BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00037404
         (341 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               67   5e-09
ref|XP_008376990.1| PREDICTED: uncharacterized protein LOC103440...    60   4e-07
emb|CAN60203.1| hypothetical protein VITISV_036059 [Vitis vinifera]    60   6e-07
gb|KFL89552.1| hypothetical protein AmDm5_1575 [Acetobacter malo...    59   2e-06
ref|XP_008367623.1| PREDICTED: uncharacterized protein LOC103431...    59   2e-06
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...    59   2e-06
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...    58   2e-06
ref|XP_009623363.1| PREDICTED: uncharacterized protein LOC104114...    57   4e-06
emb|CAN74920.1| hypothetical protein VITISV_022026 [Vitis vinifera]    57   5e-06
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]    57   5e-06
gb|KHN45997.1| Retrovirus-related Pol polyprotein from transposo...    56   8e-06
gb|KHN30958.1| Retrovirus-related Pol polyprotein from transposo...    56   8e-06
gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposo...    56   8e-06
gb|KHN05629.1| Retrovirus-related Pol polyprotein from transposo...    56   8e-06

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
 Frame = -3

Query: 333 HKGYRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQKIPAV--GLDEFIHICSPIPVPADL 160
           H+GYRC DPS+GRVY+SR+VLF+E +FP+    +    ++    D+ I I  P+  P+  
Sbjct: 658 HQGYRCFDPSSGRVYLSRHVLFDESSFPFTEPALTSNSSIDSSTDQSILIFGPLSGPSPS 717

Query: 159 VPPSNSPQPANSIQH--SSDELTHPTEANNLPPYLRSR 52
           + PS SP P+  I         + P+ AN  PP    R
Sbjct: 718 LSPSPSPSPSPCISDPPRQSHPSSPSAANVAPPPAHER 755


>ref|XP_008376990.1| PREDICTED: uncharacterized protein LOC103440084 [Malus domestica]
          Length = 1106

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
 Frame = -3

Query: 333 HKGYRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQKI-------PAVGLDEFIHICSPIP 175
           HKG RCLDP T RVY+SR+VLF+E  FP+  L    +           ++  +++  PIP
Sbjct: 443 HKGXRCLDPLTQRVYISRHVLFDETTFPFHTLSSATVLPPXSFADTSQVNPCVNLQFPIP 502

Query: 174 VPADLVPPSNSPQPANSIQHSSDELTHPTEANNLPPYLRSR 52
            P+   P S+SP P          L +P+  ++  P L S+
Sbjct: 503 APSSPAPLSSSPAP----------LINPSSTHSXVPPLHSQ 533


>emb|CAN60203.1| hypothetical protein VITISV_036059 [Vitis vinifera]
          Length = 1412

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 18/107 (16%)
 Frame = -3

Query: 333 HKGYRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQK-IPAVG-----LDEFI-HICSPIP 175
           HKGY+C  PS+ + ++SR+V+ +E+ FPYKN Q Q  +P         D ++ HI SP  
Sbjct: 674 HKGYKCFHPSSKKFFISRHVVXDELFFPYKNTQNQSMVPPTSHVISIFDSWLPHINSPHS 733

Query: 174 VPAD---LVPPSNSPQP--------ANSIQHSSDELTHPTEANNLPP 67
           V  +   L PP  SP P        +NS+  SS   T   E   LPP
Sbjct: 734 VAIESQPLTPPCTSPLPTIPLLTSISNSVAGSSTNATSQXETAVLPP 780


>gb|KFL89552.1| hypothetical protein AmDm5_1575 [Acetobacter malorum]
          Length = 1375

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
 Frame = -3

Query: 333  HKGYRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQKIPAVGLDEFIHICSPIPVPADLVP 154
            +KGY C +P +GR YVSR+V+F E NFPYK+L V+             CSP+ V     P
Sbjct: 819  YKGYICFNPLSGRFYVSRHVVFYETNFPYKHLLVKPSQ----------CSPVFV----TP 864

Query: 153  PSNSP---------QPANSIQHSSDELTHPTEAN 79
            PS +P          P  S  H+S  L+ PT A+
Sbjct: 865  PSITPLVTGQNVVVSPHTSASHASLPLSQPTRAS 898


>ref|XP_008367623.1| PREDICTED: uncharacterized protein LOC103431265 [Malus domestica]
          Length = 1110

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
 Frame = -3

Query: 333  HKGYRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQKIPAVGLDEFIHICSPIPVPADLVP 154
            HKGYRCLDP+T RVY+SR+V+FNE +FP                F HI +  P P+ L P
Sbjct: 960  HKGYRCLDPATHRVYISRHVIFNESSFP----------------FHHISNIPPSPSSLPP 1003

Query: 153  PSNSPQPANSIQHSSDELTHP-TEANNLPP 67
             S S  P      S+   T P + ++++PP
Sbjct: 1004 RSPSSLP------STLTFTFPLSSSSSIPP 1027


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108706314|gb|ABF94109.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1247

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
 Frame = -3

Query: 339 PYHKGYRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQKIPAVGL---DEFIHICSPIPVP 169
           P HKG++CLDPSTGRVY+S +V+F+E  FP+ +L     P  G     E + + S + +P
Sbjct: 510 PLHKGFKCLDPSTGRVYISHDVIFDENVFPFASLH----PNAGAKLRSEILLLPSHLDIP 565

Query: 168 ADLVP--------PSNSP-QPANSIQHSSDELTHPTEANNLPP 67
             ++P         +N P  PAN I      L   + ANN  P
Sbjct: 566 --IIPGVQQMSTTVANVPTNPANQISGDELSLQENSAANNAAP 606


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1447

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
 Frame = -3

Query: 333 HKGYRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQKIPAVGLDEFI---HICSPIPVPAD 163
           HKG++CLDPSTGRVY+SR+V+F+E NFP+  L       +  +  +   H+ +P   P +
Sbjct: 714 HKGFKCLDPSTGRVYISRDVIFDETNFPFAKLHTNAGARLRSEILLLPSHLLNPTSNPGE 773

Query: 162 LVPPSNSP----QPANSIQHSSDELTHPTEANN 76
                N       PAN I  S+     P  A N
Sbjct: 774 QQLDDNMANIPVNPANQIFGSN---VQPVSAEN 803


>ref|XP_009623363.1| PREDICTED: uncharacterized protein LOC104114593 [Nicotiana
           tomentosiformis]
          Length = 717

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 39/107 (36%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
 Frame = -3

Query: 333 HKGYRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQKIPAVGLDEFIHICSPIPV----PA 166
           HKGYRCL   T RVY+SR+V F E  FPY NL     P   +    H+  PIP     P 
Sbjct: 593 HKGYRCLRLDTNRVYISRSVRFIEHCFPYANLSAFLPPRPSMP---HVLLPIPAALPSPT 649

Query: 165 DLVPPSNSP-----QPANSIQHSSDELTHPTEANNLPPYLRSRT*CP 40
              P S S       P++S++  S     P+   +L   L S   CP
Sbjct: 650 PTAPESTSSATTFMSPSSSVESPSLSSLPPSSLESLSLPLSSNDSCP 696


>emb|CAN74920.1| hypothetical protein VITISV_022026 [Vitis vinifera]
          Length = 620

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
 Frame = -3

Query: 333 HKGYRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQKIPA-VGLDEFIHICSPIPVPADLV 157
           HKGY CLD ST R+Y+SR+VLF+E +FP+     Q IPA + L +   + S +  P  L+
Sbjct: 480 HKGYICLDVSTSRLYISRDVLFHESSFPF-----QSIPAPLPLPQHTPLTSALINP-HLL 533

Query: 156 PPSNSPQPANSIQHSSDELTHPTEANNLPPYLR 58
             S+ P  +  +  SS + T  + +N+LPP L+
Sbjct: 534 STSSPPTVSFPVHTSSPDCT--STSNSLPPLLQ 564


>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
          Length = 1272

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 34/93 (36%), Positives = 52/93 (55%)
 Frame = -3

Query: 339 PYHKGYRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQKIPAVGLDEFIHICSPIPVPADL 160
           P HKGY CLD ST R+Y+SRNV+F+E +FP+++      P+  L        P   PA +
Sbjct: 711 PTHKGYLCLDVSTNRIYISRNVIFHESSFPFQSSSXPSSPSPHL--------PSSTPALI 762

Query: 159 VPPSNSPQPANSIQHSSDELTHPTEANNLPPYL 61
             PS S   + ++  SS  +T    +N++PP +
Sbjct: 763 NSPSLSAPSSPAV--SSPIIT----SNSIPPLI 789


>gb|KHN45997.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1235

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
 Frame = -3

Query: 324 YRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQKIPAVGLDE---FIHICSPIPVPADLVP 154
           Y CLDP+TGR+Y SR+V F E  FP+ +L     P+         + I  P+  P D  P
Sbjct: 624 YLCLDPTTGRIYTSRHVKFVESEFPFNSLVTHASPSPEQQTGPLQLSILQPMNPPEDSSP 683

Query: 153 PSNSPQPANS--IQHSSDELTHPTEA 82
             +SP   NS  +  SS E T+PT++
Sbjct: 684 APSSPSITNSPYMAQSSTEPTNPTQS 709


>gb|KHN30958.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1237

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
 Frame = -3

Query: 324 YRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQKIPAVGLDE---FIHICSPIPVPADLVP 154
           Y CLDP+TGR+Y SR+V F E  FP+ +L     P+         + I  P+  P D  P
Sbjct: 626 YLCLDPTTGRIYTSRHVKFVESEFPFNSLVTHASPSPEQQTGPLQLSILQPMNPPEDSSP 685

Query: 153 PSNSPQPANS--IQHSSDELTHPTEA 82
             +SP   NS  +  SS E T+PT++
Sbjct: 686 APSSPSITNSPYMAQSSTEPTNPTQS 711


>gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Glycine soja]
          Length = 1294

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
 Frame = -3

Query: 324 YRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQKIPAVGLDE---FIHICSPIPVPADLVP 154
           Y CLDP+TGR+Y SR+V F E  FP+ +L     P+         + I  P+  P D  P
Sbjct: 637 YLCLDPTTGRIYTSRHVKFVESEFPFNSLVTHASPSPEQQTGPLQLSILQPMNPPEDSSP 696

Query: 153 PSNSPQPANS--IQHSSDELTHPTEA 82
             +SP   NS  +  SS E T+PT++
Sbjct: 697 APSSPSITNSPYMAQSSTEPTNPTQS 722


>gb|KHN05629.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1248

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
 Frame = -3

Query: 324 YRCLDPSTGRVYVSRNVLFNEMNFPYKNLQVQKIPAVGLDE---FIHICSPIPVPADLVP 154
           Y CLDP+TGR+Y SR+V F E  FP+ +L     P+         + I  P+  P D  P
Sbjct: 626 YLCLDPTTGRIYTSRHVKFVESEFPFNSLVTHASPSPEQQTGPLQLSILQPMNPPEDSSP 685

Query: 153 PSNSPQPANS--IQHSSDELTHPTEA 82
             +SP   NS  +  SS E T+PT++
Sbjct: 686 APSSPSITNSPYMAQSSTEPTNPTQS 711