BLASTX nr result

ID: Forsythia23_contig00039123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00039123
         (845 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK08102.1| predicted protein [Hordeum vulgare subsp. vulgare]     67   1e-08
dbj|BAK01790.1| predicted protein, partial [Hordeum vulgare subs...    67   1e-08
gb|KHG05001.1| Bromodomain adjacent to zinc finger domain 1A [Go...    63   2e-07
ref|XP_012438868.1| PREDICTED: uncharacterized protein LOC105764...    63   3e-07
ref|XP_012438866.1| PREDICTED: uncharacterized protein LOC105764...    63   3e-07
gb|KJB51042.1| hypothetical protein B456_008G198600 [Gossypium r...    63   3e-07
ref|XP_012438867.1| PREDICTED: uncharacterized protein LOC105764...    63   3e-07
dbj|BAK05573.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-06

>dbj|BAK08102.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 511

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 31/66 (46%), Positives = 40/66 (60%)
 Frame = -1

Query: 218 GLRFPLHPFLQSVLIKHNLAPGQIVPNGWRMLVYFLLVCLKNDISPSVKLCRLVFEMKRS 39
           G+RFPLH F    L    LAPGQ+ P+GWR+LV F+ +C   D+ PSV L R  F ++  
Sbjct: 84  GVRFPLHAFFCDTLSHFGLAPGQLTPDGWRVLVGFVALCRDADVPPSVALFRHFFSLRSR 143

Query: 38  VGLKCF 21
            G  CF
Sbjct: 144 SGWYCF 149


>dbj|BAK01790.1| predicted protein, partial [Hordeum vulgare subsp. vulgare]
          Length = 529

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 31/66 (46%), Positives = 40/66 (60%)
 Frame = -1

Query: 218 GLRFPLHPFLQSVLIKHNLAPGQIVPNGWRMLVYFLLVCLKNDISPSVKLCRLVFEMKRS 39
           G+RFPLH F    L    LAPGQ+ P+GWR+LV F+ +C   D+ PSV L R  F ++  
Sbjct: 102 GVRFPLHAFFCDTLSHFGLAPGQLTPDGWRVLVGFVALCRDADVPPSVALFRHFFSLRSR 161

Query: 38  VGLKCF 21
            G  CF
Sbjct: 162 SGWYCF 167


>gb|KHG05001.1| Bromodomain adjacent to zinc finger domain 1A [Gossypium arboreum]
          Length = 884

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 27/65 (41%), Positives = 40/65 (61%)
 Frame = -1

Query: 227 FRRGLRFPLHPFLQSVLIKHNLAPGQIVPNGWRMLVYFLLVCLKNDISPSVKLCRLVFEM 48
           F+ GLR PLHP +  +L + ++AP QI PN WR+L+ F+  C    I+P+V L R +  +
Sbjct: 345 FKAGLRLPLHPLISEILSEFSVAPTQIPPNSWRVLICFISFCYSQKITPTVNLFRAICSL 404

Query: 47  KRSVG 33
           K   G
Sbjct: 405 KDHSG 409


>ref|XP_012438868.1| PREDICTED: uncharacterized protein LOC105764710 isoform X3
           [Gossypium raimondii]
          Length = 780

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 26/65 (40%), Positives = 40/65 (61%)
 Frame = -1

Query: 227 FRRGLRFPLHPFLQSVLIKHNLAPGQIVPNGWRMLVYFLLVCLKNDISPSVKLCRLVFEM 48
           F+ GLR PLHP +  +L + ++AP QI PN WR+L+ F+  C    ++P+V L R +  +
Sbjct: 241 FKAGLRLPLHPLISEILSEFSVAPTQIPPNSWRVLICFISFCYSQKVTPTVNLFRAICSL 300

Query: 47  KRSVG 33
           K   G
Sbjct: 301 KDHSG 305


>ref|XP_012438866.1| PREDICTED: uncharacterized protein LOC105764710 isoform X1
           [Gossypium raimondii]
          Length = 867

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 26/65 (40%), Positives = 40/65 (61%)
 Frame = -1

Query: 227 FRRGLRFPLHPFLQSVLIKHNLAPGQIVPNGWRMLVYFLLVCLKNDISPSVKLCRLVFEM 48
           F+ GLR PLHP +  +L + ++AP QI PN WR+L+ F+  C    ++P+V L R +  +
Sbjct: 328 FKAGLRLPLHPLISEILSEFSVAPTQIPPNSWRVLICFISFCYSQKVTPTVNLFRAICSL 387

Query: 47  KRSVG 33
           K   G
Sbjct: 388 KDHSG 392


>gb|KJB51042.1| hypothetical protein B456_008G198600 [Gossypium raimondii]
          Length = 814

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 26/65 (40%), Positives = 40/65 (61%)
 Frame = -1

Query: 227 FRRGLRFPLHPFLQSVLIKHNLAPGQIVPNGWRMLVYFLLVCLKNDISPSVKLCRLVFEM 48
           F+ GLR PLHP +  +L + ++AP QI PN WR+L+ F+  C    ++P+V L R +  +
Sbjct: 275 FKAGLRLPLHPLISEILSEFSVAPTQIPPNSWRVLICFISFCYSQKVTPTVNLFRAICSL 334

Query: 47  KRSVG 33
           K   G
Sbjct: 335 KDHSG 339


>ref|XP_012438867.1| PREDICTED: uncharacterized protein LOC105764710 isoform X2
           [Gossypium raimondii] gi|763783970|gb|KJB51041.1|
           hypothetical protein B456_008G198600 [Gossypium
           raimondii] gi|763783972|gb|KJB51043.1| hypothetical
           protein B456_008G198600 [Gossypium raimondii]
          Length = 846

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 26/65 (40%), Positives = 40/65 (61%)
 Frame = -1

Query: 227 FRRGLRFPLHPFLQSVLIKHNLAPGQIVPNGWRMLVYFLLVCLKNDISPSVKLCRLVFEM 48
           F+ GLR PLHP +  +L + ++AP QI PN WR+L+ F+  C    ++P+V L R +  +
Sbjct: 307 FKAGLRLPLHPLISEILSEFSVAPTQIPPNSWRVLICFISFCYSQKVTPTVNLFRAICSL 366

Query: 47  KRSVG 33
           K   G
Sbjct: 367 KDHSG 371


>dbj|BAK05573.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 447

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = -1

Query: 218 GLRFPLHPFLQSVLIKHNLAPGQIVPNGWRMLVYFLLVCLKNDISPSVKLCRLVFEM 48
           G+RFPLH F +  L    LAPGQ+ PNGW +LV F+++C +  + PS+ L R  F +
Sbjct: 91  GVRFPLHAFFRKALTHFRLAPGQLTPNGWLVLVGFVVLCHEAGVRPSMTLFRHFFSL 147


Top