), Expect(2) = 9e-83
 Identities = 101/201 (50%), Positives = 126/201 (62%), Gaps = 1/201 (0%)
 Frame = -3

Query: 1025 LASTAPFSPSPRAQLHLPXXXXXXXSWKRHKNPDFLPMSPSELPIFCENPYLSSYSFPHT 846
            +ASTA  S +   Q+  P         K HK P      P+  P        S  SFP  
Sbjct: 1    MASTASLSLTQTPQIQYPTRRKPPLPQKPHKKPLLFLPKPTLHP--------SLVSFPFP 52

Query: 845  LKLPSLRNSAPLLTPPLSDSADDNYVESHQNLSNLQLIPNGFSSN-LTKTSSKRVFIQDP 669
            L L S  N A     PL DS  DN+VE+ +N SN  L+P   S   L+  S+ R+FIQDP
Sbjct: 53   LNLNSPPNPARFC--PLHDSLHDNFVENIENPSNF-LLPKAQSHQILSPESTPRLFIQDP 109

Query: 668  PWVSSLFMKNLLFRSRNKSGVKIEYQEMERRKYYLLRRRQIKVETEAWENMVEEYKELER 489
            PW+S+LF+K L ++  N++ VKIE++E+E+RKY LLRRRQ+K ETEAWE MVEEY+EL+R
Sbjct: 110  PWISALFLKGL-YKMTNQT-VKIEHKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELQR 167

Query: 488  EMCEKKLAPNLPYVKKLILGW 426
            EMCEKKLAPNLPYVK L LGW
Sbjct: 168  EMCEKKLAPNLPYVKGLFLGW 188


>ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
           gi|508784242|gb|EOY31498.1| DNA/RNA polymerases
           superfamily protein isoform 3 [Theobroma cacao]
          Length = 927

 Score =  168 bits (426), Expect(2) = 9e-83
 Identities = 89/147 (60%), Positives = 116/147 (78%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLR--TKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGK 262
           L +GWFEP+R AI +EQK  +  +KK + A+AP I+ LPADKMAVIVMHK+MGL+M G +
Sbjct: 184 LFLGWFEPMREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVM-GAQ 242

Query: 261 DDRCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKS 82
           ++  V+VV+AA+ IGVAIE EVRIH+FLEK++  QR+   DE QG+ SKE  +L+KRV S
Sbjct: 243 ENGFVQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDEVQGL-SKEKEILKKRVNS 301

Query: 81  LIRRNKVLEVQKLVRNEEFKSWGRDTQ 1
           LIRR +++EVQKLV+NEE K WGRD Q
Sbjct: 302 LIRRRRLVEVQKLVKNEEIKPWGRDAQ 328



 Score =  167 bits (424), Expect(2) = 9e-83
 Identities = 101/201 (50%), Positives = 126/201 (62%), Gaps = 1/201 (0%)
 Frame = -3

Query: 1025 LASTAPFSPSPRAQLHLPXXXXXXXSWKRHKNPDFLPMSPSELPIFCENPYLSSYSFPHT 846
            +ASTA  S +   Q+  P         K HK P      P+  P        S  SFP  
Sbjct: 1    MASTASLSLTQTPQIQYPTRRKPPLPQKPHKKPLLFLPKPTLHP--------SLVSFPFP 52

Query: 845  LKLPSLRNSAPLLTPPLSDSADDNYVESHQNLSNLQLIPNGFSSN-LTKTSSKRVFIQDP 669
            L L S  N A     PL DS  DN+VE+ +N SN  L+P   S   L+  S+ R+FIQDP
Sbjct: 53   LNLNSPPNPARFC--PLHDSLHDNFVENIENPSNF-LLPKAQSHQILSPESTPRLFIQDP 109

Query: 668  PWVSSLFMKNLLFRSRNKSGVKIEYQEMERRKYYLLRRRQIKVETEAWENMVEEYKELER 489
            PW+S+LF+K L ++  N++ VKIE++E+E+RKY LLRRRQ+K ETEAWE MVEEY+EL+R
Sbjct: 110  PWISALFLKGL-YKMTNQT-VKIEHKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELQR 167

Query: 488  EMCEKKLAPNLPYVKKLILGW 426
            EMCEKKLAPNLPYVK L LGW
Sbjct: 168  EMCEKKLAPNLPYVKGLFLGW 188


>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
           gi|462398756|gb|EMJ04424.1| hypothetical protein
           PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score =  172 bits (437), Expect(2) = 4e-82
 Identities = 89/145 (61%), Positives = 111/145 (76%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWFEPLR AI +EQK+ +TKKHK AFAP ID LPADKMA+IVMHK+MGL+M+G +D 
Sbjct: 183 LFLGWFEPLREAIAREQKTQQTKKHKAAFAPHIDLLPADKMALIVMHKMMGLVMVGNQDG 242

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKSLI 76
            CV+VV+AA+ IG+AIE EVRIHSFLEK++  Q++      +   SKE  +LRKRV  LI
Sbjct: 243 -CVQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADEDGLSKEKEILRKRVNGLI 301

Query: 75  RRNKVLEVQKLVRNEEFKSWGRDTQ 1
           RR ++ EVQKL+  EE K WGRD Q
Sbjct: 302 RRKRLNEVQKLLIKEEMKPWGRDKQ 326



 Score =  161 bits (407), Expect(2) = 4e-82
 Identities = 97/200 (48%), Positives = 123/200 (61%)
 Frame = -3

Query: 1025 LASTAPFSPSPRAQLHLPXXXXXXXSWKRHKNPDFLPMSPSELPIFCENPYLSSYSFPHT 846
            +ASTA FSPSP+AQ +             HK   FL  S S   +F +  + SS  FP  
Sbjct: 1    MASTASFSPSPQAQTYTCSSRWSKAPKLNHK---FLFSSTSN-SLFFKPSHSSSTHFPLN 56

Query: 845  LKLPSLRNSAPLLTPPLSDSADDNYVESHQNLSNLQLIPNGFSSNLTKTSSKRVFIQDPP 666
            LK P      P+  PPL DS  DN VE   N  N Q+  + F     + S+ R+FIQDPP
Sbjct: 57   LKPPP----EPVHIPPLRDSIQDNIVE---NSMNFQIPMSEFHLITPQESAPRIFIQDPP 109

Query: 665  WVSSLFMKNLLFRSRNKSGVKIEYQEMERRKYYLLRRRQIKVETEAWENMVEEYKELERE 486
            W++SLF+K +  R+  +  +K+E +E+ERR Y +LRRRQIK ETEAWE MV+EYK+LE+ 
Sbjct: 110  WIASLFLKGIYKRANQE--LKLESKEIERRNYNVLRRRQIKAETEAWERMVDEYKDLEKV 167

Query: 485  MCEKKLAPNLPYVKKLILGW 426
            M EKKLAPNLPYVK L LGW
Sbjct: 168  MREKKLAPNLPYVKALFLGW 187


>gb|KHG29144.1| DNA-directed RNA polymerase 3, chloroplastic -like protein
           [Gossypium arboreum]
          Length = 1024

 Score =  177 bits (448), Expect(2) = 7e-82
 Identities = 95/147 (64%), Positives = 117/147 (79%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLR--TKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGK 262
           L +GWFEPLR AI KEQK  +  +KK + A+AP I+ LPADK+AVIVMHK+MGL+M G +
Sbjct: 178 LFLGWFEPLREAIAKEQKVQKGKSKKLRAAYAPHIELLPADKLAVIVMHKMMGLVM-GAE 236

Query: 261 DDRCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKS 82
           +D  V+VV+AA+ IGVAIE EVRIHSFLEK++  QR+ IVDE QG+ SKE  +LRKRV S
Sbjct: 237 EDGYVQVVQAAVHIGVAIEQEVRIHSFLEKTKNYQRKQIVDEVQGV-SKEKEILRKRVNS 295

Query: 81  LIRRNKVLEVQKLVRNEEFKSWGRDTQ 1
           LIRR ++ EVQKLV+NEE K WGRD Q
Sbjct: 296 LIRRRRLTEVQKLVKNEEIKPWGRDAQ 322



 Score =  156 bits (394), Expect(2) = 7e-82
 Identities = 88/174 (50%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
 Frame = -3

Query: 944 KRHKNPDFLPMSPSELPIFCENPYLSSYSFPHTLKLPSLRNSAPLLTPPLSDSADDNYVE 765
           K HK P F  +     P+    P+  S ++P          + P    PL DS  DN V+
Sbjct: 23  KPHKKPLF-SLPKQTFPLIFSFPFHRSLNYP----------TKPPRFLPLCDSLQDNIVQ 71

Query: 764 SHQNLSNLQLIPNGFSSN-LTKTSSKRVFIQDPPWVSSLFMKNLLFRSRNKSGVKIEYQE 588
           + +N  N  L+PN  S   L+  ++ R+FIQDPPW+S+LF K L ++  N++ VKIE++E
Sbjct: 72  NIENPKNF-LLPNAHSRQILSPETAPRIFIQDPPWISALFWKGL-YKMTNQT-VKIEHKE 128

Query: 587 MERRKYYLLRRRQIKVETEAWENMVEEYKELEREMCEKKLAPNLPYVKKLILGW 426
           +E+RKY LLRRRQ+K ETEAWE MVEEY+ELEREMCEKKLAPNLPYVK L LGW
Sbjct: 129 IEKRKYNLLRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPYVKGLFLGW 182


>ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Prunus
           mume]
          Length = 976

 Score =  172 bits (437), Expect(2) = 1e-81
 Identities = 89/145 (61%), Positives = 111/145 (76%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWFEPLR AI +EQK+ +TKKHK AFAP ID LPADKMA+IVMHK+MGL+M+G +D 
Sbjct: 183 LFLGWFEPLREAIAREQKTQQTKKHKAAFAPHIDLLPADKMALIVMHKMMGLVMVGNQDG 242

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKSLI 76
            CV+VV+AA+ IG+AIE EVRIHSFLEK++  Q++      +   SKE  +LRKRV  LI
Sbjct: 243 -CVQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADEDGLSKEKEILRKRVNGLI 301

Query: 75  RRNKVLEVQKLVRNEEFKSWGRDTQ 1
           RR ++ EVQKL+  EE K WGRD Q
Sbjct: 302 RRKRLNEVQKLLIKEEMKPWGRDKQ 326



 Score =  159 bits (403), Expect(2) = 1e-81
 Identities = 97/200 (48%), Positives = 122/200 (61%)
 Frame = -3

Query: 1025 LASTAPFSPSPRAQLHLPXXXXXXXSWKRHKNPDFLPMSPSELPIFCENPYLSSYSFPHT 846
            +ASTA FSPSP+ Q +             HK   FL  S S   +F +  + SS  FP +
Sbjct: 1    MASTASFSPSPQGQGYTCSSRWSKPPKLNHK---FLFSSTSN-SLFFKPSHSSSTHFPLS 56

Query: 845  LKLPSLRNSAPLLTPPLSDSADDNYVESHQNLSNLQLIPNGFSSNLTKTSSKRVFIQDPP 666
            LK P      P+  PPL DS  DN VE   N  N Q+  + F     + S  R+FIQDPP
Sbjct: 57   LKPPP----EPVHIPPLRDSIQDNIVE---NSMNFQIPMSEFHLITPQESGPRIFIQDPP 109

Query: 665  WVSSLFMKNLLFRSRNKSGVKIEYQEMERRKYYLLRRRQIKVETEAWENMVEEYKELERE 486
            W++SLF+K +  R+  +  +K+E +E+ERR Y LLRRRQIK ETEAWE MV+EYK+LE+ 
Sbjct: 110  WIASLFLKGIYKRANQE--LKLESKEIERRNYNLLRRRQIKAETEAWERMVDEYKDLEKV 167

Query: 485  MCEKKLAPNLPYVKKLILGW 426
            M EKKLAPNLPYVK L LGW
Sbjct: 168  MREKKLAPNLPYVKALFLGW 187


>gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score =  176 bits (445), Expect(2) = 4e-81
 Identities = 95/147 (64%), Positives = 116/147 (78%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLR--TKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGK 262
           L +GWFEPLR AI KEQK  +   KK + A+AP I+ LPADK+AVIVMHK+MGL+M G +
Sbjct: 178 LFLGWFEPLREAIAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVM-GAE 236

Query: 261 DDRCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKS 82
           +D  V+VV+AA+ IGVAIE EVRIHSFLEK++  QR+ IVDE QG +SKE  +LRKRV S
Sbjct: 237 EDGYVQVVQAAVHIGVAIEQEVRIHSFLEKTKNYQRKQIVDEVQG-ASKEKEILRKRVNS 295

Query: 81  LIRRNKVLEVQKLVRNEEFKSWGRDTQ 1
           LIRR ++ EVQKLV+NEE K WGRD Q
Sbjct: 296 LIRRRRLTEVQKLVKNEEIKPWGRDAQ 322



 Score =  155 bits (391), Expect(2) = 4e-81
 Identities = 89/166 (53%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
 Frame = -3

Query: 908 PSELPIFCENPYLSSYSFPHTLKLPSLRN-SAPLLTP---PLSDSADDNYVESHQNLSNL 741
           P + P+F     L   +FP     P  R+ + P   P   PL DS  DN V++ +N   L
Sbjct: 24  PHKKPLFS----LPKQAFPLIFSFPIHRSLNYPTKPPRFLPLCDSLQDNIVQNIENPKKL 79

Query: 740 QLIPNGFSSN-LTKTSSKRVFIQDPPWVSSLFMKNLLFRSRNKSGVKIEYQEMERRKYYL 564
            L+PN  S   L+  S+ R+FIQDPPW+S+LF K L ++  N++ VKIE++E+E+RKY L
Sbjct: 80  -LLPNAHSRQILSPESAPRIFIQDPPWISALFWKGL-YKMTNQT-VKIEHKEIEKRKYNL 136

Query: 563 LRRRQIKVETEAWENMVEEYKELEREMCEKKLAPNLPYVKKLILGW 426
           LRRRQ+K ETEAWE MVEEY+ELEREMCEKKLAPNLPYVK L LGW
Sbjct: 137 LRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPYVKGLFLGW 182


>ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Gossypium
           raimondii] gi|763786877|gb|KJB53873.1| hypothetical
           protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score =  176 bits (445), Expect(2) = 4e-81
 Identities = 95/147 (64%), Positives = 116/147 (78%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLR--TKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGK 262
           L +GWFEPLR AI KEQK  +   KK + A+AP I+ LPADK+AVIVMHK+MGL+M G +
Sbjct: 178 LFLGWFEPLREAIAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVM-GAE 236

Query: 261 DDRCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKS 82
           +D  V+VV+AA+ IGVAIE EVRIHSFLEK++  QR+ IVDE QG +SKE  +LRKRV S
Sbjct: 237 EDGYVQVVQAAVHIGVAIEQEVRIHSFLEKTKNYQRKQIVDEVQG-ASKEKEILRKRVNS 295

Query: 81  LIRRNKVLEVQKLVRNEEFKSWGRDTQ 1
           LIRR ++ EVQKLV+NEE K WGRD Q
Sbjct: 296 LIRRRRLTEVQKLVKNEEIKPWGRDAQ 322



 Score =  155 bits (391), Expect(2) = 4e-81
 Identities = 89/166 (53%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
 Frame = -3

Query: 908 PSELPIFCENPYLSSYSFPHTLKLPSLRN-SAPLLTP---PLSDSADDNYVESHQNLSNL 741
           P + P+F     L   +FP     P  R+ + P   P   PL DS  DN V++ +N   L
Sbjct: 24  PHKKPLFS----LPKQAFPLIFSFPIHRSLNYPTKPPRFLPLCDSLQDNIVQNIENPKKL 79

Query: 740 QLIPNGFSSN-LTKTSSKRVFIQDPPWVSSLFMKNLLFRSRNKSGVKIEYQEMERRKYYL 564
            L+PN  S   L+  S+ R+FIQDPPW+S+LF K L ++  N++ VKIE++E+E+RKY L
Sbjct: 80  -LLPNAHSRQILSPESAPRIFIQDPPWISALFWKGL-YKMTNQT-VKIEHKEIEKRKYNL 136

Query: 563 LRRRQIKVETEAWENMVEEYKELEREMCEKKLAPNLPYVKKLILGW 426
           LRRRQ+K ETEAWE MVEEY+ELEREMCEKKLAPNLPYVK L LGW
Sbjct: 137 LRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPYVKGLFLGW 182


>ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast precursor, putative
           [Ricinus communis] gi|223532193|gb|EEF33998.1|
           DNA-directed RNA polymerase 3B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 1000

 Score =  178 bits (451), Expect(2) = 8e-81
 Identities = 90/145 (62%), Positives = 114/145 (78%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWFEPL+  I+ EQ   R+KK+K AFAP I+ LPADKMAVIVMHK++GLLM+G  +D
Sbjct: 194 LFLGWFEPLKEGIKSEQNLQRSKKNKAAFAPHIELLPADKMAVIVMHKMVGLLMVG-HED 252

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKSLI 76
            CV +V+AA+QIG+AIE EVRIH+FLEK++  QR+  +  +Q    KE  +LRKRV SLI
Sbjct: 253 GCVPLVQAAVQIGMAIEQEVRIHNFLEKTKNYQRKKTISGAQESLGKEKEILRKRVNSLI 312

Query: 75  RRNKVLEVQKLVRNEEFKSWGRDTQ 1
           RR K++EVQKLV+NEE K WGRDTQ
Sbjct: 313 RRKKLIEVQKLVKNEEMKPWGRDTQ 337



 Score =  151 bits (382), Expect(2) = 8e-81
 Identities = 93/184 (50%), Positives = 118/184 (64%), Gaps = 11/184 (5%)
 Frame = -3

Query: 944 KRHKNPDFLPMSPSELPIFCENPYLSSYSFPHTLKLPSLRNSAPLLTPPLSDSADDNYVE 765
           K HKN  FL + P+   +F  +  LSS SFP   K P  RN  P    PL D+ +++ +E
Sbjct: 24  KNHKNLHFLSV-PTSHSLFTNS--LSSSSFPLITKFP--RNLLPF--HPLHDAVEEHLLE 76

Query: 764 --------SHQNLSNL---QLIPNGFSSNLTKTSSKRVFIQDPPWVSSLFMKNLLFRSRN 618
                   +HQ L  L    L  N     L + SS+RVFIQDPPW+S+LF K L ++  N
Sbjct: 77  DLVENPIGNHQKLETLIKLDLPTNHNHQVLPEESSRRVFIQDPPWISALFFKGL-YKIPN 135

Query: 617 KSGVKIEYQEMERRKYYLLRRRQIKVETEAWENMVEEYKELEREMCEKKLAPNLPYVKKL 438
           K  VK+E++++E+RKY LLRRRQI+ ETEAWE MVEEYK L +EMCE+KLAPNLPYVK L
Sbjct: 136 KE-VKLEFKDIEKRKYNLLRRRQIREETEAWERMVEEYKALVKEMCERKLAPNLPYVKGL 194

Query: 437 ILGW 426
            LGW
Sbjct: 195 FLGW 198


>ref|XP_012071554.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Jatropha
           curcas]
          Length = 993

 Score =  183 bits (464), Expect(2) = 2e-80
 Identities = 91/145 (62%), Positives = 119/145 (82%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWFEPL+ AIE EQK  R+KK K+AFAP I+ LPADKMA+IVMHK+MGL+M+G  +D
Sbjct: 201 LFLGWFEPLKEAIEAEQKLQRSKKQKSAFAPHIELLPADKMALIVMHKMMGLMMVG-HED 259

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKSLI 76
            CV VV+AA+QIG+A+E EVRIH+FLEK++  QR++ V ++Q   SKE  +LRKR+ +LI
Sbjct: 260 GCVPVVQAAVQIGMAVEQEVRIHNFLEKTKSFQRKNAVGDAQESLSKEKEVLRKRINNLI 319

Query: 75  RRNKVLEVQKLVRNEEFKSWGRDTQ 1
           RR ++++VQKLVRNEE K WGRDTQ
Sbjct: 320 RRKRLIQVQKLVRNEETKPWGRDTQ 344



 Score =  145 bits (365), Expect(2) = 2e-80
 Identities = 98/218 (44%), Positives = 125/218 (57%), Gaps = 18/218 (8%)
 Frame = -3

Query: 1025 LASTAPFSPSPRAQLHLPXXXXXXXS----WKRHKNPDFL--PMSPSELPIFCENPYLSS 864
            +ASTA  +   RAQ+  P            +K HKN  FL  P+S S       N  LSS
Sbjct: 1    MASTATLTQ--RAQIQYPNWSIKPPKFNKIYKPHKNLLFLSVPISHS-----LSNTSLSS 53

Query: 863  YSFPHTLKLPSLRNSAPLLTPPLSDSADDNYVESHQN-LSNLQLIPNGFSSNLTKTSS-- 693
             SFP   K P  R   P  + PL D+ +++ +E   N + NLQ   N    +L   SS  
Sbjct: 54   SSFPLNPKFP--RKLLP--SHPLHDATEEHLLEDMDNSMPNLQNFENLIKFDLPSCSSQN 109

Query: 692  ---------KRVFIQDPPWVSSLFMKNLLFRSRNKSGVKIEYQEMERRKYYLLRRRQIKV 540
                     KRVFIQDPPW+S+LF+K L   +  K   K+E++++E+RKY LLRRRQI+ 
Sbjct: 110  HQILGQESPKRVFIQDPPWISALFLKGLYKVANRK--FKVEFKDIEKRKYNLLRRRQIRE 167

Query: 539  ETEAWENMVEEYKELEREMCEKKLAPNLPYVKKLILGW 426
            ETEAWE M +EYK + REMC+KKLAPNLPYVK L LGW
Sbjct: 168  ETEAWERMADEYKGMVREMCDKKLAPNLPYVKGLFLGW 205


>ref|XP_008452554.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Cucumis
           melo]
          Length = 975

 Score =  168 bits (425), Expect(2) = 1e-79
 Identities = 89/145 (61%), Positives = 114/145 (78%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWFEPL+ AIEKEQK+ R+KK K AFAP I+ L ADK+AVIVM+K+MGLLM+  + D
Sbjct: 184 LFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMV-AQQD 242

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKSLI 76
            CV+VV+AA+QIG AIE EVRI SFLEK+R  QR  +  +++ + SKE  +LRKRV   I
Sbjct: 243 CCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECL-SKEKEVLRKRVNGFI 301

Query: 75  RRNKVLEVQKLVRNEEFKSWGRDTQ 1
           RR ++ EVQKL++ EEFK+WGRDTQ
Sbjct: 302 RRRRLKEVQKLLKKEEFKAWGRDTQ 326



 Score =  157 bits (398), Expect(2) = 1e-79
 Identities = 91/200 (45%), Positives = 118/200 (59%)
 Frame = -3

Query: 1025 LASTAPFSPSPRAQLHLPXXXXXXXSWKRHKNPDFLPMSPSELPIFCENPYLSSYSFPHT 846
            + +TA F P+ +A +H         +WK+                   N  LSS SFP  
Sbjct: 1    MTTTASFFPTLQAPIH------GSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPIN 54

Query: 845  LKLPSLRNSAPLLTPPLSDSADDNYVESHQNLSNLQLIPNGFSSNLTKTSSKRVFIQDPP 666
                    S P    PL+DS  +N+ E+  N  NLQ+  +       + S +R+FIQDPP
Sbjct: 55   FD----STSQPFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITREESGQRIFIQDPP 110

Query: 665  WVSSLFMKNLLFRSRNKSGVKIEYQEMERRKYYLLRRRQIKVETEAWENMVEEYKELERE 486
            W++SLF+K L ++   K  VK+E+ ++E+RKY LLRRRQIK ETEAWE MV+EYKELERE
Sbjct: 111  WIASLFLKGL-YKCVQKE-VKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELERE 168

Query: 485  MCEKKLAPNLPYVKKLILGW 426
            MCEKKLAPNLPYVK L LGW
Sbjct: 169  MCEKKLAPNLPYVKTLFLGW 188


>ref|XP_009366215.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Pyrus x
           bretschneideri]
          Length = 972

 Score =  172 bits (436), Expect(2) = 2e-79
 Identities = 91/147 (61%), Positives = 113/147 (76%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWFEPLR AI +EQ+  +TKKHK AFAP ID LP DKMA+IVMHK+MGL+M+G +D 
Sbjct: 179 LFLGWFEPLREAIAREQQVQQTKKHKAAFAPHIDLLPPDKMALIVMHKMMGLVMVGNQDG 238

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRD--IVDESQGISSKEALLLRKRVKS 82
            CV+VV+AA+ IG+AIE EVRIHSFLEK++  QR+   + DE   I  KE  +LRKRV  
Sbjct: 239 -CVQVVQAAVHIGMAIEQEVRIHSFLEKTKNFQRKKTAVADEDSLIKEKE--ILRKRVNV 295

Query: 81  LIRRNKVLEVQKLVRNEEFKSWGRDTQ 1
           LI+R ++ EVQKL+  EEFK WGRDTQ
Sbjct: 296 LIKRKRLREVQKLLVKEEFKPWGRDTQ 322



 Score =  152 bits (385), Expect(2) = 2e-79
 Identities = 98/205 (47%), Positives = 128/205 (62%), Gaps = 5/205 (2%)
 Frame = -3

Query: 1025 LASTAPFSPSPRAQLHLPXXXXXXXSWKR-----HKNPDFLPMSPSELPIFCENPYLSSY 861
            +ASTA FSPSP+AQ +         +W++     HK   FL  S S   +F   P LS+ 
Sbjct: 1    MASTASFSPSPQAQTY-------SSTWRKPPKLSHK---FLFSSASNRLVF--KPSLST- 47

Query: 860  SFPHTLKLPSLRNSAPLLTPPLSDSADDNYVESHQNLSNLQLIPNGFSSNLTKTSSKRVF 681
             FP +L+ P      P+L+  + DS  DN VE   N  NLQL    F       S+ R+F
Sbjct: 48   PFPLSLQPPP----EPVLSHLVRDSVQDNLVE---NSMNLQLPIREFHLITPDESAPRIF 100

Query: 680  IQDPPWVSSLFMKNLLFRSRNKSGVKIEYQEMERRKYYLLRRRQIKVETEAWENMVEEYK 501
            IQDPPW+++LF+K +  ++  +  +K+E +E++RRKY LLRRRQIK ETEAWE MVEEYK
Sbjct: 101  IQDPPWIAALFLKGMYKKANQE--LKLESKEIDRRKYNLLRRRQIKAETEAWERMVEEYK 158

Query: 500  ELEREMCEKKLAPNLPYVKKLILGW 426
            +LER M EKKLAP+LPYVK L LGW
Sbjct: 159  DLERVMREKKLAPSLPYVKTLFLGW 183


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Fragaria
           vesca subsp. vesca]
          Length = 973

 Score =  182 bits (463), Expect(2) = 3e-79
 Identities = 93/145 (64%), Positives = 114/145 (78%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWFEPLR AI KEQK+ +TKKHK AFAP ID LPADKMA+IVMHK+MGL+MMG +D 
Sbjct: 180 LFLGWFEPLREAIAKEQKAQQTKKHKQAFAPHIDLLPADKMALIVMHKLMGLVMMGNQDG 239

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKSLI 76
            CV+VV+AA+ IG+AIE EVRIHSFLEKS+  QR+      +   SKE  +LRKRV  LI
Sbjct: 240 -CVQVVQAAVHIGMAIEQEVRIHSFLEKSKSLQRKKTSVADEDGLSKEKEILRKRVNGLI 298

Query: 75  RRNKVLEVQKLVRNEEFKSWGRDTQ 1
           RR +++EVQKL++ E+ K WGRDTQ
Sbjct: 299 RRKRLVEVQKLLKKEDMKPWGRDTQ 323



 Score =  141 bits (356), Expect(2) = 3e-79
 Identities = 94/201 (46%), Positives = 117/201 (58%), Gaps = 1/201 (0%)
 Frame = -3

Query: 1025 LASTAPFSPSPRAQLHLPXXXXXXXSWKRHKNPDFLPMSPSELPIFCENPYLSSYS-FPH 849
            +ASTA  S S  A  H           K  K   FL  S S        P LSS + FP 
Sbjct: 1    MASTASSSISATAT-HSWRRPPKLNPTKSLKTLHFLFNSTSNSNSLFFKPSLSSSTHFPL 59

Query: 848  TLKLPSLRNSAPLLTPPLSDSADDNYVESHQNLSNLQLIPNGFSSNLTKTSSKRVFIQDP 669
            +L+ P      P+   PL+DS  DN VE+ +N    Q+            S  R+FIQDP
Sbjct: 60   SLRPPP----DPIQFHPLNDSVQDNLVENLENSIKFQV----------PISEPRIFIQDP 105

Query: 668  PWVSSLFMKNLLFRSRNKSGVKIEYQEMERRKYYLLRRRQIKVETEAWENMVEEYKELER 489
            PW++SLF+K + F+  NK  +K+E +E++RRKY LLRRRQIK ETEAWE MVE+YK+LER
Sbjct: 106  PWIASLFLKGM-FKKVNKE-LKVESKEIDRRKYNLLRRRQIKAETEAWEKMVEDYKDLER 163

Query: 488  EMCEKKLAPNLPYVKKLILGW 426
             M EKKLAP+LPYVK L LGW
Sbjct: 164  VMREKKLAPSLPYVKALFLGW 184


>ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Populus
           euphratica]
          Length = 983

 Score =  174 bits (440), Expect(2) = 4e-77
 Identities = 88/143 (61%), Positives = 113/143 (79%)
 Frame = -2

Query: 429 VGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDDRC 250
           +GWFEPL+ AIEKEQK  ++KK K+AF+P I+ LPADKMAVIVMHK+MGLLM+G  +D C
Sbjct: 192 LGWFEPLKEAIEKEQKMEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLLMVG-HEDGC 250

Query: 249 VRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKSLIRR 70
           VRVV+AA+QIG+AIE EVRIH+FLEK++  QR+  + + Q    KE  +LRKRV SLIRR
Sbjct: 251 VRVVQAAVQIGMAIEQEVRIHNFLEKTKNHQRKKTMHDVQESMDKEKEMLRKRVNSLIRR 310

Query: 69  NKVLEVQKLVRNEEFKSWGRDTQ 1
            +++EVQ LV+ +E K W R TQ
Sbjct: 311 KRLMEVQNLVKQDETKPWSRGTQ 333



 Score =  143 bits (361), Expect(2) = 4e-77
 Identities = 89/189 (47%), Positives = 113/189 (59%), Gaps = 15/189 (7%)
 Frame = -3

Query: 947 WKRHKNPDFLPMSPSELPIFCENPYLSSYSFPHTLKLPS--LRNSAPLLTP-----PLSD 789
           W   K+P F    P +   F  NP   S S P ++   S  L +  PLL P     PL D
Sbjct: 14  WTTSKHPRF--HKPYKNLHFLSNPTSHSLSNPSSIYSSSFPLNSKFPLLNPSLPFHPLHD 71

Query: 788 SADDNYVE--------SHQNLSNLQLIPNGFSSNLTKTSSKRVFIQDPPWVSSLFMKNLL 633
           S+ D  +E        SHQ L  L      F   +   SSKRVFIQDPPW+S+ F K + 
Sbjct: 72  SSHDRLLEDFEIPTICSHQKLETLIK----FDQIMHGESSKRVFIQDPPWISAHFWKGV- 126

Query: 632 FRSRNKSGVKIEYQEMERRKYYLLRRRQIKVETEAWENMVEEYKELEREMCEKKLAPNLP 453
           ++  NK  VK+E++++E+RKY LLRRRQI+ ETEAWE M +EY+ L REMCE+KLAPNLP
Sbjct: 127 YKIANKK-VKVEFKDIEKRKYNLLRRRQIREETEAWERMADEYRGLVREMCERKLAPNLP 185

Query: 452 YVKKLILGW 426
           YVK L+LGW
Sbjct: 186 YVKGLLLGW 194


>ref|XP_011033373.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Populus euphratica]
          Length = 982

 Score =  173 bits (438), Expect(2) = 1e-76
 Identities = 87/145 (60%), Positives = 114/145 (78%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWFEPL+ AIE+EQK  ++KK K+AF+P+I+ LPADKMAVIVMHK+MGL+M+G  +D
Sbjct: 189 LFLGWFEPLKEAIEREQKLEKSKKQKSAFSPYIELLPADKMAVIVMHKMMGLVMVG-HED 247

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKSLI 76
            CVRVV+AA+QIG+AIE EVRIH+FLEK++  QR+  + + Q    KE  +LRKRV SLI
Sbjct: 248 GCVRVVQAAVQIGIAIEQEVRIHNFLEKTKNHQRKKTMHDVQESMDKEKEMLRKRVNSLI 307

Query: 75  RRNKVLEVQKLVRNEEFKSWGRDTQ 1
           RR +++EVQ LV  +E K W RD Q
Sbjct: 308 RRKRLMEVQNLVIQDETKPWSRDKQ 332



 Score =  142 bits (359), Expect(2) = 1e-76
 Identities = 96/211 (45%), Positives = 123/211 (58%), Gaps = 11/211 (5%)
 Frame = -3

Query: 1025 LASTAPFS-------PSPRAQLHLPXXXXXXXSWKRHKNPDFLPMSPSELPIFCENPYLS 867
            +AST PFS        S   + H P           +KN  FL  +PS   +   NP+LS
Sbjct: 1    MASTPPFSIQHPTWTTSKTLKFHEP-----------YKNLHFLS-NPSSHSL--SNPFLS 46

Query: 866  SYSFPHTLKLPSLRNSAPLLTPPLSDSADDNYVESHQ--NLSNLQLIPN--GFSSNLTKT 699
            S SFP   KL  L  + PLL  PL DS+ D  +E  +   ++N Q +     F   +   
Sbjct: 47   SSSFPLNPKLSIL--NPPLLFHPLHDSSHDRLLEDFEIPTINNHQKLETLIKFDQIVHGE 104

Query: 698  SSKRVFIQDPPWVSSLFMKNLLFRSRNKSGVKIEYQEMERRKYYLLRRRQIKVETEAWEN 519
            SSKRVFI+D PW+S+L+ K    +  NK  VK+E +++E+RKY LLRRRQI+ ETEAWE 
Sbjct: 105  SSKRVFIRDSPWISALYWKGT-HKIANKK-VKLELKDIEKRKYNLLRRRQIREETEAWER 162

Query: 518  MVEEYKELEREMCEKKLAPNLPYVKKLILGW 426
            M EEY  L +EMCE+KLAPNLPYVK L LGW
Sbjct: 163  MAEEYTGLVKEMCERKLAPNLPYVKSLFLGW 193


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
           gi|222854390|gb|EEE91937.1| hypothetical protein
           POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score =  171 bits (432), Expect(2) = 2e-75
 Identities = 87/145 (60%), Positives = 113/145 (77%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWFEPL+ AIE+EQK  ++KK K+AF+P I+ LPADKMAVIVMHK+MGL+M+G  +D
Sbjct: 189 LFLGWFEPLKEAIEREQKLEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLVMVG-HED 247

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKSLI 76
            CVRVV+AA+QIG+AIE EVRIH+FLEK++  QR+  + + Q    KE  +LRKRV SLI
Sbjct: 248 GCVRVVQAAVQIGIAIEQEVRIHNFLEKTKNHQRKKTMHDVQESMDKEKEMLRKRVNSLI 307

Query: 75  RRNKVLEVQKLVRNEEFKSWGRDTQ 1
           RR +++EVQ LV  +E K W RD Q
Sbjct: 308 RRKRLMEVQNLVIQDETKPWNRDKQ 332



 Score =  141 bits (355), Expect(2) = 2e-75
 Identities = 96/211 (45%), Positives = 122/211 (57%), Gaps = 11/211 (5%)
 Frame = -3

Query: 1025 LASTAPFS-------PSPRAQLHLPXXXXXXXSWKRHKNPDFLPMSPSELPIFCENPYLS 867
            +AST PFS        S   + H P           +KN  FL  +PS   +   NP LS
Sbjct: 1    MASTTPFSIQHPTWTTSKTLKFHEP-----------YKNLHFLS-NPSSHSL--SNPSLS 46

Query: 866  SYSFPHTLKLPSLRNSAPLLTPPLSDSADDNYVESHQ--NLSNLQLIPN--GFSSNLTKT 699
            S SFP   KL  L  + PLL  PL DS+ D  +E  +   ++N Q +     F   +   
Sbjct: 47   SSSFPLNPKLSIL--NPPLLFHPLHDSSHDRLLEDFEIPTINNHQKLETLIKFDQIVHGE 104

Query: 698  SSKRVFIQDPPWVSSLFMKNLLFRSRNKSGVKIEYQEMERRKYYLLRRRQIKVETEAWEN 519
            SSKRVFI+D PW+S+L+ K    +  NK  VK+E +++E+RKY LLRRRQI+ ETEAWE 
Sbjct: 105  SSKRVFIRDSPWISALYWKGT-HKIANKK-VKLELKDIEKRKYNLLRRRQIREETEAWER 162

Query: 518  MVEEYKELEREMCEKKLAPNLPYVKKLILGW 426
            M EEY  L +EMCE+KLAPNLPYVK L LGW
Sbjct: 163  MAEEYTGLVKEMCERKLAPNLPYVKSLFLGW 193


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
           gi|557556792|gb|ESR66806.1| hypothetical protein
           CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score =  181 bits (460), Expect(2) = 2e-75
 Identities = 90/145 (62%), Positives = 116/145 (80%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWF PL  AIE+EQK  RTKK K A+AP I+ LPADKMAVIVMHK+MGL+M  G +D
Sbjct: 219 LFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVM-AGHED 277

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKSLI 76
           RCV+VV+AA+ IG+AIE E+RIHSFLEK++  +R+ I+ +++ + SKE  LLRKRV SLI
Sbjct: 278 RCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEEVLSKEKELLRKRVNSLI 337

Query: 75  RRNKVLEVQKLVRNEEFKSWGRDTQ 1
           +  +V+E QKL++NEE K WGRDTQ
Sbjct: 338 KSKRVMEAQKLLKNEETKPWGRDTQ 362



 Score =  130 bits (326), Expect(2) = 2e-75
 Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 27/183 (14%)
 Frame = -3

Query: 887 CENPYLSSYSFPHTLKLPSLRNSAPLLTPPLSDSADDNYVES------------------ 762
           C +   SS SFP  LK  S + +  L   PL DS   N++E+                  
Sbjct: 49  CSSSSSSSSSFPVNLKSSSSKPTR-LRPRPLQDSIQSNFMENIENSVDFHIPTCEQEQNF 107

Query: 761 HQNLSNLQ-----LIPNGFSSN----LTKTSSKRVFIQDPPWVSSLFMKNLLFRSRNKSG 609
           HQ + N++     +IP   +S     +     +R+F+QDPPW SS+F+K L  R + +  
Sbjct: 108 HQRVENIETCADPVIPRSENSTNHQLMCLEPRRRIFVQDPPWFSSIFLKGLYKRIKLQ-- 165

Query: 608 VKIEYQEMERRKYYLLRRRQIKVETEAWENMVEEYKELEREMCEKKLAPNLPYVKKLILG 429
              EY+EM++RK+ LLRRRQ+K ETEAWE MV+EYKELE +M EK+LAPNLP++K L LG
Sbjct: 166 ---EYREMKKRKFNLLRRRQVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLG 222

Query: 428 WGG 420
           W G
Sbjct: 223 WFG 225


>ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
           gi|557556793|gb|ESR66807.1| hypothetical protein
           CICLE_v10007333mg [Citrus clementina]
          Length = 986

 Score =  181 bits (460), Expect(2) = 2e-75
 Identities = 90/145 (62%), Positives = 116/145 (80%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWF PL  AIE+EQK  RTKK K A+AP I+ LPADKMAVIVMHK+MGL+M  G +D
Sbjct: 219 LFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVM-AGHED 277

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKSLI 76
           RCV+VV+AA+ IG+AIE E+RIHSFLEK++  +R+ I+ +++ + SKE  LLRKRV SLI
Sbjct: 278 RCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEEVLSKEKELLRKRVNSLI 337

Query: 75  RRNKVLEVQKLVRNEEFKSWGRDTQ 1
           +  +V+E QKL++NEE K WGRDTQ
Sbjct: 338 KSKRVMEAQKLLKNEETKPWGRDTQ 362



 Score =  130 bits (326), Expect(2) = 2e-75
 Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 27/183 (14%)
 Frame = -3

Query: 887 CENPYLSSYSFPHTLKLPSLRNSAPLLTPPLSDSADDNYVES------------------ 762
           C +   SS SFP  LK  S + +  L   PL DS   N++E+                  
Sbjct: 49  CSSSSSSSSSFPVNLKSSSSKPTR-LRPRPLQDSIQSNFMENIENSVDFHIPTCEQEQNF 107

Query: 761 HQNLSNLQ-----LIPNGFSSN----LTKTSSKRVFIQDPPWVSSLFMKNLLFRSRNKSG 609
           HQ + N++     +IP   +S     +     +R+F+QDPPW SS+F+K L  R + +  
Sbjct: 108 HQRVENIETCADPVIPRSENSTNHQLMCLEPRRRIFVQDPPWFSSIFLKGLYKRIKLQ-- 165

Query: 608 VKIEYQEMERRKYYLLRRRQIKVETEAWENMVEEYKELEREMCEKKLAPNLPYVKKLILG 429
              EY+EM++RK+ LLRRRQ+K ETEAWE MV+EYKELE +M EK+LAPNLP++K L LG
Sbjct: 166 ---EYREMKKRKFNLLRRRQVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLG 222

Query: 428 WGG 420
           W G
Sbjct: 223 WFG 225


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Citrus sinensis]
          Length = 1009

 Score =  182 bits (462), Expect(2) = 4e-75
 Identities = 90/145 (62%), Positives = 117/145 (80%)
 Frame = -2

Query: 435 LGVGWFEPLRAAIEKEQKSLRTKKHKTAFAPFIDALPADKMAVIVMHKIMGLLMMGGKDD 256
           L +GWF PLR AIE+EQK  RTKK K A+AP I+ LPADK+AVIVMHK+MGL+M  G +D
Sbjct: 216 LFLGWFGPLREAIEREQKMQRTKKQKAAYAPHIELLPADKVAVIVMHKMMGLVM-AGHED 274

Query: 255 RCVRVVEAAIQIGVAIEHEVRIHSFLEKSRKCQRRDIVDESQGISSKEALLLRKRVKSLI 76
           RCV+VV+AA+ IG+AIE E+RIHSFLEK++  +R+ I+ +++ + SKE  LLRKRV SLI
Sbjct: 275 RCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEEVLSKEKELLRKRVNSLI 334

Query: 75  RRNKVLEVQKLVRNEEFKSWGRDTQ 1
           +  +V+E QKL++NEE K WGRDTQ
Sbjct: 335 KSKRVMEAQKLLKNEETKPWGRDTQ 359



 Score =  128 bits (322), Expect(2) = 4e-75
 Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 27/177 (15%)
 Frame = -3

Query: 869 SSYSFPHTLKLPSLRNSAPLLTPPLSDSADDNYVES------------------HQNLSN 744
           SS SFP  LK  S   S P    PL DS   N++E+                  HQ + N
Sbjct: 54  SSSSFPVNLKSSS---SNPTRLRPLQDSIQSNFMENIENSVDFHIPTCEQEQIFHQRVEN 110

Query: 743 LQ-----LIPNGFSSN----LTKTSSKRVFIQDPPWVSSLFMKNLLFRSRNKSGVKIEYQ 591
            +     +IP   +S     +     +R+F+QDPPW SS+F+K L  R + +     EY+
Sbjct: 111 TETCADLVIPRSENSTNHQLMCLEPRRRIFVQDPPWFSSIFLKGLYKRIKLQ-----EYR 165

Query: 590 EMERRKYYLLRRRQIKVETEAWENMVEEYKELEREMCEKKLAPNLPYVKKLILGWGG 420
           EM++RK+ LLRRRQ+K ETEAWE MV+EYKELE +M EK+LAPNLP++K L LGW G
Sbjct: 166 EMKKRKFNLLRRRQVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFG 222