BLASTX nr result

ID: Forsythia23_contig00037499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00037499
         (458 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006666139.1| cytochrome c oxidase subunit II (mitochondri...    67   5e-09
ref|XP_009343093.1| PREDICTED: cytochrome c oxidase subunit 2 [P...    62   2e-07

>ref|YP_006666139.1| cytochrome c oxidase subunit II (mitochondrion) [Malus domestica]
           gi|401661942|emb|CBX33403.1| cox2 (mitochondrion) [Malus
           domestica]
          Length = 306

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 33/46 (71%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
 Frame = -3

Query: 129 IGPT*PAISDFLNWESKS---LFFWGGAEQ*KNEPKQMIVLEWLFL 1
           +G   PA S FLNWESK+    FFWGGAEQ KNEP QMIVLEWLFL
Sbjct: 10  VGKAQPATSVFLNWESKNKSLFFFWGGAEQLKNEPTQMIVLEWLFL 55


>ref|XP_009343093.1| PREDICTED: cytochrome c oxidase subunit 2 [Pyrus x bretschneideri]
          Length = 306

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 32/46 (69%), Positives = 34/46 (73%), Gaps = 3/46 (6%)
 Frame = -3

Query: 129 IGPT*PAISDFLNWESKS---LFFWGGAEQ*KNEPKQMIVLEWLFL 1
           +G   PA S FLNWESK+    FF GGAEQ KNEP QMIVLEWLFL
Sbjct: 10  VGKAQPATSVFLNWESKNKSLFFFLGGAEQLKNEPTQMIVLEWLFL 55


Top