BLASTX nr result
ID: Forsythia23_contig00038757
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00038757
(425 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 130 4e-39
dbj|BAA22288.1| polyprotein [Oryza australiensis] 129 5e-39
gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-... 128 2e-38
gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subc... 129 7e-38
gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group] 129 7e-38
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 127 9e-38
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 126 3e-37
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 124 2e-36
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 121 2e-36
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 121 2e-36
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group] 126 4e-36
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 129 5e-36
gb|ABA97706.1| retrotransposon protein, putative, Ty1-copia subc... 120 1e-35
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 118 2e-35
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 118 5e-33
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 128 6e-33
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 128 7e-32
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 128 7e-32
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 110 2e-31
ref|XP_008365627.1| PREDICTED: uncharacterized protein LOC103429... 115 9e-31
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 130 bits (328), Expect(2) = 4e-39
Identities = 64/82 (78%), Positives = 71/82 (86%), Gaps = 1/82 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAMLCT PDVSYALS TSR+Q++PGE HWIAVKNILK+L +TKDMFLVYG
Sbjct: 827 PYASAIGSIMYAMLCTHPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYG 886
Query: 245 G-NELRVQGYDDVSFQSDKDMF 183
G EL V+GY D SFQ+DKD F
Sbjct: 887 GQEELVVKGYTDASFQTDKDDF 908
Score = 57.4 bits (137), Expect(2) = 4e-39
Identities = 29/52 (55%), Positives = 33/52 (63%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
SG+VF NGGAVSW EYIAASEAAK VWIKKF+++LG
Sbjct: 912 SGFVFCLNGGAVSWKSSKQDTVVDSITEAEYIAASEAAKEAVWIKKFVSQLG 963
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 129 bits (324), Expect(2) = 5e-39
Identities = 66/95 (69%), Positives = 75/95 (78%), Gaps = 1/95 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAMLCTRPDVSYALS TSR+Q++PGE HW AVKNILK+L +TKDMFLVYG
Sbjct: 1093 PYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYG 1152
Query: 245 GNE-LRVQGYDDVSFQSDKDMFFVYATKDMFWICI 144
G E L V GY D SFQ+DKD Y ++ F C+
Sbjct: 1153 GEEDLVVSGYTDASFQTDKD---DYRSQSGFVFCL 1184
Score = 58.5 bits (140), Expect(2) = 5e-39
Identities = 30/52 (57%), Positives = 33/52 (63%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
SG+VF NGGAVSW EYIAASEAAK VWIKKF++ELG
Sbjct: 1178 SGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSELG 1229
>gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77550175|gb|ABA92972.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 305
Score = 128 bits (322), Expect(2) = 2e-38
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAMLCTRPDVSYALS TSR+Q++PGE HWIAVKNILK+L +TKDMFLVYG
Sbjct: 76 PYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGETHWIAVKNILKYLIRTKDMFLVYG 135
Query: 245 G-NELRVQGYDDVSFQSDKDMF 183
G EL V Y D SFQ+DKD F
Sbjct: 136 GQEELVVNDYTDASFQTDKDDF 157
Score = 57.4 bits (137), Expect(2) = 2e-38
Identities = 29/52 (55%), Positives = 33/52 (63%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
SG+VF NGGAVSW EYIAASEAAK VWIKKF+++LG
Sbjct: 161 SGFVFCLNGGAVSWKSSKQDTLANSTTKTEYIAASEAAKEAVWIKKFVSQLG 212
>gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 767
Score = 129 bits (325), Expect(2) = 7e-38
Identities = 64/82 (78%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIG IMYAMLCTRPDVSYALS TSR+Q +PGE HWIAVKNILK+L +TKDMFLVYG
Sbjct: 567 PYASAIGCIMYAMLCTRPDVSYALSATSRYQLDPGESHWIAVKNILKYLRRTKDMFLVYG 626
Query: 245 G-NELRVQGYDDVSFQSDKDMF 183
G EL V GY D SFQ+DKD F
Sbjct: 627 GQEELVVNGYTDASFQTDKDDF 648
Score = 54.3 bits (129), Expect(2) = 7e-38
Identities = 28/52 (53%), Positives = 32/52 (61%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
S +VF NGGAVSW EYIAASEAAK VWIKKF+++LG
Sbjct: 652 SKFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKKAVWIKKFVSQLG 703
>gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 657
Score = 129 bits (325), Expect(2) = 7e-38
Identities = 64/82 (78%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIG IMYAMLCTRPDVSYALS TSR+Q +PGE HWIAVKNILK+L +TKDMFLVYG
Sbjct: 457 PYASAIGCIMYAMLCTRPDVSYALSATSRYQLDPGESHWIAVKNILKYLRRTKDMFLVYG 516
Query: 245 G-NELRVQGYDDVSFQSDKDMF 183
G EL V GY D SFQ+DKD F
Sbjct: 517 GQEELVVNGYTDASFQTDKDDF 538
Score = 54.3 bits (129), Expect(2) = 7e-38
Identities = 28/52 (53%), Positives = 32/52 (61%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
S +VF NGGAVSW EYIAASEAAK VWIKKF+++LG
Sbjct: 542 SKFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKKAVWIKKFVSQLG 593
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 127 bits (318), Expect(2) = 9e-38
Identities = 62/80 (77%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAM+CTRPDVSYALSVTSR+QA+P E HW AVKNILK+L +TKD+FLVYG
Sbjct: 673 PYASAIGSIMYAMICTRPDVSYALSVTSRYQADPSEGHWTAVKNILKYLRRTKDVFLVYG 732
Query: 245 GN-ELRVQGYDDVSFQSDKD 189
G+ EL V GY D SFQ+DKD
Sbjct: 733 GDEELVVNGYTDASFQTDKD 752
Score = 56.6 bits (135), Expect(2) = 9e-38
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
SG+VF NGGAVSW EYIAASEAAK VWI+ FITELG
Sbjct: 758 SGFVFILNGGAVSWKSSKQETVADSTTEAEYIAASEAAKEGVWIRNFITELG 809
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 126 bits (316), Expect(2) = 3e-37
Identities = 61/82 (74%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAMLCTRPDV YALS TS++Q++PGE HWIAVKNILK+L +TKDMFL+YG
Sbjct: 717 PYASAIGSIMYAMLCTRPDVPYALSATSQYQSDPGESHWIAVKNILKYLRRTKDMFLIYG 776
Query: 245 G-NELRVQGYDDVSFQSDKDMF 183
G EL V Y D SFQ+DKD F
Sbjct: 777 GQEELVVNNYTDASFQTDKDDF 798
Score = 55.8 bits (133), Expect(2) = 3e-37
Identities = 28/52 (53%), Positives = 32/52 (61%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
SG+VF NGGAVSW EYIAASEAAK WIKKF+++LG
Sbjct: 802 SGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAAWIKKFVSQLG 853
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 124 bits (312), Expect(2) = 2e-36
Identities = 61/80 (76%), Positives = 69/80 (86%), Gaps = 1/80 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAM+CTR DVSYALSVTSR+QA+PGE HW AVKNILK+L +TKD FL+YG
Sbjct: 1089 PYASAIGSIMYAMICTRQDVSYALSVTSRYQADPGECHWTAVKNILKYLRRTKDAFLIYG 1148
Query: 245 GN-ELRVQGYDDVSFQSDKD 189
G+ EL V GY D SFQ+DKD
Sbjct: 1149 GDEELVVNGYTDASFQTDKD 1168
Score = 54.7 bits (130), Expect(2) = 2e-36
Identities = 29/52 (55%), Positives = 31/52 (59%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
SG+VF NGGAVSW EYIAASEAAK VWI+ FI ELG
Sbjct: 1174 SGFVFILNGGAVSWKSSKQETVADSTTKAEYIAASEAAKEGVWIRNFIAELG 1225
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 121 bits (304), Expect(2) = 2e-36
Identities = 62/82 (75%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAMLCTR DVSYALS TSR+Q++ GE HWIAVKNILK+L +TKDMFLVYG
Sbjct: 1042 PYASAIGSIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYG 1101
Query: 245 -GNELRVQGYDDVSFQSDKDMF 183
EL V GY D SFQ+DKD F
Sbjct: 1102 RQEELVVNGYTDASFQTDKDDF 1123
Score = 57.4 bits (137), Expect(2) = 2e-36
Identities = 29/52 (55%), Positives = 33/52 (63%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
SG+VF NGGAVSW EYIAASEAAK VWIKKF+++LG
Sbjct: 1127 SGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLG 1178
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 121 bits (304), Expect(2) = 2e-36
Identities = 62/82 (75%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAMLCTR DVSYALS TSR+Q++ GE HWIAVKNILK+L +TKDMFLVYG
Sbjct: 955 PYASAIGSIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYG 1014
Query: 245 -GNELRVQGYDDVSFQSDKDMF 183
EL V GY D SFQ+DKD F
Sbjct: 1015 RQEELVVNGYTDASFQTDKDDF 1036
Score = 57.4 bits (137), Expect(2) = 2e-36
Identities = 29/52 (55%), Positives = 33/52 (63%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
SG+VF NGGAVSW EYIAASEAAK VWIKKF+++LG
Sbjct: 1040 SGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLG 1091
>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
Length = 948
Score = 126 bits (317), Expect(2) = 4e-36
Identities = 62/82 (75%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAMLCT PDVSYALS T+R+Q++PGE HWIAVKNILK+L +T+DMFLVYG
Sbjct: 815 PYASAIGSIMYAMLCTCPDVSYALSATNRYQSDPGESHWIAVKNILKYLRRTEDMFLVYG 874
Query: 245 G-NELRVQGYDDVSFQSDKDMF 183
G EL V GY D SFQ+DKD F
Sbjct: 875 GQEELVVNGYTDASFQTDKDDF 896
Score = 51.6 bits (122), Expect(2) = 4e-36
Identities = 26/49 (53%), Positives = 30/49 (61%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFIT 11
SG+VF NGG VSW EYIAASEAAK+ VWIKKF++
Sbjct: 900 SGFVFCLNGGVVSWKSSKQDTVADSTTEAEYIAASEAAKDAVWIKKFVS 948
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 129 bits (325), Expect(2) = 5e-36
Identities = 64/82 (78%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAMLCTRPDVSYALS TSR+Q++PGE HWIAVKNILK+L +TKDMFL YG
Sbjct: 964 PYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLAYG 1023
Query: 245 G-NELRVQGYDDVSFQSDKDMF 183
G EL V GY D SFQ DKD F
Sbjct: 1024 GQEELVVNGYTDASFQIDKDDF 1045
Score = 48.1 bits (113), Expect(2) = 5e-36
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
SG+VF NGGAVSW EYIAASEA VWIKKF+++LG
Sbjct: 1049 SGFVFCLNGGAVSWKSSKQDIVVDSTTEAEYIAASEA----VWIKKFVSQLG 1096
>gb|ABA97706.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 206
Score = 120 bits (301), Expect(2) = 1e-35
Identities = 59/80 (73%), Positives = 69/80 (86%), Gaps = 1/80 (1%)
Frame = -1
Query: 419 ALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYGGN 240
A AIGSI+YAMLCTRPDVSYALS T+R+Q++ GE HWIA+KNILK+L +TKDMFLVYGG+
Sbjct: 10 ASAIGSIIYAMLCTRPDVSYALSATNRYQSDLGESHWIAIKNILKYLRRTKDMFLVYGGH 69
Query: 239 -ELRVQGYDDVSFQSDKDMF 183
EL V GY D SFQ+DKD F
Sbjct: 70 EELVVNGYTDTSFQNDKDDF 89
Score = 56.2 bits (134), Expect(2) = 1e-35
Identities = 28/52 (53%), Positives = 33/52 (63%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
SG++F NGGAVSW EYIAASEAAK VWIKKF+++LG
Sbjct: 93 SGFLFCLNGGAVSWKSSKQDIAADSTTEAEYIAASEAAKEAVWIKKFVSQLG 144
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 118 bits (296), Expect(2) = 2e-35
Identities = 60/95 (63%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAML TRPDV+ ALS+TSR+Q++PGE HWI V+NI K+L +TKD FLVYG
Sbjct: 740 PYASAIGSIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYG 799
Query: 245 GN-ELRVQGYDDVSFQSDKDMFFVYATKDMFWICI 144
G+ EL V GY D SFQ+DKD F ++ F+ C+
Sbjct: 800 GSEELVVSGYTDASFQTDKDDF---RSQSGFFFCL 831
Score = 57.4 bits (137), Expect(2) = 2e-35
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
SG+ F NGGAVSW EYIAASEAAK VWI+KFITELG
Sbjct: 825 SGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELG 876
>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 118 bits (295), Expect(2) = 5e-33
Identities = 55/80 (68%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA A+GSIMYAM CTRPDV++ALS+ SR+Q NPG HWIAVKNILK+L +TK+M LV G
Sbjct: 1076 PYASAVGSIMYAMTCTRPDVAFALSMVSRYQGNPGRAHWIAVKNILKYLRRTKNMVLVLG 1135
Query: 245 GNE-LRVQGYDDVSFQSDKD 189
G++ LRV+GY D SFQ+D+D
Sbjct: 1136 GSDTLRVEGYTDASFQTDRD 1155
Score = 49.7 bits (117), Expect(2) = 5e-33
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITELG 2
SG+VF NGGAV+W EYIAASEA+K W+K FI +LG
Sbjct: 1161 SGWVFLLNGGAVTWKSSKQETVADSTCESEYIAASEASKEAAWLKNFIGDLG 1212
>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77550379|gb|ABA93176.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 938
Score = 128 bits (322), Expect(2) = 6e-33
Identities = 63/82 (76%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAMLCTRPDVSYALS TS++Q++PGE HWIA+KNILK+L +TKDMFLVYG
Sbjct: 812 PYASAIGSIMYAMLCTRPDVSYALSATSQYQSDPGESHWIALKNILKYLRRTKDMFLVYG 871
Query: 245 G-NELRVQGYDDVSFQSDKDMF 183
G EL V GY D SFQ DKD F
Sbjct: 872 GQEELVVNGYTDASFQIDKDDF 893
Score = 38.9 bits (89), Expect(2) = 6e-33
Identities = 22/42 (52%), Positives = 23/42 (54%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTV 32
SG+VF NGGAVSW EYIAASEAAK V
Sbjct: 897 SGFVFYLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEVV 938
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 128 bits (322), Expect(2) = 7e-32
Identities = 63/82 (76%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAMLCTRPDVSY LS TSR+Q++P E HWIAVKNILK+L +TKDMFLVYG
Sbjct: 1016 PYASAIGSIMYAMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYG 1075
Query: 245 G-NELRVQGYDDVSFQSDKDMF 183
G EL V GY D SFQ+DKD F
Sbjct: 1076 GQEELVVNGYTDASFQTDKDDF 1097
Score = 35.4 bits (80), Expect(2) = 7e-32
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTV 32
SG+VF NG AVSW EYIAAS+AAK V
Sbjct: 1101 SGFVFCLNGSAVSWKSSKQDTAANSTTEAEYIAASKAAKEAV 1142
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 128 bits (322), Expect(2) = 7e-32
Identities = 63/82 (76%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGSIMYAMLCTRPDVSY LS TSR+Q++P E HWIAVKNILK+L +TKDMFLVYG
Sbjct: 958 PYASAIGSIMYAMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYG 1017
Query: 245 G-NELRVQGYDDVSFQSDKDMF 183
G EL V GY D SFQ+DKD F
Sbjct: 1018 GQEELVVNGYTDASFQTDKDDF 1039
Score = 35.4 bits (80), Expect(2) = 7e-32
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTV 32
SG+VF NG AVSW EYIAAS+AAK V
Sbjct: 1043 SGFVFCLNGSAVSWKSSKQDTAANSTTEAEYIAASKAAKEAV 1084
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 110 bits (275), Expect(2) = 2e-31
Identities = 47/79 (59%), Positives = 62/79 (78%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PY+ A+GS+MYAMLCTRPD+ Y++ + SR+Q+NPG HW AVKNILK+L +T++ LVYG
Sbjct: 1103 PYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYG 1162
Query: 245 GNELRVQGYDDVSFQSDKD 189
+L + GY D FQSDKD
Sbjct: 1163 AKDLILTGYTDSDFQSDKD 1181
Score = 52.0 bits (123), Expect(2) = 2e-31
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = -2
Query: 166 KTCSGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKKFITEL 5
K+ SG VFT NGGAV W EY+AA EAAK VW++KF+T+L
Sbjct: 1184 KSTSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDL 1237
>ref|XP_008365627.1| PREDICTED: uncharacterized protein LOC103429259 [Malus domestica]
Length = 281
Score = 115 bits (287), Expect(2) = 9e-31
Identities = 53/80 (66%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
Frame = -1
Query: 425 PYALAIGSIMYAMLCTRPDVSYALSVTSRFQANPGEKHWIAVKNILKFLGKTKDMFLVYG 246
PYA AIGS+MYAM+CTR D++YA+S+TSR+Q+NPG +HW AVK +LK+L +TKDMFLVYG
Sbjct: 5 PYASAIGSLMYAMICTRXDIAYAVSITSRYQSNPGXEHWAAVKTVLKYLRRTKDMFLVYG 64
Query: 245 G-NELRVQGYDDVSFQSDKD 189
G EL V+ Y D FQSD D
Sbjct: 65 GAAELLVEAYTDADFQSDID 84
Score = 45.1 bits (105), Expect(2) = 9e-31
Identities = 24/46 (52%), Positives = 28/46 (60%)
Frame = -2
Query: 157 SGYVFTQNGGAVSWXXXXXXXXXXXXXXXEYIAASEAAKNTVWIKK 20
SGYVFT NGGAVSW EY+AA++A K W+KK
Sbjct: 90 SGYVFTLNGGAVSWKSKKQSVIADSTTXXEYVAAAKAGKEAFWMKK 135