BLASTX nr result

ID: Forsythia23_contig00038391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00038391
         (482 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009800134.1| PREDICTED: pentatricopeptide repeat-containi...    56   8e-06
ref|XP_009595574.1| PREDICTED: pentatricopeptide repeat-containi...    56   8e-06

>ref|XP_009800134.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900
           [Nicotiana sylvestris]
          Length = 587

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
 Frame = +3

Query: 174 MELMMSARQTHESFWSFHHPXXXXXXXXXXXXFCCSN--FVSEKRKIDLS--RKRRRNRV 341
           MEL++  +QTHE F SFH              + C+N  F S   K+ +   RK+R+++V
Sbjct: 1   MELIVPTKQTHEGFCSFH---STRKEITSKRLWGCNNRRFRSSSIKVLVGQLRKQRQSKV 57

Query: 342 LAVSKTETYCTNGRLKLSNMEKNPQGQGXXXXXXXXXXXXXYLRRLV 482
            A+S++ET  TNGR  LS +EK P  QG             YLRRLV
Sbjct: 58  FAISRSETLGTNGR--LSCVEKRPHVQGSISENFEEFESNNYLRRLV 102


>ref|XP_009595574.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900
           [Nicotiana tomentosiformis]
          Length = 587

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
 Frame = +3

Query: 174 MELMMSARQTHESFWSFHHPXXXXXXXXXXXXFCCSN--FVSEKRKIDLS--RKRRRNRV 341
           MEL++  +QTHE F SFH                C+N  F S   K+ +   RK+R+++V
Sbjct: 1   MELIVPTKQTHEGFCSFHSTRKEITSKRLSG---CNNRRFRSSSIKVLVGQLRKQRQSKV 57

Query: 342 LAVSKTETYCTNGRLKLSNMEKNPQGQGXXXXXXXXXXXXXYLRRLV 482
            A+S++ET  TNGR  LS +EK P  QG             YLRRLV
Sbjct: 58  FAISRSETLGTNGR--LSCVEKRPHVQGSISENFEEFESNNYLRRLV 102


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