BLASTX nr result
ID: Forsythia23_contig00037428
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00037428
(670 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBY05833.1| Ribulose 1,5-bisphosphate carboxylase small subu... 284 3e-74
emb|CAD11990.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 278 2e-72
emb|CDP20139.1| unnamed protein product [Coffea canephora] 271 2e-70
sp|P04715.1|RBS2_PETHY RecName: Full=Ribulose bisphosphate carbo... 265 2e-68
sp|P32764.1|RBS3_SOLTU RecName: Full=Ribulose bisphosphate carbo... 265 2e-68
gb|AAO25119.1| ribulose-1,5-bisphosphate carboxylase small subun... 264 3e-68
sp|Q39746.1|RBS4_FLAPR RecName: Full=Ribulose bisphosphate carbo... 264 4e-68
gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 263 8e-68
gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 263 8e-68
sp|P04714.1|RBS1_PETHY RecName: Full=Ribulose bisphosphate carbo... 262 1e-67
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 262 1e-67
sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carbox... 262 1e-67
ref|XP_009800809.1| PREDICTED: ribulose bisphosphate carboxylase... 261 2e-67
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai... 261 2e-67
sp|Q39744.1|RBS2_FLAPR RecName: Full=Ribulose bisphosphate carbo... 261 2e-67
sp|P26573.1|RBS8_NICPL RecName: Full=Ribulose bisphosphate carbo... 261 2e-67
ref|XP_012487760.1| PREDICTED: ribulose bisphosphate carboxylase... 261 2e-67
dbj|BAR91105.1| ribulose 1,5-bisphosphate carboxylase/oxygenase ... 261 3e-67
ref|NP_001275244.1| ribulose bisphosphate carboxylase small chai... 261 3e-67
gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 261 3e-67
>emb|CBY05833.1| Ribulose 1,5-bisphosphate carboxylase small subunit precursor
[Coffea canephora] gi|336478343|emb|CBY89197.1| ribulose
1,5-bisphosphate carboxylase small subunit precursor
[Coffea canephora]
Length = 181
Score = 284 bits (727), Expect = 3e-74
Identities = 122/167 (73%), Positives = 147/167 (88%)
Frame = -3
Query: 605 TRSNPAQATMVAPFTGLKSTSAFPVTKKSADITTLSTNGGRVQCMQVWPPLGKYKYETLS 426
TR++PAQA+MVAPFTGLK+ S+FP++KKS DIT+L+TNGGRVQCMQVWPP GK K ET S
Sbjct: 15 TRASPAQASMVAPFTGLKAASSFPISKKSVDITSLATNGGRVQCMQVWPPTGKLKNETFS 74
Query: 425 YLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMFG 246
YLPDLT+ QL+K+++YL+RNGWIPC+EFELE G +R+YH SPGYYDGRYW MWKLPMFG
Sbjct: 75 YLPDLTDEQLLKEIDYLIRNGWIPCLEFELEKGHVYREYHRSPGYYDGRYWTMWKLPMFG 134
Query: 245 CTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
CTDATQV+KE++E KEYPNCW RIIGFD +RQVQC+SF +P G+
Sbjct: 135 CTDATQVLKEVRECLKEYPNCWVRIIGFDNVRQVQCISFIAAKPKGF 181
>emb|CAD11990.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Coffea arabica] gi|24940140|emb|CAD11991.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Coffea arabica]
Length = 181
Score = 278 bits (711), Expect = 2e-72
Identities = 118/167 (70%), Positives = 145/167 (86%)
Frame = -3
Query: 605 TRSNPAQATMVAPFTGLKSTSAFPVTKKSADITTLSTNGGRVQCMQVWPPLGKYKYETLS 426
TR++PAQA+MVAPF GLK+ S+FP++KKS DIT+L+TNGGRVQCMQVWPP G KYETLS
Sbjct: 15 TRASPAQASMVAPFNGLKAASSFPISKKSVDITSLATNGGRVQCMQVWPPRGLKKYETLS 74
Query: 425 YLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMFG 246
YLPDLT+ QL+K+++YL+R+GW+PC+EFELE G +R+YH SPGYYDGRYW MWKLPM+G
Sbjct: 75 YLPDLTDEQLLKEIDYLIRSGWVPCLEFELEKGFVYREYHRSPGYYDGRYWTMWKLPMYG 134
Query: 245 CTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
CTDATQV+ E+ E KEYPNCW RIIGFD +RQVQC+SF +P G+
Sbjct: 135 CTDATQVLNEVGECLKEYPNCWVRIIGFDNVRQVQCISFIAAKPKGF 181
>emb|CDP20139.1| unnamed protein product [Coffea canephora]
Length = 158
Score = 271 bits (694), Expect = 2e-70
Identities = 116/158 (73%), Positives = 138/158 (87%)
Frame = -3
Query: 578 MVAPFTGLKSTSAFPVTKKSADITTLSTNGGRVQCMQVWPPLGKYKYETLSYLPDLTEPQ 399
MVAPFTGLK+ S+FP++KKS DIT+L+TNGGRVQCMQVWPP GK K ET SYLPDLT+ Q
Sbjct: 1 MVAPFTGLKAASSFPISKKSVDITSLATNGGRVQCMQVWPPTGKLKNETFSYLPDLTDEQ 60
Query: 398 LIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMFGCTDATQVVK 219
L+K+++YL+RNGWIPC+EFELE G +R+YH SPGYYDGRYW MWKLPMFGCTDATQV+K
Sbjct: 61 LLKEIDYLIRNGWIPCLEFELEKGHVYREYHRSPGYYDGRYWTMWKLPMFGCTDATQVLK 120
Query: 218 EIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
E++E KEYPNCW RIIGFD +RQVQC+SF +P G+
Sbjct: 121 EVRECLKEYPNCWVRIIGFDNVRQVQCISFIAAKPKGF 158
>sp|P04715.1|RBS2_PETHY RecName: Full=Ribulose bisphosphate carboxylase small chain SSU11A,
chloroplastic; Short=RuBisCO small subunit SSU11A;
Flags: Precursor [Petunia x hybrida]
gi|68085|pir||RKPJS1 ribulose-bisphosphate carboxylase
(EC 4.1.1.39) small chain (ssu11A) precursor - garden
petunia gi|20493|emb|CAA27445.1| ribulose
1,5-bisphosphate carboxylase [Petunia x hybrida]
Length = 180
Score = 265 bits (677), Expect = 2e-68
Identities = 116/168 (69%), Positives = 143/168 (85%), Gaps = 1/168 (0%)
Frame = -3
Query: 605 TRSNPAQATMVAPFTGLKSTSAFPVTKK-SADITTLSTNGGRVQCMQVWPPLGKYKYETL 429
T +N AQA+MVAPFTGLKS ++FPV++K + DIT++++NGGRVQCMQVWPP GK KYETL
Sbjct: 13 TSTNAAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPYGKKKYETL 72
Query: 428 SYLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMF 249
SYLPDLT+ QL+K++EYLL GW+PC+EFE E+G +R+YHASP YYDGRYW MWKLPMF
Sbjct: 73 SYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMF 132
Query: 248 GCTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
GCTDATQV+ E++E +K YPN W RIIGFD +RQVQC+SF +P GY
Sbjct: 133 GCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPGY 180
>sp|P32764.1|RBS3_SOLTU RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
chloroplastic; Short=RuBisCO small subunit 3; Flags:
Precursor gi|21571|emb|CAA49417.1| ribulose bisphosphate
carboxylase [Solanum tuberosum]
Length = 181
Score = 265 bits (676), Expect = 2e-68
Identities = 117/169 (69%), Positives = 143/169 (84%), Gaps = 2/169 (1%)
Frame = -3
Query: 605 TRSNPAQATMVAPFTGLKSTSAFPVTKKS--ADITTLSTNGGRVQCMQVWPPLGKYKYET 432
TRSN AQA+MVAPFTGLKS ++FPVTKK+ DIT+L++NGGRV+CMQVWPP+ KYET
Sbjct: 13 TRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYET 72
Query: 431 LSYLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPM 252
LSYLPDL++ QL+K+VEYLL+NGW+PC+EFE E+G +R+ H SPGYYDGRYW MWKLPM
Sbjct: 73 LSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPM 132
Query: 251 FGCTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
FGCTDATQV+ E++E +K YP W RIIGFD +RQVQC+SF +P GY
Sbjct: 133 FGCTDATQVLAEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEGY 181
>gb|AAO25119.1| ribulose-1,5-bisphosphate carboxylase small subunit [Chrysanthemum
x morifolium]
Length = 179
Score = 264 bits (675), Expect = 3e-68
Identities = 118/166 (71%), Positives = 138/166 (83%)
Frame = -3
Query: 602 RSNPAQATMVAPFTGLKSTSAFPVTKKSADITTLSTNGGRVQCMQVWPPLGKYKYETLSY 423
R+ AQA+MVAPFTGLKS AFPVTKKS D ++L +NGGRVQCM+VWPPLG KYETLSY
Sbjct: 14 RTTSAQASMVAPFTGLKSNVAFPVTKKSNDFSSLPSNGGRVQCMKVWPPLGLKKYETLSY 73
Query: 422 LPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMFGC 243
LP LTE QL K+VEYLLRN W+PC+EFELE+G P+R+ + SPGYYDGRYW MWKLPMFGC
Sbjct: 74 LPPLTETQLAKEVEYLLRNKWVPCLEFELEHGFPYRENNRSPGYYDGRYWTMWKLPMFGC 133
Query: 242 TDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
DA+QV+KE+ E +KEYP W RIIGFD +RQVQC+SF +P GY
Sbjct: 134 NDASQVLKELNECKKEYPQSWVRIIGFDNVRQVQCISFIAHKPDGY 179
>sp|Q39746.1|RBS4_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
chloroplastic; Short=RuBisCO small subunit 4; Flags:
Precursor [Flaveria pringlei] gi|967225|gb|AAB67848.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 178
Score = 264 bits (674), Expect = 4e-68
Identities = 116/167 (69%), Positives = 140/167 (83%)
Frame = -3
Query: 605 TRSNPAQATMVAPFTGLKSTSAFPVTKKSADITTLSTNGGRVQCMQVWPPLGKYKYETLS 426
+R+ PAQA MVAPFTGLKS +AFP TKK+ D +TL +NGGRVQCM+VWPPLGK KYETLS
Sbjct: 12 SRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPSNGGRVQCMKVWPPLGKKKYETLS 71
Query: 425 YLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMFG 246
YLP+LTE QL K+V+YLLRN W+PC+EFELE+G +R+ SPGYYDGRYW MWKLPMFG
Sbjct: 72 YLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 131
Query: 245 CTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
CTD+ QV+KE++E +KEYP W RIIGFD +RQVQC+SF +P G+
Sbjct: 132 CTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDGF 178
>gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium tomentosum]
Length = 182
Score = 263 bits (671), Expect = 8e-68
Identities = 120/167 (71%), Positives = 142/167 (85%), Gaps = 1/167 (0%)
Frame = -3
Query: 602 RSNPAQATMVAPFTGLKSTSAFPVTKKSA-DITTLSTNGGRVQCMQVWPPLGKYKYETLS 426
RS+PAQA MVAPFTGLKS SAFPVT+K+ DIT+L++NGGRVQCMQVWPPLGK K+ETLS
Sbjct: 16 RSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLS 75
Query: 425 YLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMFG 246
YLPDLT QL K+V+YLLR+ WIPC+EFELE G HR+Y + P YYDGRYW MWKLPMFG
Sbjct: 76 YLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMFG 135
Query: 245 CTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
CTD+ QV+KE++E +KEYPN + RIIGFD +RQVQC+SF +P GY
Sbjct: 136 CTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPKGY 182
>gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366462|gb|AFS41728.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366476|gb|AFS41735.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium barbadense]
gi|406366492|gb|AFS41743.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium tomentosum] gi|406366506|gb|AFS41750.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium mustelinum]
gi|406366520|gb|AFS41757.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium darwinii]
Length = 182
Score = 263 bits (671), Expect = 8e-68
Identities = 120/167 (71%), Positives = 142/167 (85%), Gaps = 1/167 (0%)
Frame = -3
Query: 602 RSNPAQATMVAPFTGLKSTSAFPVTKKSA-DITTLSTNGGRVQCMQVWPPLGKYKYETLS 426
RS+PAQA MVAPFTGLKS SAFPVT+K+ DIT+L++NGGRVQCMQVWPPLGK K+ETLS
Sbjct: 16 RSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLS 75
Query: 425 YLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMFG 246
YLPDLT QL K+V+YLLR+ WIPC+EFELE G HR+Y + P YYDGRYW MWKLPMFG
Sbjct: 76 YLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMFG 135
Query: 245 CTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
CTD+ QV+KE++E +KEYPN + RIIGFD +RQVQC+SF +P GY
Sbjct: 136 CTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPEGY 182
>sp|P04714.1|RBS1_PETHY RecName: Full=Ribulose bisphosphate carboxylase small chain SSU8,
chloroplastic; Short=RuBisCO small subunit SSU8; Flags:
Precursor [Petunia x hybrida] gi|68086|pir||RKPJS8
ribulose-bisphosphate carboxylase (EC 4.1.1.39) small
chain (ssu8) precursor - garden petunia
gi|20491|emb|CAA27444.1| ribulose 1,5-bisphosphate
carboxylase [Petunia x hybrida]
Length = 180
Score = 262 bits (669), Expect = 1e-67
Identities = 115/168 (68%), Positives = 142/168 (84%), Gaps = 1/168 (0%)
Frame = -3
Query: 605 TRSNPAQATMVAPFTGLKSTSAFPVT-KKSADITTLSTNGGRVQCMQVWPPLGKYKYETL 429
TR+N AQA+MVAPF GLKS +FPV+ K++ DIT++++NGGRVQCMQVWPP GK KYETL
Sbjct: 13 TRTNVAQASMVAPFNGLKSAVSFPVSSKQNLDITSIASNGGRVQCMQVWPPYGKKKYETL 72
Query: 428 SYLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMF 249
SYLPDLT+ QL+K++EYLL GW+PC+EFE E+G +R+YHASP YYDGRYW MWKLPMF
Sbjct: 73 SYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMF 132
Query: 248 GCTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
GCTDATQV+ E++E +K YPN W RIIGFD +RQVQC+SF +P G+
Sbjct: 133 GCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPGF 180
>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Panax ginseng]
Length = 183
Score = 262 bits (669), Expect = 1e-67
Identities = 115/164 (70%), Positives = 144/164 (87%)
Frame = -3
Query: 605 TRSNPAQATMVAPFTGLKSTSAFPVTKKSADITTLSTNGGRVQCMQVWPPLGKYKYETLS 426
+R+ PAQA+MVAPFTGLKST+AFPVT+K DIT+L +NGGRVQCM+VWPPLG K+ETLS
Sbjct: 15 SRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLS 74
Query: 425 YLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMFG 246
YLP LT+ QL K+V+YLLR+GW+PC+EFELE+G +R++H SPGYYDGRYW MWKLPMFG
Sbjct: 75 YLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFG 134
Query: 245 CTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRP 114
CTD++QV+KE++E +KEYPN + RIIGFD +RQVQC+SF +P
Sbjct: 135 CTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178
>sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor [Hevea brasiliensis] gi|168217|gb|AAA33361.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Hevea brasiliensis]
Length = 183
Score = 262 bits (669), Expect = 1e-67
Identities = 117/166 (70%), Positives = 141/166 (84%), Gaps = 1/166 (0%)
Frame = -3
Query: 602 RSNPAQATMVAPFTGLKSTSAFPVTKKSA-DITTLSTNGGRVQCMQVWPPLGKYKYETLS 426
R++PAQA+MVAPFTGLKSTSAFP T+K+ DIT++++NGGRVQCMQVWPP GK YETLS
Sbjct: 16 RASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLS 75
Query: 425 YLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMFG 246
YLP LT QL K+VEYLLR GW+PC+EFELE+G +R+YH SPGYYDGRYW MWKLPMFG
Sbjct: 76 YLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFG 135
Query: 245 CTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTG 108
CTDA QV++E+ E+ K YP+C+ RIIGFD +RQVQC+SF +P G
Sbjct: 136 CTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKG 181
>ref|XP_009800809.1| PREDICTED: ribulose bisphosphate carboxylase small chain S41,
chloroplastic-like [Nicotiana sylvestris]
Length = 181
Score = 261 bits (668), Expect = 2e-67
Identities = 115/168 (68%), Positives = 143/168 (85%), Gaps = 1/168 (0%)
Frame = -3
Query: 605 TRSNPAQATMVAPFTGLKSTSAFPVTKK-SADITTLSTNGGRVQCMQVWPPLGKYKYETL 429
T +N AQA+MVAPFTGLKS S+FPVT+K + DIT++++NGGRVQCMQVWPP+ K KYETL
Sbjct: 14 TGANAAQASMVAPFTGLKSASSFPVTRKQNLDITSIASNGGRVQCMQVWPPINKKKYETL 73
Query: 428 SYLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMF 249
SYLPDL+E QL+++VEYLL+NGW+PC+EFE E+G +R+ + SPGYYDGRYW MWKLPMF
Sbjct: 74 SYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMF 133
Query: 248 GCTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
GCTDATQV+ E++E +K YP W RIIGFD +RQVQC+SF +P GY
Sbjct: 134 GCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEGY 181
>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
precursor, putative [Ricinus communis]
gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
carboxylase small chain 1B, chloroplast precursor,
putative [Ricinus communis]
Length = 181
Score = 261 bits (668), Expect = 2e-67
Identities = 118/168 (70%), Positives = 145/168 (86%), Gaps = 1/168 (0%)
Frame = -3
Query: 605 TRSNPAQATMVAPFTGLKSTSAFPVTKKSA-DITTLSTNGGRVQCMQVWPPLGKYKYETL 429
+RS+PAQATMVAPFTGLKS ++FPVT+K+ DIT++++NGGRVQCMQVWPPLGK K+ETL
Sbjct: 12 SRSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQVWPPLGKKKFETL 71
Query: 428 SYLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMF 249
SYLPDLT+ QL K+V+YLLR GWIPC+EFELE+G +R+ H SPGYYDGRYW MWKLPMF
Sbjct: 72 SYLPDLTDEQLAKEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMF 131
Query: 248 GCTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
GC+D+TQV+KE+ E +K YPN + RIIGFD RQVQC+SF +PT +
Sbjct: 132 GCSDSTQVLKELDEAKKAYPNSFIRIIGFDNRRQVQCISFIAYKPTTF 179
>sp|Q39744.1|RBS2_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor [Flaveria pringlei] gi|967221|gb|AAB67846.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 178
Score = 261 bits (668), Expect = 2e-67
Identities = 115/167 (68%), Positives = 139/167 (83%)
Frame = -3
Query: 605 TRSNPAQATMVAPFTGLKSTSAFPVTKKSADITTLSTNGGRVQCMQVWPPLGKYKYETLS 426
+R+ PAQA MVAPFTGLKS AFP TKK+ D +TL +NGGRVQCM+VWPPLGK +YETLS
Sbjct: 12 SRAAPAQANMVAPFTGLKSNVAFPATKKANDFSTLPSNGGRVQCMKVWPPLGKKRYETLS 71
Query: 425 YLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMFG 246
YLP+LTE QL K+V+YLLRN W+PC+EFELE+G +R+ SPGYYDGRYW MWKLPMFG
Sbjct: 72 YLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 131
Query: 245 CTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
CTD+ QV+KE++E +KEYP W RIIGFD +RQVQC+SF +P G+
Sbjct: 132 CTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPEGF 178
>sp|P26573.1|RBS8_NICPL RecName: Full=Ribulose bisphosphate carboxylase small chain 8B,
chloroplastic; Short=RuBisCO small subunit 8B; Flags:
Precursor [Nicotiana plumbaginifolia]
gi|19706|emb|CAA31994.1| ribulose bisphosphate
carboxylase [Nicotiana plumbaginifolia]
gi|170318|gb|AAA34110.1| ribulose bisphosphate
carboxylase [Nicotiana plumbaginifolia]
Length = 180
Score = 261 bits (668), Expect = 2e-67
Identities = 113/168 (67%), Positives = 142/168 (84%), Gaps = 1/168 (0%)
Frame = -3
Query: 605 TRSNPAQATMVAPFTGLKSTSAFPVTKK-SADITTLSTNGGRVQCMQVWPPLGKYKYETL 429
TRSN AQA MVAPFTGLKS ++FPV++K + DIT++++NGGRVQCMQVWPP+ K KYETL
Sbjct: 13 TRSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETL 72
Query: 428 SYLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMF 249
SYLPDL++ QL+ ++EYLL++GW+PC+EFE E G +R++H SPGYYDGRYW MWKLPMF
Sbjct: 73 SYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMF 132
Query: 248 GCTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
GCTDATQV+ E++E +K YP W RIIGFD +RQVQC+SF +P GY
Sbjct: 133 GCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEGY 180
>ref|XP_012487760.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic isoform X1 [Gossypium raimondii]
gi|406366454|gb|AFS41724.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium raimondii] gi|763742950|gb|KJB10449.1|
hypothetical protein B456_001G201800 [Gossypium
raimondii]
Length = 182
Score = 261 bits (668), Expect = 2e-67
Identities = 120/167 (71%), Positives = 141/167 (84%), Gaps = 1/167 (0%)
Frame = -3
Query: 602 RSNPAQATMVAPFTGLKSTSAFPVTKKSA-DITTLSTNGGRVQCMQVWPPLGKYKYETLS 426
RS+PAQA MVAPFTGLKS SAFPVT+K+ DIT+L++NGGRVQCMQVWPPLGK K+ETLS
Sbjct: 16 RSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLS 75
Query: 425 YLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMFG 246
YLPDLT QL K+V+YLLR+ WIPC+EFELE G HR+Y P YYDGRYW MWKLPMFG
Sbjct: 76 YLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSNLPTYYDGRYWTMWKLPMFG 135
Query: 245 CTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
CTD+ QV+KE++E +KEYPN + RIIGFD +RQVQC+SF +P GY
Sbjct: 136 CTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPEGY 182
>dbj|BAR91105.1| ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit
(rbcS) [Ipomoea batatas]
Length = 177
Score = 261 bits (666), Expect = 3e-67
Identities = 115/164 (70%), Positives = 135/164 (82%)
Frame = -3
Query: 605 TRSNPAQATMVAPFTGLKSTSAFPVTKKSADITTLSTNGGRVQCMQVWPPLGKYKYETLS 426
+R+ AQA+MVAPFTGLKST++FPVTKKSAD T++STNG RVQCMQVWPP GK K+ETLS
Sbjct: 13 SRATAAQASMVAPFTGLKSTASFPVTKKSADFTSISTNGSRVQCMQVWPPYGKMKFETLS 72
Query: 425 YLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMFG 246
YLP L+ QLIKQVEYLL NGW+PC+EFE E G +R+ H SPGYYDGRYW MWKLPMFG
Sbjct: 73 YLPPLSTEQLIKQVEYLLNNGWVPCLEFETEKGFVYRECHRSPGYYDGRYWTMWKLPMFG 132
Query: 245 CTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRP 114
CTDATQV+ E++E +K YP W RI+GFD +RQVQC+ F P
Sbjct: 133 CTDATQVIAEMQECKKAYPEAWVRILGFDNVRQVQCIMFLAAMP 176
>ref|NP_001275244.1| ribulose bisphosphate carboxylase small chain C, chloroplastic
[Solanum tuberosum] gi|132071|sp|P10647.1|RBS0_SOLTU
RecName: Full=Ribulose bisphosphate carboxylase small
chain C, chloroplastic; Short=RuBisCO small subunit C;
Flags: Precursor gi|169557|gb|AAA33838.1| ribulose
bisphosphate carboxylase (EC 4.1.1.39) [Solanum
tuberosum]
Length = 181
Score = 261 bits (666), Expect = 3e-67
Identities = 114/169 (67%), Positives = 143/169 (84%), Gaps = 2/169 (1%)
Frame = -3
Query: 605 TRSNPAQATMVAPFTGLKSTSAFPVTKKS--ADITTLSTNGGRVQCMQVWPPLGKYKYET 432
TRSN AQA+MVAPFTGLKS ++FPVTKK+ DIT+L++NGGRV+CMQVWPP+ KYET
Sbjct: 13 TRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYET 72
Query: 431 LSYLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPM 252
LSYLPDL++ QL+K+VEYLL+NGW+PC+EFE E+G +R++++SPGYYDGRYW MWKLPM
Sbjct: 73 LSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTMWKLPM 132
Query: 251 FGCTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
FGCTD TQV+ E++E + YP W RIIGFD +RQVQC+SF +P GY
Sbjct: 133 FGCTDGTQVLAEVQEAKNAYPQAWIRIIGFDNVRQVQCISFIAYKPEGY 181
>gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366478|gb|AFS41736.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366508|gb|AFS41751.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium mustelinum]
Length = 182
Score = 261 bits (666), Expect = 3e-67
Identities = 119/167 (71%), Positives = 141/167 (84%), Gaps = 1/167 (0%)
Frame = -3
Query: 602 RSNPAQATMVAPFTGLKSTSAFPVTKKSA-DITTLSTNGGRVQCMQVWPPLGKYKYETLS 426
RS+PAQA MVAPFTGLKS SAFPVT+K+ DIT+L++NGGRVQCMQVWPPLGK K+ETLS
Sbjct: 16 RSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLS 75
Query: 425 YLPDLTEPQLIKQVEYLLRNGWIPCIEFELENGLPHRQYHASPGYYDGRYWVMWKLPMFG 246
YLPDLT QL K+V+YLLR+ WIPC+EFELE G HR+Y + P YYDGRYW MWKLPMFG
Sbjct: 76 YLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMFG 135
Query: 245 CTDATQVVKEIKELEKEYPNCWARIIGFDKIRQVQCVSFTVKRPTGY 105
CTD+ QV+KE++ +KEYPN + RIIGFD +RQVQC+SF +P GY
Sbjct: 136 CTDSAQVLKELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPKGY 182