BLASTX nr result

ID: Forsythia23_contig00036407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00036407
         (412 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011097310.1| PREDICTED: 50S ribosomal protein L13, chloro...    58   3e-06
ref|XP_011009564.1| PREDICTED: 50S ribosomal protein L13, chloro...    57   5e-06
ref|XP_002323992.1| ribosomal protein L13 [Populus trichocarpa] ...    57   5e-06
ref|XP_010245183.1| PREDICTED: 50S ribosomal protein L13, chloro...    56   8e-06
ref|XP_010245181.1| PREDICTED: 50S ribosomal protein L13, chloro...    56   8e-06

>ref|XP_011097310.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Sesamum
           indicum]
          Length = 204

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 29/50 (58%), Positives = 33/50 (66%)
 Frame = -3

Query: 410 SEHPFGDRPIEPYEMXXXXXXXXXXXXXRAMIRAQKKAEQQEQGLSTYKR 261
           SEHPFGDRP+EPY M             RAMIRAQKKAEQQEQG +  ++
Sbjct: 142 SEHPFGDRPLEPYVMPARQVREMRPRARRAMIRAQKKAEQQEQGTTNTRK 191


>ref|XP_011009564.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Populus
           euphratica]
          Length = 205

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/44 (65%), Positives = 30/44 (68%)
 Frame = -3

Query: 410 SEHPFGDRPIEPYEMXXXXXXXXXXXXXRAMIRAQKKAEQQEQG 279
           SEHPFGDRP+EPY M             RAMIRAQKKAEQQEQG
Sbjct: 144 SEHPFGDRPLEPYVMPPRKVREIRPRARRAMIRAQKKAEQQEQG 187


>ref|XP_002323992.1| ribosomal protein L13 [Populus trichocarpa]
           gi|222866994|gb|EEF04125.1| ribosomal protein L13
           [Populus trichocarpa]
          Length = 205

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/44 (65%), Positives = 30/44 (68%)
 Frame = -3

Query: 410 SEHPFGDRPIEPYEMXXXXXXXXXXXXXRAMIRAQKKAEQQEQG 279
           SEHPFGDRP+EPY M             RAMIRAQKKAEQQEQG
Sbjct: 144 SEHPFGDRPLEPYVMPPRQVREMRPRARRAMIRAQKKAEQQEQG 187


>ref|XP_010245183.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like isoform X2
           [Nelumbo nucifera]
          Length = 170

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/50 (56%), Positives = 33/50 (66%)
 Frame = -3

Query: 410 SEHPFGDRPIEPYEMXXXXXXXXXXXXXRAMIRAQKKAEQQEQGLSTYKR 261
           SEHPFGDRP+EPY M             RAMIRAQ+KAEQQ+QG +  K+
Sbjct: 108 SEHPFGDRPLEPYVMPPRKVREMRPRARRAMIRAQRKAEQQQQGAAETKK 157


>ref|XP_010245181.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like isoform X1
           [Nelumbo nucifera]
          Length = 204

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/50 (56%), Positives = 33/50 (66%)
 Frame = -3

Query: 410 SEHPFGDRPIEPYEMXXXXXXXXXXXXXRAMIRAQKKAEQQEQGLSTYKR 261
           SEHPFGDRP+EPY M             RAMIRAQ+KAEQQ+QG +  K+
Sbjct: 142 SEHPFGDRPLEPYVMPPRKVREMRPRARRAMIRAQRKAEQQQQGAAETKK 191


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