BLASTX nr result
ID: Forsythia23_contig00038468
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00038468
(496 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 232 8e-59
emb|CAA31653.1| polyprotein [Arabidopsis thaliana] 225 8e-57
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 224 2e-56
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 224 2e-56
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 222 9e-56
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 221 1e-55
ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 219 6e-55
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 219 7e-55
emb|CAA20201.1| putative transposable element [Arabidopsis thali... 218 1e-54
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 218 2e-54
dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabido... 217 3e-54
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop... 217 3e-54
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal... 216 5e-54
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot... 214 1e-53
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 212 7e-53
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 211 1e-52
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 210 3e-52
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 209 6e-52
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 209 6e-52
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 209 7e-52
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 232 bits (591), Expect = 8e-59
Identities = 104/162 (64%), Positives = 132/162 (81%)
Frame = -3
Query: 488 PTHGGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLE 309
P+ G RYF+SL+DD+SRKVWI++L+ KD+A + F+ W +LVENQ + K+K LRTDNGLE
Sbjct: 496 PSLSGGRYFMSLIDDYSRKVWIYILKIKDQALEKFKVWKSLVENQSDFKLKCLRTDNGLE 555
Query: 308 FCNMEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAA 129
FC+ F+ YC++ GI+RH+TVR TPQQNG+AER+NRT++DK RCMLI+S L + FW EA
Sbjct: 556 FCSKVFEEYCQKHGIKRHKTVRFTPQQNGLAERMNRTLVDKTRCMLINSKLPRSFWAEAV 615
Query: 128 CTAVYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
TA YL+NRSPSSAI FKTPEELW+GKP N + RVFGC AY
Sbjct: 616 NTASYLVNRSPSSAIGFKTPEELWNGKPANYQNLRVFGCPAY 657
>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
Length = 1291
Score = 225 bits (574), Expect = 8e-57
Identities = 104/162 (64%), Positives = 123/162 (75%)
Frame = -3
Query: 488 PTHGGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLE 309
P+ GN+YFLS++DD +RKVW++ LR+KDE F W LVENQ+ KVK LRTDNGLE
Sbjct: 521 PSLSGNKYFLSIIDDKTRKVWLYFLRSKDETFDRFCEWKELVENQQNKKVKCLRTDNGLE 580
Query: 308 FCNMEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAA 129
FCN++FD YCKE GI+RH+T +TPQQNGVAER+NRTIM+KVRCML SGL + FW EAA
Sbjct: 581 FCNLKFDAYCKEHGIERHKTCTYTPQQNGVAERMNRTIMEKVRCMLNESGLGEEFWAEAA 640
Query: 128 CTAVYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
TA YLINRSP+SAI+ PEELW K P H R FG AY
Sbjct: 641 ATAAYLINRSPASAIDHNVPEELWLNKKPGYKHLRRFGSIAY 682
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 224 bits (571), Expect = 2e-56
Identities = 98/161 (60%), Positives = 126/161 (78%)
Frame = -3
Query: 485 THGGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLEF 306
+H G RY+++ +DD SRKVW++ L+ KDE F+ W T+VE + VKTLRTDNGLEF
Sbjct: 606 SHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEF 665
Query: 305 CNMEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAAC 126
CN +FD +C++ GI RHRTVRHTPQQNGVAER+N+T++ + RCM I +GLSK FW EA
Sbjct: 666 CNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVN 725
Query: 125 TAVYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
TA YL+NRSPS+AI+FKTP+E+WSGKP N S ++FGC AY
Sbjct: 726 TAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAY 766
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 224 bits (571), Expect = 2e-56
Identities = 98/161 (60%), Positives = 126/161 (78%)
Frame = -3
Query: 485 THGGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLEF 306
+H G RY+++ +DD SRKVW++ L+ KDE F+ W T+VE + VKTLRTDNGLEF
Sbjct: 819 SHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEF 878
Query: 305 CNMEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAAC 126
CN +FD +C++ GI RHRTVRHTPQQNGVAER+N+T++ + RCM I +GLSK FW EA
Sbjct: 879 CNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVN 938
Query: 125 TAVYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
TA YL+NRSPS+AI+FKTP+E+WSGKP N S ++FGC AY
Sbjct: 939 TAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAY 979
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 222 bits (565), Expect = 9e-56
Identities = 105/159 (66%), Positives = 123/159 (77%)
Frame = -3
Query: 479 GGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLEFCN 300
G ++YF+S VDD+SRKVWI+ LR KDEA + F W +VENQ + KVK LRTDNGLE+CN
Sbjct: 491 GNSQYFISFVDDYSRKVWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCN 550
Query: 299 MEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAACTA 120
F+ +CKE GI RH+T +TPQQNG+AERLNRTIMDKVR ML SG+ K FW EAA TA
Sbjct: 551 HYFEKFCKEEGIVRHKTCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTA 610
Query: 119 VYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
VYLINRSPS+AINF PEE W+G P+LS R FGC AY
Sbjct: 611 VYLINRSPSTAINFDLPEEKWTGALPDLSSLRKFGCLAY 649
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 221 bits (564), Expect = 1e-55
Identities = 103/162 (63%), Positives = 128/162 (79%)
Frame = -3
Query: 488 PTHGGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLE 309
P+ GG RYFL+L+DD+SRKVWI+ L+ K E F+ W LVE Q KVK LRTDNGLE
Sbjct: 464 PSIGGARYFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLE 523
Query: 308 FCNMEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAA 129
F + +F++ C++ GI RHRTVR+TPQQNG+AER+NRTI+++VRCML SSGLSK FW EAA
Sbjct: 524 FLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVFWAEAA 583
Query: 128 CTAVYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
TAV+LINRSPSSA+ FKTP+E W+GK + H +VFGC AY
Sbjct: 584 ETAVHLINRSPSSALQFKTPQEKWTGKAADYQHLKVFGCTAY 625
>ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC103833265 [Brassica rapa]
Length = 3353
Score = 219 bits (558), Expect = 6e-55
Identities = 99/159 (62%), Positives = 121/159 (76%)
Frame = -3
Query: 479 GGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLEFCN 300
GG +YF+S +DD S+KVW++ L+TKDEA F+ W VE+ E K+K LRTDNGLEFCN
Sbjct: 428 GGCKYFISFIDDFSKKVWVYFLQTKDEAFSKFKEWKEAVESHTEKKIKCLRTDNGLEFCN 487
Query: 299 MEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAACTA 120
FD C+ GI+RHRT +TPQQNGV+ER+NRTIMDKVR ML +GL + FW EA TA
Sbjct: 488 NRFDELCRTSGIKRHRTCNYTPQQNGVSERMNRTIMDKVRSMLAETGLGQEFWAEATSTA 547
Query: 119 VYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
VYLINR+P+S I+FK PEE+WSG P+LSH R FGC AY
Sbjct: 548 VYLINRTPNSTIDFKLPEEVWSGNRPDLSHLRRFGCTAY 586
Score = 219 bits (558), Expect = 6e-55
Identities = 99/159 (62%), Positives = 121/159 (76%)
Frame = -3
Query: 479 GGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLEFCN 300
GG +YF+S +DD S+KVW++ L+TKDEA F+ W VE+ E K+K LRTDNGLEFCN
Sbjct: 2503 GGCKYFISFIDDFSKKVWVYFLQTKDEAFSKFKEWKEAVESHTEKKIKCLRTDNGLEFCN 2562
Query: 299 MEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAACTA 120
FD C+ GI+RHRT +TPQQNGV+ER+NRTIMDKVR ML +GL + FW EA TA
Sbjct: 2563 NRFDELCRTSGIKRHRTCNYTPQQNGVSERMNRTIMDKVRSMLAETGLGQEFWAEATSTA 2622
Query: 119 VYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
VYLINR+P+S I+FK PEE+WSG P+LSH R FGC AY
Sbjct: 2623 VYLINRTPNSTIDFKLPEEVWSGNRPDLSHLRRFGCTAY 2661
Score = 85.1 bits (209), Expect = 2e-14
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 11/104 (10%)
Frame = -3
Query: 281 CKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVR-----------CMLISSGLSKGFWGE 135
C+E+G+Q H Q+ +A NR ++ + + + L + FW E
Sbjct: 1182 CEELGLQTGSVKMHCDSQSALALAKNRVFHERTKHVANKYHFIRDIVAQETCLLQEFWAE 1241
Query: 134 AACTAVYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
A TAVYLINR+P+S I+FK PEE+WSG P+LSH R FGC AY
Sbjct: 1242 ATSTAVYLINRTPNSTIDFKLPEEVWSGNRPDLSHLRRFGCTAY 1285
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 219 bits (557), Expect = 7e-55
Identities = 100/162 (61%), Positives = 121/162 (74%)
Frame = -3
Query: 488 PTHGGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLE 309
P+ G +YFLS++DD +RKVW++ L++KDE F W +LVENQ KVK LRTDNGLE
Sbjct: 511 PSISGKQYFLSIIDDKTRKVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLE 570
Query: 308 FCNMEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAA 129
FCN FD+YCKE GI+RHRT +TPQQNGVAER+NRTIM+KVRC+L SG+ + FW EAA
Sbjct: 571 FCNSRFDSYCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAA 630
Query: 128 CTAVYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
TA YLINRSP+SAIN PEE+W + P H R FG AY
Sbjct: 631 ATAAYLINRSPASAINHNVPEEMWLNRKPGYKHLRKFGSIAY 672
>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
gi|7268932|emb|CAB79135.1| putative transposable element
[Arabidopsis thaliana]
Length = 1308
Score = 218 bits (555), Expect = 1e-54
Identities = 99/163 (60%), Positives = 121/163 (74%)
Frame = -3
Query: 491 HPTHGGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGL 312
H G +YFLS++DD SRKVW+ L+TKDE + F W LVENQ KVK LRTDNGL
Sbjct: 501 HADLWGKQYFLSIIDDKSRKVWLMFLKTKDETFERFCEWKELVENQVNKKVKILRTDNGL 560
Query: 311 EFCNMEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEA 132
EFCN++FD +CK+ GI+RHRT +TPQQNGVA+R+NRT+M+KVRC+L SGL + FW EA
Sbjct: 561 EFCNLKFDEFCKQNGIERHRTCTYTPQQNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEA 620
Query: 131 ACTAVYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
A TA YL+NRSP+SA++ PEELW K P H R FGC AY
Sbjct: 621 AATAAYLVNRSPASAVDHNVPEELWLDKKPGYKHLRRFGCIAY 663
>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Erythranthe guttatus]
Length = 598
Score = 218 bits (554), Expect = 2e-54
Identities = 99/162 (61%), Positives = 126/162 (77%)
Frame = -3
Query: 488 PTHGGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLE 309
PT+GGNRYFLS++DD+SRKV++FLL+ K + F+ W TL+ENQ ++KTLRTDNG+E
Sbjct: 220 PTYGGNRYFLSIIDDYSRKVFVFLLKQKSDVFDKFKTWKTLIENQTGKRIKTLRTDNGIE 279
Query: 308 FCNMEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAA 129
FCN+EFD C GI+RH++V HTPQQNGVAER+NRT++++VR ML SSGL K FWGEA
Sbjct: 280 FCNLEFDNLCANSGIRRHKSVVHTPQQNGVAERMNRTLLERVRSMLTSSGLPKLFWGEAI 339
Query: 128 CTAVYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
TA YLINRSPS +N PE +W GK +LS+ VFG AA+
Sbjct: 340 LTATYLINRSPSMPLNGDLPESVWCGKKVDLSNLHVFGYAAF 381
>dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1140
Score = 217 bits (552), Expect = 3e-54
Identities = 97/162 (59%), Positives = 119/162 (73%)
Frame = -3
Query: 488 PTHGGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLE 309
P+ G +YFLS++DD +RKVW+ L+TKDE F W LVENQ K+K LRTDNGLE
Sbjct: 488 PSLSGKQYFLSIIDDKTRKVWLMFLKTKDETFDKFCEWKELVENQVNKKIKVLRTDNGLE 547
Query: 308 FCNMEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAA 129
FCN++FD YCK+ GI+RHRT +TPQQNGVAER+NRT+M+KVRC+L SGL + FW EAA
Sbjct: 548 FCNLKFDEYCKKNGIERHRTCTYTPQQNGVAERMNRTLMEKVRCLLNESGLDESFWAEAA 607
Query: 128 CTAVYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
T YL+NRSP+S ++ PEELW GK P H R FG AY
Sbjct: 608 STTAYLVNRSPASVVDHNVPEELWLGKKPGYKHLRRFGSIAY 649
>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1166
Score = 217 bits (552), Expect = 3e-54
Identities = 103/167 (61%), Positives = 125/167 (74%), Gaps = 3/167 (1%)
Frame = -3
Query: 494 KHPTH---GGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRT 324
KH T GG RYF+S +DD S+KVW++ L+TKDEA FR W VENQ K+K LRT
Sbjct: 390 KHTTKESLGGCRYFVSFIDDFSKKVWVYFLKTKDEAYHKFREWKQAVENQTGKKIKYLRT 449
Query: 323 DNGLEFCNMEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGF 144
DNGLEF N +FD CKE GI+RHRT +TPQQNGV+ER+N+TIMD VR ML +G+S+ F
Sbjct: 450 DNGLEFYNTQFDNLCKEDGIKRHRTCTYTPQQNGVSERMNKTIMDIVRSMLAETGMSQEF 509
Query: 143 WGEAACTAVYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
W EA TAVYLINR+P+S I FK PEE+W+G P+LSH R FGC+AY
Sbjct: 510 WAEATSTAVYLINRTPNSFIGFKLPEEVWTGTKPDLSHLRRFGCSAY 556
>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
Length = 855
Score = 216 bits (550), Expect = 5e-54
Identities = 97/162 (59%), Positives = 122/162 (75%)
Frame = -3
Query: 488 PTHGGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLE 309
P+ GN+YFLS++DD SRKVW++ LR+KDE F W LVENQ + +VK LRTDNGLE
Sbjct: 194 PSMSGNKYFLSIIDDKSRKVWLYFLRSKDETFDKFCEWKELVENQTDKRVKCLRTDNGLE 253
Query: 308 FCNMEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAA 129
FCN++FD+YCK+ GI+RH+T +TPQQNGVAER+NRT+M+KVRC+L SGL + FW E A
Sbjct: 254 FCNIKFDSYCKKYGIERHKTCTYTPQQNGVAERMNRTVMEKVRCLLNESGLEEEFWAEVA 313
Query: 128 CTAVYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
TAVY+INRSPS+AI+ PEELW + P H R AY
Sbjct: 314 TTAVYIINRSPSAAIDHNVPEELWLNRKPGYKHLRRLRAVAY 355
>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
(strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
unnamed protein product [Arabidopsis thaliana]
Length = 1084
Score = 214 bits (546), Expect = 1e-53
Identities = 100/162 (61%), Positives = 121/162 (74%)
Frame = -3
Query: 488 PTHGGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLE 309
P+ GN+YFLS++DD +RKVW++ LR+KDE F LVENQ+ KVK LRTDNGLE
Sbjct: 421 PSLSGNKYFLSIIDDKTRKVWLYFLRSKDETFDRFCERKELVENQQNKKVKCLRTDNGLE 480
Query: 308 FCNMEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAA 129
FCN++FD YCK+ GI+RH T +TPQQNGVA+R+NRTIM+KVRCML SGL + FW EAA
Sbjct: 481 FCNLKFDAYCKDHGIERHMTCTYTPQQNGVADRMNRTIMEKVRCMLNESGLGEEFWAEAA 540
Query: 128 CTAVYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
TA YLI+RSP+SAI+ PEELW K P H R FG AY
Sbjct: 541 ATAAYLISRSPASAIDHNVPEELWLNKKPGYKHLRRFGSIAY 582
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 212 bits (540), Expect = 7e-53
Identities = 96/159 (60%), Positives = 123/159 (77%)
Frame = -3
Query: 479 GGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLEFCN 300
G +YF+S++DD +RKVW++ ++TKDEA + F WV LVENQ + +VKTLRTDNGLEFCN
Sbjct: 515 GKCQYFMSIIDDFTRKVWVYFMKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCN 574
Query: 299 MEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAACTA 120
FD +C+ +GI RHRT +TPQQNGVAER+NRTIM+KVR ML SGL K FW EA T
Sbjct: 575 KLFDGFCESIGIHRHRTCAYTPQQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTT 634
Query: 119 VYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
V LIN++PSSA+NF+ P++ WSG PP S+ R +GC A+
Sbjct: 635 VLLINKTPSSALNFEIPDKKWSGNPPVYSYLRRYGCVAF 673
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 211 bits (538), Expect = 1e-52
Identities = 96/159 (60%), Positives = 122/159 (76%)
Frame = -3
Query: 479 GGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLEFCN 300
G +YF+S +DD++RKVW++ L+TKDEA + F +W++LVENQ +VKTLRTDNGLEFCN
Sbjct: 522 GNCQYFISFIDDYTRKVWVYFLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCN 581
Query: 299 MEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAACTA 120
FD +C+E G QRHRT +TPQQNGV ER+NRTIM+KVR ML SGL K FW EA TA
Sbjct: 582 RMFDGFCEEKGFQRHRTCAYTPQQNGVVERMNRTIMEKVRSMLCDSGLPKRFWAEATHTA 641
Query: 119 VYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
V LIN++P SAINF+ P++ WSGK P S+ R +GC +
Sbjct: 642 VLLINKTPCSAINFEFPDKRWSGKAPIYSYLRRYGCVTF 680
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 210 bits (534), Expect = 3e-52
Identities = 98/159 (61%), Positives = 119/159 (74%)
Frame = -3
Query: 479 GGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLEFCN 300
GG RY +++VDD+SRKVW + L+ K EA F+ W T+VE Q E KVK LRTDNG+EFC+
Sbjct: 448 GGARYMMTIVDDYSRKVWPYFLKHKFEAFLVFKEWKTMVERQTERKVKVLRTDNGMEFCS 507
Query: 299 MEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAACTA 120
+F +YC+ GI RH TV HTPQQNGV ER+NRTI+ K RCML ++GL + FW EAA TA
Sbjct: 508 RQFKSYCRSEGIVRHYTVSHTPQQNGVVERMNRTIISKARCMLSNAGLPRRFWAEAASTA 567
Query: 119 VYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
YLINRSPS AI+ KTP E+WSG P N S +VFGC AY
Sbjct: 568 CYLINRSPSYAIDKKTPIEMWSGSPANYSDLKVFGCTAY 606
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 209 bits (532), Expect = 6e-52
Identities = 99/159 (62%), Positives = 118/159 (74%)
Frame = -3
Query: 479 GGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLEFCN 300
GG RY +++VDD+SRKVW + L+ K +A F+ W T+VE Q E KVK LRTDNG+EFC+
Sbjct: 716 GGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCS 775
Query: 299 MEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAACTA 120
F +YCK GI RH TV HTPQQNGVAER+NRTI+ K RC+L ++GL K FW EA TA
Sbjct: 776 KIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTA 835
Query: 119 VYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
YLINRSPS AI+ KTP E+WSG P N S RVFGC AY
Sbjct: 836 CYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAY 874
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 209 bits (532), Expect = 6e-52
Identities = 99/159 (62%), Positives = 118/159 (74%)
Frame = -3
Query: 479 GGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLEFCN 300
GG RY +++VDD+SRKVW + L+ K +A F+ W T+VE Q E KVK LRTDNG+EFC+
Sbjct: 509 GGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCS 568
Query: 299 MEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAACTA 120
F +YCK GI RH TV HTPQQNGVAER+NRTI+ K RC+L ++GL K FW EA TA
Sbjct: 569 KIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTA 628
Query: 119 VYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
YLINRSPS AI+ KTP E+WSG P N S RVFGC AY
Sbjct: 629 CYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAY 667
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 209 bits (531), Expect = 7e-52
Identities = 99/159 (62%), Positives = 118/159 (74%)
Frame = -3
Query: 479 GGNRYFLSLVDDHSRKVWIFLLRTKDEACKNFRNWVTLVENQKETKVKTLRTDNGLEFCN 300
GG RY +++VDD+SRKVW + L+ K +A F+ W T+VE Q E KVK LRTDNG+EFC+
Sbjct: 475 GGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCS 534
Query: 299 MEFDTYCKEMGIQRHRTVRHTPQQNGVAERLNRTIMDKVRCMLISSGLSKGFWGEAACTA 120
F +YCK GI RH T+ HTPQQNGVAER+NRTI+ K RCML ++GL K FW EA TA
Sbjct: 535 KIFKSYCKSEGIVRHYTIPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTA 594
Query: 119 VYLINRSPSSAINFKTPEELWSGKPPNLSHFRVFGCAAY 3
YLINRSPS AI+ KTP E+WSG P N S RVFGC AY
Sbjct: 595 CYLINRSPSYAIDKKTPIEVWSGSPVNYSDLRVFGCTAY 633