BLASTX nr result

ID: Forsythia23_contig00038818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00038818
         (304 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB73912.1| polyprotein [Citrus sinensis]                           67   6e-09
gb|AFB73911.1| polyprotein [Citrus sinensis]                           67   6e-09
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                              58   2e-06
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               57   5e-06
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               57   5e-06
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                   56   8e-06

>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = -1

Query: 130 MGTKFEIEKFNRNNFSL*KMKMKAILTKKDCLKAIGERPAEIT 2
           M  K+EIEKFN NNFSL KMKMKA+L K +CL AIGERP EIT
Sbjct: 1   MAAKYEIEKFNGNNFSLWKMKMKAVLRKNNCLAAIGERPMEIT 43


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = -1

Query: 130 MGTKFEIEKFNRNNFSL*KMKMKAILTKKDCLKAIGERPAEIT 2
           M  K+EIEKFN NNFSL KMKMKA+L K +CL AIGERP EIT
Sbjct: 1   MAAKYEIEKFNGNNFSLWKMKMKAVLRKNNCLAAIGERPMEIT 43


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/43 (65%), Positives = 32/43 (74%)
 Frame = -1

Query: 130 MGTKFEIEKFNRNNFSL*KMKMKAILTKKDCLKAIGERPAEIT 2
           M  KFEIEKFN  NFSL K+K+KAIL K +CL AI ERP + T
Sbjct: 1   MAAKFEIEKFNGKNFSLWKLKVKAILRKDNCLAAISERPVDFT 43


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = -1

Query: 130 MGTKFEIEKFNRNNFSL*KMKMKAILTKKDCLKAIGERPAEIT 2
           M  KFEIEKFN  NFSL K+K++AIL K +CL AI  RPA+IT
Sbjct: 1   MAAKFEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRPADIT 43


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = -1

Query: 130 MGTKFEIEKFNRNNFSL*KMKMKAILTKKDCLKAIGERPAEIT 2
           M  KFEIEKFN  NFSL K+K++AIL K +CL AI  RPA+IT
Sbjct: 1   MAAKFEIEKFNGRNFSLWKLKIRAILRKDNCLDAIDGRPADIT 43


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = -1

Query: 130 MGTKFEIEKFNRNNFSL*KMKMKAILTKKDCLKAIGERPAEIT 2
           M  KFEI KFN +NFSL K+K+KAIL K +CL AI  RPA+IT
Sbjct: 1   MAAKFEIPKFNGSNFSLWKLKIKAILRKDNCLPAIDGRPADIT 43


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