BLASTX nr result
ID: Forsythia23_contig00035911
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00035911
(409 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012837256.1| PREDICTED: pentatricopeptide repeat-containi... 243 5e-62
emb|CDP16837.1| unnamed protein product [Coffea canephora] 236 4e-60
ref|XP_011089738.1| PREDICTED: pentatricopeptide repeat-containi... 229 4e-58
ref|XP_011088706.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 225 8e-57
ref|XP_007200313.1| hypothetical protein PRUPE_ppa001249mg [Prun... 222 7e-56
ref|XP_012067167.1| PREDICTED: pentatricopeptide repeat-containi... 220 3e-55
gb|KDP42034.1| hypothetical protein JCGZ_03097 [Jatropha curcas] 220 3e-55
ref|XP_012458104.1| PREDICTED: pentatricopeptide repeat-containi... 220 3e-55
ref|XP_011458091.1| PREDICTED: pentatricopeptide repeat-containi... 219 4e-55
ref|XP_008235960.1| PREDICTED: pentatricopeptide repeat-containi... 219 4e-55
ref|XP_004290060.1| PREDICTED: pentatricopeptide repeat-containi... 219 4e-55
ref|XP_010269231.1| PREDICTED: pentatricopeptide repeat-containi... 218 1e-54
ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi... 217 2e-54
ref|XP_009345921.1| PREDICTED: pentatricopeptide repeat-containi... 217 3e-54
ref|XP_008382431.1| PREDICTED: pentatricopeptide repeat-containi... 216 5e-54
gb|KHG06443.1| hypothetical protein F383_04652 [Gossypium arboreum] 215 8e-54
gb|KHG06442.1| hypothetical protein F383_04652 [Gossypium arboreum] 215 8e-54
ref|XP_007041612.1| Pentatricopeptide repeat (PPR) superfamily p... 215 1e-53
ref|XP_007041611.1| Pentatricopeptide repeat (PPR) superfamily p... 215 1e-53
ref|XP_008356332.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 214 2e-53
>ref|XP_012837256.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Erythranthe guttatus] gi|848873397|ref|XP_012837257.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g17140 [Erythranthe guttatus]
gi|604333682|gb|EYU38033.1| hypothetical protein
MIMGU_mgv1a026472mg [Erythranthe guttata]
Length = 869
Score = 243 bits (619), Expect = 5e-62
Identities = 114/136 (83%), Positives = 125/136 (91%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCRKGK +EANK+L++MI G +PNTYTCNILLHSLW+EGK+AEAERL+QKMNERG GLD
Sbjct: 406 YCRKGKKVEANKILNEMISGGCLPNTYTCNILLHSLWREGKIAEAERLMQKMNERGEGLD 465
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
VSCNIVIDGLCRSGKVDKAVEIVSEMW HGSAALGNLGN +IGLVD N + CLPDLITY
Sbjct: 466 TVSCNIVIDGLCRSGKVDKAVEIVSEMWVHGSAALGNLGNSYIGLVDENRKICLPDLITY 525
Query: 362 STVINGLCKDGRLDEA 409
STVINGLC+DGRLDEA
Sbjct: 526 STVINGLCRDGRLDEA 541
Score = 77.0 bits (188), Expect = 5e-12
Identities = 45/136 (33%), Positives = 70/136 (51%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G ++ ++L M + G VPN N + S KEG EAERL+++M E G +
Sbjct: 192 YCRYGLALKGMELLDLMKKMGSVPNIVIYNTFIASFCKEGNNDEAERLVERMKEDGLAPN 251
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
V+ N I LC+SGK+ +A I +M G L N P+ +T+
Sbjct: 252 VVTFNTRISALCKSGKILEASRIFRDMQMDGELGLPN-----------------PNAVTH 294
Query: 362 STVINGLCKDGRLDEA 409
+ +++G C++G L+EA
Sbjct: 295 NLMLDGFCREGMLEEA 310
Score = 65.9 bits (159), Expect = 1e-08
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGYV----PNTYTCNILLHSLWKEGKVAEAERLLQKMNERGH 172
C+ GK++EA+++ DM G + PN T N++L +EG + EA+ L+ M G
Sbjct: 263 CKSGKILEASRIFRDMQMDGELGLPNPNAVTHNLMLDGFCREGMLEEAKTLVLSMKRDGI 322
Query: 173 GLDPVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFI-GLVDNN------- 328
S NI + GL R+GK +A ++ EM G+ N+ I GL N+
Sbjct: 323 FSSVDSYNIWLLGLVRNGKFLEAQAVLEEMADDGARPNAYSYNILIDGLCKNDMFADARR 382
Query: 329 ------GEKCLPDLITYSTVINGLCKDGRLDEA 409
PD+ TYS ++ G C+ G+ EA
Sbjct: 383 VVDLMITSGVSPDVATYSALLQGYCRKGKKVEA 415
Score = 57.8 bits (138), Expect = 3e-06
Identities = 36/135 (26%), Positives = 66/135 (48%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDP 184
CR G++ EA K +M+ P+++ NI LH+L K GK++ A ++L+ M +G
Sbjct: 533 CRDGRLDEAKKKFVEMLGRKLCPDSFVYNIFLHNLCKRGKISSAFQVLKDMERKGCNKTL 592
Query: 185 VSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITYS 364
+ N +I GL + +V + ++ EM G + P++ TY+
Sbjct: 593 ETYNCLIFGLGSTNQVFEMFGLMDEMKERGIS---------------------PNVYTYN 631
Query: 365 TVINGLCKDGRLDEA 409
V++ +C+ R +EA
Sbjct: 632 IVLSSICEGERSEEA 646
>emb|CDP16837.1| unnamed protein product [Coffea canephora]
Length = 795
Score = 236 bits (602), Expect = 4e-60
Identities = 111/138 (80%), Positives = 126/138 (91%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YC KGKV+EAN+VLH+M++ GY PN YTCNILLHSLWKEGK++EAE+LLQKMNE G LD
Sbjct: 269 YCCKGKVVEANRVLHEMMKNGYTPNNYTCNILLHSLWKEGKISEAEKLLQKMNEGGCDLD 328
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLI 355
VSCNIVIDGLCR+G+VDKAVEIVSEMWTHGSAALGN+GN FIGLVD NNG+KC+PDLI
Sbjct: 329 IVSCNIVIDGLCRTGRVDKAVEIVSEMWTHGSAALGNIGNSFIGLVDEGNNGKKCMPDLI 388
Query: 356 TYSTVINGLCKDGRLDEA 409
TYST+I+GLC DGRLDEA
Sbjct: 389 TYSTIISGLCNDGRLDEA 406
Score = 64.7 bits (156), Expect = 2e-08
Identities = 43/136 (31%), Positives = 63/136 (46%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G + ++L M PN N L+ KEGK EAE+L+++M E G D
Sbjct: 55 YCRVGLASKGLELLDLMKEMDVFPNLVIYNTLIACFCKEGKTEEAEKLVEQMREDGLVPD 114
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
V+ N I LC+SG + +A I +M + L L + IT+
Sbjct: 115 VVTFNSRISALCKSGNMLEASRIFRDMQMNEELGLPKL-----------------NTITF 157
Query: 362 STVINGLCKDGRLDEA 409
+ ++ G C +G LDEA
Sbjct: 158 NLMLEGFCNEGMLDEA 173
Score = 64.3 bits (155), Expect = 3e-08
Identities = 37/120 (30%), Positives = 59/120 (49%)
Frame = +2
Query: 50 MIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSGK 229
MI AG +P TYT N+L+ L G++ +A++L KM E+G + S I++ G CR G
Sbjct: 1 MIFAGILPETYTFNLLIGGLCDSGRLEDAQKLFDKMREKGCEPNEFSFGILVRGYCRVGL 60
Query: 230 VDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITYSTVINGLCKDGRLDEA 409
K +E++ M P+L+ Y+T+I CK+G+ +EA
Sbjct: 61 ASKGLELLDLM---------------------KEMDVFPNLVIYNTLIACFCKEGKTEEA 99
Score = 63.2 bits (152), Expect = 7e-08
Identities = 40/136 (29%), Positives = 69/136 (50%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C +G + EA ++ M + PN + NI L+ L + KV +A+ +L+ M ++G
Sbjct: 164 FCNEGMLDEAKTLVQSMKQNDVFPNVESYNIWLYGLVRNKKVFDAQLVLKDMVDQGVEPS 223
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
S NIV++GLC++G + A +GL+ + G PD +TY
Sbjct: 224 TYSYNIVMNGLCKNGMLGDA-------------------RTLMGLMTSGG--ISPDTVTY 262
Query: 362 STVINGLCKDGRLDEA 409
ST+++G C G++ EA
Sbjct: 263 STLLHGYCCKGKVVEA 278
Score = 59.7 bits (143), Expect = 7e-07
Identities = 32/91 (35%), Positives = 51/91 (56%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDP 184
C+KGKV A +VL DM + G N T N L+ L + ++ E L+ +M ERG +
Sbjct: 433 CKKGKVSSAFQVLKDMEKKGCNKNLNTYNSLILGLRSKSQIFEMSGLMDEMRERGISPNV 492
Query: 185 VSCNIVIDGLCRSGKVDKAVEIVSEMWTHGS 277
+ N VI LC +G+ ++A+ ++ EM G+
Sbjct: 493 FTYNTVISCLCEAGRTEEAISLLEEMLQKGT 523
>ref|XP_011089738.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Sesamum indicum]
gi|747084641|ref|XP_011089739.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17140-like [Sesamum indicum]
gi|747084643|ref|XP_011089740.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17140-like [Sesamum indicum]
Length = 869
Score = 229 bits (585), Expect = 4e-58
Identities = 102/136 (75%), Positives = 128/136 (94%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C++ K +EA+KVL++MI +G +PNTYTCN++LH+LW+EGK+ EAERL+QKMNERG+GLD
Sbjct: 404 HCKQRKGVEASKVLNEMIMSGCLPNTYTCNVMLHNLWREGKIEEAERLMQKMNERGNGLD 463
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
VSCNIVIDGLCR+GKVD+AVEIV+EMWTHGSAALGNLGNL+IGLVD N ++C+PDLITY
Sbjct: 464 TVSCNIVIDGLCRTGKVDRAVEIVNEMWTHGSAALGNLGNLYIGLVDGNRKRCMPDLITY 523
Query: 362 STVINGLCKDGRLDEA 409
ST+INGLC+DGRL+EA
Sbjct: 524 STIINGLCRDGRLEEA 539
Score = 70.5 bits (171), Expect = 4e-10
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMN-ERGHGL 178
+CR+G EA++++ M G PN T NI + +L K GK+ EA R+ + M + GL
Sbjct: 225 FCREGNNDEADRLVERMKEDGLAPNVVTFNIRISALSKAGKILEASRIFRDMQMDEELGL 284
Query: 179 ---DPVSCNIVIDGLCRSGKVDKAVEIVSEM--------------WTHGSAALGNLGNLF 307
+ V+ N+++DG CR G +++A +V M W G G +
Sbjct: 285 PRPNVVTHNLMLDGFCREGMLEEAHTLVQSMKRDAIFSSVESYNIWLLGLVRNGKIWEAQ 344
Query: 308 IGLVDNNGEKCLPDLITYSTVINGLCKDGRLDEA 409
L + E P++ +Y+ +INGLCK+ + +A
Sbjct: 345 TVLKEMADEGVGPNIYSYNILINGLCKNDMVADA 378
Score = 64.7 bits (156), Expect = 2e-08
Identities = 43/136 (31%), Positives = 70/136 (51%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+CR+G + EA+ ++ M R + + NI L L + GK+ EA+ +L++M + G G +
Sbjct: 299 FCREGMLEEAHTLVQSMKRDAIFSSVESYNIWLLGLVRNGKIWEAQTVLKEMADEGVGPN 358
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
S NI+I+GLC++ V A +VS M + G + PD+ TY
Sbjct: 359 IYSYNILINGLCKNDMVADARGVVSLMISGGIS---------------------PDVATY 397
Query: 362 STVINGLCKDGRLDEA 409
ST++ G CK + EA
Sbjct: 398 STLLQGHCKQRKGVEA 413
Score = 63.5 bits (153), Expect = 5e-08
Identities = 41/136 (30%), Positives = 68/136 (50%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
Y R G + ++L M R G VPN N L+ S +EG EA+RL+++M E G +
Sbjct: 190 YSRCGLASKGLELLDLMKRIGLVPNLVIYNTLVASFCREGNNDEADRLVERMKEDGLAPN 249
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
V+ NI I L ++GK+ +A I +M L P+++T+
Sbjct: 250 VVTFNIRISALSKAGKILEASRIFRDMQMDEELGLPR-----------------PNVVTH 292
Query: 362 STVINGLCKDGRLDEA 409
+ +++G C++G L+EA
Sbjct: 293 NLMLDGFCREGMLEEA 308
>ref|XP_011088706.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g17140-like [Sesamum indicum]
Length = 869
Score = 225 bits (574), Expect = 8e-57
Identities = 101/136 (74%), Positives = 126/136 (92%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C++ K +EA+KVL++MI +G +PNTYTCN++LH+LW+EG + EAERL+QKMNERG+GLD
Sbjct: 404 HCKQRKGVEASKVLNEMIMSGCLPNTYTCNVMLHNLWREGNIEEAERLMQKMNERGNGLD 463
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
VSCNIVIDGLCR+ KVD+AVEIV+EMWTHGSAALGNLGNL+IGLVD N ++CLPDLITY
Sbjct: 464 TVSCNIVIDGLCRTRKVDRAVEIVNEMWTHGSAALGNLGNLYIGLVDGNRKRCLPDLITY 523
Query: 362 STVINGLCKDGRLDEA 409
ST+INGLC+DGRL+EA
Sbjct: 524 STIINGLCRDGRLEEA 539
Score = 70.1 bits (170), Expect = 6e-10
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMN-ERGHGL 178
+CR+G EA++++ M G PN T NI + +L K GK+ EA R+ + M + GL
Sbjct: 225 FCREGTNDEADRLVERMKEDGLAPNVVTFNIRISALSKAGKILEASRIFRDMQMDEELGL 284
Query: 179 ---DPVSCNIVIDGLCRSGKVDKAVEIVSEM--------------WTHGSAALGNLGNLF 307
+ V+ N+++DG CR G +++A +V M W G G +
Sbjct: 285 PRPNVVTHNLMLDGFCREGMLEEAHTLVQSMKRDAIFSSVESYNIWLLGLVRNGKIWEAQ 344
Query: 308 IGLVDNNGEKCLPDLITYSTVINGLCKDGRLDEA 409
L + E P++ +Y+ +INGLCK+ + +A
Sbjct: 345 TVLKEMADEGVGPNIYSYNILINGLCKNDMVADA 378
Score = 64.7 bits (156), Expect = 2e-08
Identities = 43/136 (31%), Positives = 70/136 (51%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+CR+G + EA+ ++ M R + + NI L L + GK+ EA+ +L++M + G G +
Sbjct: 299 FCREGMLEEAHTLVQSMKRDAIFSSVESYNIWLLGLVRNGKIWEAQTVLKEMADEGVGPN 358
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
S NI+I+GLC++ V A +VS M + G + PD+ TY
Sbjct: 359 IYSYNILINGLCKNDMVADARGVVSLMISGGIS---------------------PDVATY 397
Query: 362 STVINGLCKDGRLDEA 409
ST++ G CK + EA
Sbjct: 398 STLLQGHCKQRKGVEA 413
Score = 63.5 bits (153), Expect = 5e-08
Identities = 41/136 (30%), Positives = 68/136 (50%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
Y R G + ++L M R G VPN N L+ S +EG EA+RL+++M E G +
Sbjct: 190 YSRCGLASKGLELLDLMKRIGLVPNLVIYNTLIASFCREGTNDEADRLVERMKEDGLAPN 249
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
V+ NI I L ++GK+ +A I +M L P+++T+
Sbjct: 250 VVTFNIRISALSKAGKILEASRIFRDMQMDEELGLPR-----------------PNVVTH 292
Query: 362 STVINGLCKDGRLDEA 409
+ +++G C++G L+EA
Sbjct: 293 NLMLDGFCREGMLEEA 308
>ref|XP_007200313.1| hypothetical protein PRUPE_ppa001249mg [Prunus persica]
gi|462395713|gb|EMJ01512.1| hypothetical protein
PRUPE_ppa001249mg [Prunus persica]
Length = 872
Score = 222 bits (566), Expect = 7e-56
Identities = 104/138 (75%), Positives = 120/138 (86%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C KGKV EA+ +LH+M+ PNT+TCNILLHSLWKEG+ +EAE LLQKMNERG+GLD
Sbjct: 409 FCNKGKVFEASNILHEMMMNNCFPNTHTCNILLHSLWKEGRTSEAEELLQKMNERGYGLD 468
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLI 355
V+CNIVIDGLC GK+DKA+EIVS MWTHGSAALGNLGN FIGLVD NNG+KC+PDLI
Sbjct: 469 TVTCNIVIDGLCNDGKLDKAIEIVSGMWTHGSAALGNLGNSFIGLVDDSNNGKKCIPDLI 528
Query: 356 TYSTVINGLCKDGRLDEA 409
TYST+I+GLCK GRLDEA
Sbjct: 529 TYSTIISGLCKAGRLDEA 546
Score = 68.2 bits (165), Expect = 2e-09
Identities = 40/136 (29%), Positives = 65/136 (47%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G + +VL M +PN N L+ S K+ K +AE+L+++M E G D
Sbjct: 195 YCRAGLAVRGLEVLDQMRSCNLLPNRVVYNTLISSFCKQSKTDDAEKLVERMREDGMLPD 254
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
V+ N I LC +GK+ +A I +M +D P+++TY
Sbjct: 255 AVTFNSRISALCSAGKILEASRIFRDMH-----------------IDQEMGLPQPNVVTY 297
Query: 362 STVINGLCKDGRLDEA 409
+ ++ G C++ L+EA
Sbjct: 298 NLMLQGFCREDMLEEA 313
Score = 67.4 bits (163), Expect = 4e-09
Identities = 45/136 (33%), Positives = 71/136 (52%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+CR+ + EA + M +AG N + NI L L K GK+ EA +L++M ++G +
Sbjct: 304 FCREDMLEEAENLFKSMEKAGNFINLESYNIWLLGLVKNGKLLEARLVLKEMVDKGIEPN 363
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
S NIVI+GLC++G + A +++ M V NN PD +TY
Sbjct: 364 IYSYNIVINGLCKNGMLRDARMVMTLM------------------VRNN---ISPDTVTY 402
Query: 362 STVINGLCKDGRLDEA 409
ST+++G C G++ EA
Sbjct: 403 STLLHGFCNKGKVFEA 418
Score = 64.3 bits (155), Expect = 3e-08
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMN-ERGHGL 178
+C++ K +A K++ M G +P+ T N + +L GK+ EA R+ + M+ ++ GL
Sbjct: 230 FCKQSKTDDAEKLVERMREDGMLPDAVTFNSRISALCSAGKILEASRIFRDMHIDQEMGL 289
Query: 179 ---DPVSCNIVIDGLCRSGKVDKAVEIVSEM--------------WTHGSAALGNLGNLF 307
+ V+ N+++ G CR +++A + M W G G L
Sbjct: 290 PQPNVVTYNLMLQGFCREDMLEEAENLFKSMEKAGNFINLESYNIWLLGLVKNGKLLEAR 349
Query: 308 IGLVDNNGEKCLPDLITYSTVINGLCKDGRLDEA 409
+ L + + P++ +Y+ VINGLCK+G L +A
Sbjct: 350 LVLKEMVDKGIEPNIYSYNIVINGLCKNGMLRDA 383
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/121 (28%), Positives = 59/121 (48%)
Frame = +2
Query: 47 DMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSG 226
DMI +G P TYT N+L+ SL + ++ +A + KM E+G + S I++ G CR+G
Sbjct: 140 DMIVSGMKPETYTFNLLICSLCESDRLDDAREVFDKMREKGCQPNEYSVGILVRGYCRAG 199
Query: 227 KVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITYSTVINGLCKDGRLDE 406
+ +E++ +M LP+ + Y+T+I+ CK + D+
Sbjct: 200 LAVRGLEVLDQM---------------------RSCNLLPNRVVYNTLISSFCKQSKTDD 238
Query: 407 A 409
A
Sbjct: 239 A 239
>ref|XP_012067167.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Jatropha curcas]
Length = 873
Score = 220 bits (561), Expect = 3e-55
Identities = 100/138 (72%), Positives = 122/138 (88%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YC KGK+ EAN +LHDM+R PN YTCNILLHSLWKEG+++EAE LL++MNE+G+G+D
Sbjct: 406 YCNKGKIFEANNLLHDMMRNNCFPNIYTCNILLHSLWKEGRISEAEELLKRMNEKGYGVD 465
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG--EKCLPDLI 355
V+CNIVIDGLC SG++DKA+EIV+EMWTHGSAALGNLGN FIGLVDN+ +KC+PDLI
Sbjct: 466 TVTCNIVIDGLCNSGQLDKAIEIVTEMWTHGSAALGNLGNSFIGLVDNSSSTKKCIPDLI 525
Query: 356 TYSTVINGLCKDGRLDEA 409
TYST+I+GLCK GRLD+A
Sbjct: 526 TYSTIISGLCKAGRLDDA 543
Score = 75.5 bits (184), Expect = 1e-11
Identities = 45/136 (33%), Positives = 69/136 (50%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G + ++L +M G+ PN N L+ S +EGK+ +AE L+ +M E G D
Sbjct: 192 YCRAGFASKGLELLREMRSLGFSPNRVVYNTLISSFCREGKINDAEELVDRMIEEGLSPD 251
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
V+ N I LC SGK+ +A I +M +D + P++ITY
Sbjct: 252 VVTFNSRISALCSSGKILEASRIFRDM-----------------QIDEDLGLPRPNVITY 294
Query: 362 STVINGLCKDGRLDEA 409
+ ++ G CK+G L+EA
Sbjct: 295 NLMLMGFCKEGMLEEA 310
Score = 73.2 bits (178), Expect = 7e-11
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 14/148 (9%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
R+ +V + +L DM+ AG P TYT N+L+ L G + +A+ L KM E+G +
Sbjct: 124 RQSRVDSVSWLLEDMVIAGVSPETYTFNLLIGLLCDSGCLEDAQELFDKMPEKGCKPNEF 183
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIG-------------LVDNN 328
S I++ G CR+G K +E++ EM + G + + N I LVD
Sbjct: 184 SFGILVRGYCRAGFASKGLELLREMRSLGFSPNRVVYNTLISSFCREGKINDAEELVDRM 243
Query: 329 GEKCL-PDLITYSTVINGLCKDGRLDEA 409
E+ L PD++T+++ I+ LC G++ EA
Sbjct: 244 IEEGLSPDVVTFNSRISALCSSGKILEA 271
Score = 67.4 bits (163), Expect = 4e-09
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C++G + EA ++ M R G + N+ + NI L L ++G + EA+ + ++M G G++
Sbjct: 301 FCKEGMLEEARTLVETMKRNGNMMNSGSYNIWLLGLVRKGMLLEAQLVFKEM--LGIGIE 358
Query: 182 P--VSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLI 355
P S NIVIDGLC++G + A + +GL+ +G PD I
Sbjct: 359 PNIYSYNIVIDGLCKNGMLSDA-------------------RMLMGLMIQSG--ISPDTI 397
Query: 356 TYSTVINGLCKDGRLDEA 409
TYST+++G C G++ EA
Sbjct: 398 TYSTLLHGYCNKGKIFEA 415
Score = 67.0 bits (162), Expect = 5e-09
Identities = 39/134 (29%), Positives = 68/134 (50%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
RKG ++EA V +M+ G PN Y+ NI++ L K G +++A L+ M + G D +
Sbjct: 338 RKGMLLEAQLVFKEMLGIGIEPNIYSYNIVIDGLCKNGMLSDARMLMGLMIQSGISPDTI 397
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITYST 367
+ + ++ G C GK+ +A NL ++ NN C P++ T +
Sbjct: 398 TYSTLLHGYCNKGKIFEA------------------NNLLHDMMRNN---CFPNIYTCNI 436
Query: 368 VINGLCKDGRLDEA 409
+++ L K+GR+ EA
Sbjct: 437 LLHSLWKEGRISEA 450
>gb|KDP42034.1| hypothetical protein JCGZ_03097 [Jatropha curcas]
Length = 736
Score = 220 bits (561), Expect = 3e-55
Identities = 100/138 (72%), Positives = 122/138 (88%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YC KGK+ EAN +LHDM+R PN YTCNILLHSLWKEG+++EAE LL++MNE+G+G+D
Sbjct: 269 YCNKGKIFEANNLLHDMMRNNCFPNIYTCNILLHSLWKEGRISEAEELLKRMNEKGYGVD 328
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG--EKCLPDLI 355
V+CNIVIDGLC SG++DKA+EIV+EMWTHGSAALGNLGN FIGLVDN+ +KC+PDLI
Sbjct: 329 TVTCNIVIDGLCNSGQLDKAIEIVTEMWTHGSAALGNLGNSFIGLVDNSSSTKKCIPDLI 388
Query: 356 TYSTVINGLCKDGRLDEA 409
TYST+I+GLCK GRLD+A
Sbjct: 389 TYSTIISGLCKAGRLDDA 406
Score = 75.5 bits (184), Expect = 1e-11
Identities = 45/136 (33%), Positives = 69/136 (50%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G + ++L +M G+ PN N L+ S +EGK+ +AE L+ +M E G D
Sbjct: 55 YCRAGFASKGLELLREMRSLGFSPNRVVYNTLISSFCREGKINDAEELVDRMIEEGLSPD 114
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
V+ N I LC SGK+ +A I +M +D + P++ITY
Sbjct: 115 VVTFNSRISALCSSGKILEASRIFRDM-----------------QIDEDLGLPRPNVITY 157
Query: 362 STVINGLCKDGRLDEA 409
+ ++ G CK+G L+EA
Sbjct: 158 NLMLMGFCKEGMLEEA 173
Score = 67.4 bits (163), Expect = 4e-09
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C++G + EA ++ M R G + N+ + NI L L ++G + EA+ + ++M G G++
Sbjct: 164 FCKEGMLEEARTLVETMKRNGNMMNSGSYNIWLLGLVRKGMLLEAQLVFKEM--LGIGIE 221
Query: 182 P--VSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLI 355
P S NIVIDGLC++G + A + +GL+ +G PD I
Sbjct: 222 PNIYSYNIVIDGLCKNGMLSDA-------------------RMLMGLMIQSG--ISPDTI 260
Query: 356 TYSTVINGLCKDGRLDEA 409
TYST+++G C G++ EA
Sbjct: 261 TYSTLLHGYCNKGKIFEA 278
Score = 67.0 bits (162), Expect = 5e-09
Identities = 39/134 (29%), Positives = 68/134 (50%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
RKG ++EA V +M+ G PN Y+ NI++ L K G +++A L+ M + G D +
Sbjct: 201 RKGMLLEAQLVFKEMLGIGIEPNIYSYNIVIDGLCKNGMLSDARMLMGLMIQSGISPDTI 260
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITYST 367
+ + ++ G C GK+ +A NL ++ NN C P++ T +
Sbjct: 261 TYSTLLHGYCNKGKIFEA------------------NNLLHDMMRNN---CFPNIYTCNI 299
Query: 368 VINGLCKDGRLDEA 409
+++ L K+GR+ EA
Sbjct: 300 LLHSLWKEGRISEA 313
Score = 66.2 bits (160), Expect = 8e-09
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 14/134 (10%)
Frame = +2
Query: 50 MIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSGK 229
M+ AG P TYT N+L+ L G + +A+ L KM E+G + S I++ G CR+G
Sbjct: 1 MVIAGVSPETYTFNLLIGLLCDSGCLEDAQELFDKMPEKGCKPNEFSFGILVRGYCRAGF 60
Query: 230 VDKAVEIVSEMWTHGSAALGNLGNLFIG-------------LVDNNGEKCL-PDLITYST 367
K +E++ EM + G + + N I LVD E+ L PD++T+++
Sbjct: 61 ASKGLELLREMRSLGFSPNRVVYNTLISSFCREGKINDAEELVDRMIEEGLSPDVVTFNS 120
Query: 368 VINGLCKDGRLDEA 409
I+ LC G++ EA
Sbjct: 121 RISALCSSGKILEA 134
>ref|XP_012458104.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Gossypium raimondii] gi|823251032|ref|XP_012458105.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g17140 [Gossypium raimondii]
gi|763810919|gb|KJB77821.1| hypothetical protein
B456_012G159300 [Gossypium raimondii]
gi|763810920|gb|KJB77822.1| hypothetical protein
B456_012G159300 [Gossypium raimondii]
gi|763810921|gb|KJB77823.1| hypothetical protein
B456_012G159300 [Gossypium raimondii]
Length = 868
Score = 220 bits (560), Expect = 3e-55
Identities = 100/138 (72%), Positives = 122/138 (88%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCRKGK+ EAN +L++M+R+GYVPNTYTCNILLHSLWKEGK+ EAE LLQKMNE+G+G+D
Sbjct: 404 YCRKGKLSEANAILNEMMRSGYVPNTYTCNILLHSLWKEGKILEAEELLQKMNEKGYGVD 463
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLI 355
V+CNIVIDGLC+SGK+DKA+EI EMWTHGSAALGNLGN FIGLVD + +C+PDL+
Sbjct: 464 TVTCNIVIDGLCKSGKLDKAMEIAHEMWTHGSAALGNLGNSFIGLVDDVSRSMRCIPDLV 523
Query: 356 TYSTVINGLCKDGRLDEA 409
TYS +I+ LCK G++DEA
Sbjct: 524 TYSIIISALCKAGKIDEA 541
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 14/148 (9%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
R K++EA VL DM+ G PN Y+ NI++ L K G +++A ++ + G D V
Sbjct: 336 RNAKLVEAQLVLEDMVDKGVEPNIYSYNIVMDGLCKNGMLSDARMVMGFIVRSGLSPDTV 395
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG-----EKCLP-- 346
+ + ++ G CR GK+ +A I++EM G N+ + + G E+ L
Sbjct: 396 TYSTLLHGYCRKGKLSEANAILNEMMRSGYVPNTYTCNILLHSLWKEGKILEAEELLQKM 455
Query: 347 -------DLITYSTVINGLCKDGRLDEA 409
D +T + VI+GLCK G+LD+A
Sbjct: 456 NEKGYGVDTVTCNIVIDGLCKSGKLDKA 483
Score = 74.3 bits (181), Expect = 3e-11
Identities = 46/136 (33%), Positives = 68/136 (50%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G + ++L +M +G +PN N L+ S KEGK +AE+L+++M E G D
Sbjct: 190 YCRFGLANKGLELLDEMRSSGILPNRVVYNTLISSFCKEGKTGDAEKLVERMREDGLFPD 249
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
V+ N I LC +GKV +A I +M + L P++ITY
Sbjct: 250 VVTFNARISALCSAGKVLEASRIFRDMQIDEALGLPR-----------------PNVITY 292
Query: 362 STVINGLCKDGRLDEA 409
+ ++ G CK G L EA
Sbjct: 293 NLMLEGFCKQGMLVEA 308
Score = 71.2 bits (173), Expect = 2e-10
Identities = 41/136 (30%), Positives = 73/136 (53%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C++G ++EA ++ M + G + N + NI L L + K+ EA+ +L+ M ++G +
Sbjct: 299 FCKQGMLVEAKALVESMEKNGDLMNLDSYNIWLLGLLRNAKLVEAQLVLEDMVDKGVEPN 358
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
S NIV+DGLC++G + A + +G + +G PD +TY
Sbjct: 359 IYSYNIVMDGLCKNGMLSDA-------------------RMVMGFIVRSG--LSPDTVTY 397
Query: 362 STVINGLCKDGRLDEA 409
ST+++G C+ G+L EA
Sbjct: 398 STLLHGYCRKGKLSEA 413
Score = 65.9 bits (159), Expect = 1e-08
Identities = 38/121 (31%), Positives = 60/121 (49%)
Frame = +2
Query: 47 DMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSG 226
DM+ AG P TYT N+L+ L G + +A L KM E+G + S I++ G CR G
Sbjct: 135 DMVLAGVSPETYTFNLLICGLCDLGHLEDARELFDKMPEKGCLPNEFSFGILVRGYCRFG 194
Query: 227 KVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITYSTVINGLCKDGRLDE 406
+K +E++ EM + G LP+ + Y+T+I+ CK+G+ +
Sbjct: 195 LANKGLELLDEMRSSG---------------------ILPNRVVYNTLISSFCKEGKTGD 233
Query: 407 A 409
A
Sbjct: 234 A 234
Score = 57.0 bits (136), Expect = 5e-06
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 37/171 (21%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGY-----------------------VPNTYTCNILLHSLWK 115
C+ GK+ +A ++ H+M G +P+ T +I++ +L K
Sbjct: 475 CKSGKLDKAMEIAHEMWTHGSAALGNLGNSFIGLVDDVSRSMRCIPDLVTYSIIISALCK 534
Query: 116 EGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGS------ 277
GK+ EA++ ++M + D V + I C+ GK+ A ++ +M G
Sbjct: 535 AGKIDEAKKKFREMMGKNLQPDAVIFDTFIHIFCKEGKISSAFRVLKDMEKKGCNKSVQT 594
Query: 278 -----AALGNLGNLF--IGLVDNNGEKCL-PDLITYSTVINGLCKDGRLDE 406
LG+ +F GLVD E+ + P++ Y+ +I LCK+G++ +
Sbjct: 595 YNSLILGLGSKNQIFEIYGLVDEMRERGITPNVCIYNNIIQSLCKNGKIQD 645
>ref|XP_011458091.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
isoform X2 [Fragaria vesca subsp. vesca]
Length = 871
Score = 219 bits (559), Expect = 4e-55
Identities = 103/138 (74%), Positives = 118/138 (85%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YC KGKV EA+ VL +MI PNT+TCNILLHSLWKEG+++EAE LLQKMNE+G+GLD
Sbjct: 409 YCNKGKVFEASNVLQEMIMKNCFPNTHTCNILLHSLWKEGRISEAEELLQKMNEKGYGLD 468
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLI 355
V+CNIVIDGLC GK+DKA+EIVS MWTHG AALGNLGN F+GLVD NNG KCLPDLI
Sbjct: 469 TVTCNIVIDGLCNDGKLDKAIEIVSGMWTHGGAALGNLGNSFVGLVDDCNNGNKCLPDLI 528
Query: 356 TYSTVINGLCKDGRLDEA 409
+YST+I+GLCK GRLDEA
Sbjct: 529 SYSTIISGLCKAGRLDEA 546
Score = 73.2 bits (178), Expect = 7e-11
Identities = 47/136 (34%), Positives = 69/136 (50%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G +A VL +M G N N L+ S KEG+ EAE+L+++M E G D
Sbjct: 195 YCRAGFGSDALDVLDEMRGCGVGVNRVVYNTLVSSFCKEGRTDEAEKLVERMREEGMFPD 254
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
++ N I LC +GK+ +A I +M H ALG P+++TY
Sbjct: 255 VITFNSRISALCSAGKILEASRIFRDM--HMDQALG---------------LPQPNVVTY 297
Query: 362 STVINGLCKDGRLDEA 409
+ ++ G CK+G L+EA
Sbjct: 298 NLMLQGFCKEGMLEEA 313
Score = 67.4 bits (163), Expect = 4e-09
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 18/153 (11%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGYV----PNTYTCNILLHSLWKEGKVAEAERLLQKMNERGH 172
C GK++EA+++ DM + PN T N++L KEG + EAE L + M + G
Sbjct: 266 CSAGKILEASRIFRDMHMDQALGLPQPNVVTYNLMLQGFCKEGMLEEAESLFKSMEKAGG 325
Query: 173 GLDPVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG------- 331
++ S NI + GL R+ K+ +A ++ EM G N+ I + NG
Sbjct: 326 LINLESYNIWLLGLVRNKKLLEARLVLKEMVHKGIELNIYSYNILINGLCKNGMLRDARM 385
Query: 332 -------EKCLPDLITYSTVINGLCKDGRLDEA 409
PD +TYST+++G C G++ EA
Sbjct: 386 VMDLMARNNISPDTVTYSTLLHGYCNKGKVFEA 418
Score = 59.3 bits (142), Expect = 1e-06
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 14/135 (10%)
Frame = +2
Query: 47 DMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSG 226
DMI +G P TYT N+L+ +L ++ +A ++ KM ++G + S I++ G CR+G
Sbjct: 140 DMIASGVRPQTYTFNLLICALCDCSRLEDARQVFDKMRDKGCVPNEYSVAILVRGYCRAG 199
Query: 227 KVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG--------------EKCLPDLITYS 364
A++++ EM G + N + G E PD+IT++
Sbjct: 200 FGSDALDVLDEMRGCGVGVNRVVYNTLVSSFCKEGRTDEAEKLVERMREEGMFPDVITFN 259
Query: 365 TVINGLCKDGRLDEA 409
+ I+ LC G++ EA
Sbjct: 260 SRISALCSAGKILEA 274
>ref|XP_008235960.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Prunus mume]
Length = 873
Score = 219 bits (559), Expect = 4e-55
Identities = 103/138 (74%), Positives = 119/138 (86%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C KGKV EA+ +LH+M+ PNT+TCNILLHSLWKEG+ +EAE LLQKMNERG+GLD
Sbjct: 410 FCNKGKVFEASNILHEMMMNNCFPNTHTCNILLHSLWKEGRTSEAEELLQKMNERGYGLD 469
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLI 355
V+CNIVIDGLC GK+DKA+EIVS MWTHGSAALGNLGN FIGLVD NNG+ C+PDLI
Sbjct: 470 TVTCNIVIDGLCNDGKLDKAIEIVSGMWTHGSAALGNLGNSFIGLVDDSNNGKLCIPDLI 529
Query: 356 TYSTVINGLCKDGRLDEA 409
TYST+I+GLCK GRLDEA
Sbjct: 530 TYSTIISGLCKAGRLDEA 547
Score = 70.5 bits (171), Expect = 4e-10
Identities = 41/136 (30%), Positives = 66/136 (48%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G + +VL M +PN N L+ S K+GK +AE+L+++M E G D
Sbjct: 196 YCRAGLAVRGLEVLDQMRSCNLLPNRVVYNTLISSFCKQGKTDDAEKLVERMREDGMLPD 255
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
V+ N I LC +GK+ +A I +M +D P+++TY
Sbjct: 256 AVTFNSRISALCSAGKILEASRIFRDMH-----------------IDQEMGLPQPNVVTY 298
Query: 362 STVINGLCKDGRLDEA 409
+ ++ G C++ L+EA
Sbjct: 299 NLMLQGFCREDMLEEA 314
Score = 67.0 bits (162), Expect = 5e-09
Identities = 45/136 (33%), Positives = 71/136 (52%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+CR+ + EA + M +AG N + NI L L K GK+ EA +L++M ++G +
Sbjct: 305 FCREDMLEEAETLFKSMEKAGNFINLESYNIWLLGLVKNGKLLEARLVLKEMVDKGIEPN 364
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
S NIVI+GLC++G + A +++ M V NN PD +TY
Sbjct: 365 IYSYNIVINGLCKNGMLRDARMVMTLM------------------VRNN---ISPDTVTY 403
Query: 362 STVINGLCKDGRLDEA 409
ST+++G C G++ EA
Sbjct: 404 STLLHGFCNKGKVFEA 419
Score = 66.2 bits (160), Expect = 8e-09
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMN-ERGHGL 178
+C++GK +A K++ M G +P+ T N + +L GK+ EA R+ + M+ ++ GL
Sbjct: 231 FCKQGKTDDAEKLVERMREDGMLPDAVTFNSRISALCSAGKILEASRIFRDMHIDQEMGL 290
Query: 179 ---DPVSCNIVIDGLCRSGKVDKAVEIVSEM--------------WTHGSAALGNLGNLF 307
+ V+ N+++ G CR +++A + M W G G L
Sbjct: 291 PQPNVVTYNLMLQGFCREDMLEEAETLFKSMEKAGNFINLESYNIWLLGLVKNGKLLEAR 350
Query: 308 IGLVDNNGEKCLPDLITYSTVINGLCKDGRLDEA 409
+ L + + P++ +Y+ VINGLCK+G L +A
Sbjct: 351 LVLKEMVDKGIEPNIYSYNIVINGLCKNGMLRDA 384
Score = 64.7 bits (156), Expect = 2e-08
Identities = 35/121 (28%), Positives = 60/121 (49%)
Frame = +2
Query: 47 DMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSG 226
DMI +G P TYT N+L+ SL + ++ +A + KM E+G + S I++ G CR+G
Sbjct: 141 DMIVSGMKPETYTFNLLICSLCESDRLGDAREVFDKMREKGCQPNEYSVGILVRGYCRAG 200
Query: 227 KVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITYSTVINGLCKDGRLDE 406
+ +E++ +M LP+ + Y+T+I+ CK G+ D+
Sbjct: 201 LAVRGLEVLDQM---------------------RSCNLLPNRVVYNTLISSFCKQGKTDD 239
Query: 407 A 409
A
Sbjct: 240 A 240
>ref|XP_004290060.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
isoform X1 [Fragaria vesca subsp. vesca]
Length = 871
Score = 219 bits (559), Expect = 4e-55
Identities = 103/138 (74%), Positives = 118/138 (85%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YC KGKV EA+ VL +MI PNT+TCNILLHSLWKEG+++EAE LLQKMNE+G+GLD
Sbjct: 409 YCNKGKVFEASNVLQEMIMKNCFPNTHTCNILLHSLWKEGRISEAEELLQKMNEKGYGLD 468
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLI 355
V+CNIVIDGLC GK+DKA+EIVS MWTHG AALGNLGN F+GLVD NNG KCLPDLI
Sbjct: 469 TVTCNIVIDGLCNDGKLDKAIEIVSGMWTHGGAALGNLGNSFVGLVDDCNNGNKCLPDLI 528
Query: 356 TYSTVINGLCKDGRLDEA 409
+YST+I+GLCK GRLDEA
Sbjct: 529 SYSTIISGLCKAGRLDEA 546
Score = 73.2 bits (178), Expect = 7e-11
Identities = 47/136 (34%), Positives = 69/136 (50%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G +A VL +M G N N L+ S KEG+ EAE+L+++M E G D
Sbjct: 195 YCRAGFGSDALDVLDEMRGCGVGVNRVVYNTLVSSFCKEGRTDEAEKLVERMREEGMFPD 254
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
++ N I LC +GK+ +A I +M H ALG P+++TY
Sbjct: 255 VITFNSRISALCSAGKILEASRIFRDM--HMDQALG---------------LPQPNVVTY 297
Query: 362 STVINGLCKDGRLDEA 409
+ ++ G CK+G L+EA
Sbjct: 298 NLMLQGFCKEGMLEEA 313
Score = 67.4 bits (163), Expect = 4e-09
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 18/153 (11%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGYV----PNTYTCNILLHSLWKEGKVAEAERLLQKMNERGH 172
C GK++EA+++ DM + PN T N++L KEG + EAE L + M + G
Sbjct: 266 CSAGKILEASRIFRDMHMDQALGLPQPNVVTYNLMLQGFCKEGMLEEAESLFKSMEKAGG 325
Query: 173 GLDPVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG------- 331
++ S NI + GL R+ K+ +A ++ EM G N+ I + NG
Sbjct: 326 LINLESYNIWLLGLVRNKKLLEARLVLKEMVHKGIELNIYSYNILINGLCKNGMLRDARM 385
Query: 332 -------EKCLPDLITYSTVINGLCKDGRLDEA 409
PD +TYST+++G C G++ EA
Sbjct: 386 VMDLMARNNISPDTVTYSTLLHGYCNKGKVFEA 418
Score = 59.3 bits (142), Expect = 1e-06
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 14/135 (10%)
Frame = +2
Query: 47 DMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSG 226
DMI +G P TYT N+L+ +L ++ +A ++ KM ++G + S I++ G CR+G
Sbjct: 140 DMIASGVRPQTYTFNLLICALCDCSRLEDARQVFDKMRDKGCVPNEYSVAILVRGYCRAG 199
Query: 227 KVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG--------------EKCLPDLITYS 364
A++++ EM G + N + G E PD+IT++
Sbjct: 200 FGSDALDVLDEMRGCGVGVNRVVYNTLVSSFCKEGRTDEAEKLVERMREEGMFPDVITFN 259
Query: 365 TVINGLCKDGRLDEA 409
+ I+ LC G++ EA
Sbjct: 260 SRISALCSAGKILEA 274
>ref|XP_010269231.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Nelumbo nucifera] gi|720042423|ref|XP_010269232.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g17140 [Nelumbo nucifera]
Length = 877
Score = 218 bits (555), Expect = 1e-54
Identities = 104/139 (74%), Positives = 120/139 (86%), Gaps = 3/139 (2%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YC KGKV++ANK+LH+M+R G PNT+TCNILL SLWKEGK +EAE+LLQKMNERG+ LD
Sbjct: 404 YCSKGKVLDANKILHEMMRNGCYPNTFTCNILLQSLWKEGKTSEAEKLLQKMNERGYVLD 463
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG---EKCLPDL 352
V+CNIVIDGLCRSG +DKA+EIV EMW HGSAALG LGN FIGLVDNN +KCLPDL
Sbjct: 464 IVTCNIVIDGLCRSGMLDKAIEIVDEMWVHGSAALGVLGNSFIGLVDNNNNKRKKCLPDL 523
Query: 353 ITYSTVINGLCKDGRLDEA 409
ITYST+I+GLCK GR+ EA
Sbjct: 524 ITYSTIIDGLCKAGRMHEA 542
Score = 74.3 bits (181), Expect = 3e-11
Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 14/146 (9%)
Frame = +2
Query: 14 GKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSC 193
GK++ A VL +M+ G PN Y+ NIL+ L K G + +A +L M G D V+
Sbjct: 338 GKLLRARLVLTEMVDKGITPNIYSYNILIDGLCKSGMILDARMVLGLMISNGISPDTVTY 397
Query: 194 NIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG-----EKCLP---- 346
+I++ G C GKV A +I+ EM +G N+ + + G EK L
Sbjct: 398 SILLHGYCSKGKVLDANKILHEMMRNGCYPNTFTCNILLQSLWKEGKTSEAEKLLQKMNE 457
Query: 347 -----DLITYSTVINGLCKDGRLDEA 409
D++T + VI+GLC+ G LD+A
Sbjct: 458 RGYVLDIVTCNIVIDGLCRSGMLDKA 483
Score = 73.9 bits (180), Expect = 4e-11
Identities = 41/134 (30%), Positives = 71/134 (52%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
R ++ +++ DM+ AG P TYT NIL+ +L G++ +A++L KM+E+G +
Sbjct: 124 RDNRLELVSELYKDMLIAGVSPETYTFNILISALCDSGRLEDAQKLFDKMHEKGCKPNGF 183
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITYST 367
S I+I G CR+G + +E++ EM G C + + Y+T
Sbjct: 184 SFGILIHGYCRAGISSRGLELLDEMRRVG---------------------CSANTVIYNT 222
Query: 368 VINGLCKDGRLDEA 409
+I+ CK+GR++EA
Sbjct: 223 LISSFCKEGRIEEA 236
Score = 63.5 bits (153), Expect = 5e-08
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 19/154 (12%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGY---VPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHG 175
C GK++EA+K+ DM PN TCNI+L ++ G + +A+ L++ MN+ G
Sbjct: 263 CGLGKILEASKIFRDMQDDELGLPKPNHITCNIMLRGFFQGGMLDKADLLIESMNKDGF- 321
Query: 176 LDPVSCNIVIDGLCRSGKVDKAVEIVSEMWTHG--------SAALGNL--------GNLF 307
+ S NI + GL +GK+ +A +++EM G + + L +
Sbjct: 322 MKLESYNIWLMGLVTNGKLLRARLVLTEMVDKGITPNIYSYNILIDGLCKSGMILDARMV 381
Query: 308 IGLVDNNGEKCLPDLITYSTVINGLCKDGRLDEA 409
+GL+ +NG PD +TYS +++G C G++ +A
Sbjct: 382 LGLMISNG--ISPDTVTYSILLHGYCSKGKVLDA 413
Score = 63.2 bits (152), Expect = 7e-08
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 53/189 (28%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G ++L +M R G NT N L+ S KEG++ EAERL+++M R GL
Sbjct: 192 YCRAGISSRGLELLDEMRRVGCSANTVIYNTLISSFCKEGRIEEAERLVERM--RADGLF 249
Query: 182 P----------------------------------------VSCNIVIDGLCRSGKVDKA 241
P ++CNI++ G + G +DKA
Sbjct: 250 PNVVTFNARISALCGLGKILEASKIFRDMQDDELGLPKPNHITCNIMLRGFFQGGMLDKA 309
Query: 242 VEIVSEMWTHGSAALGNLGNLFIGLVDNN-------------GEKCLPDLITYSTVINGL 382
++ M G L + +GLV N + P++ +Y+ +I+GL
Sbjct: 310 DLLIESMNKDGFMKLESYNIWLMGLVTNGKLLRARLVLTEMVDKGITPNIYSYNILIDGL 369
Query: 383 CKDGRLDEA 409
CK G + +A
Sbjct: 370 CKSGMILDA 378
>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera] gi|731382609|ref|XP_010645876.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g17140 [Vitis vinifera] gi|297744485|emb|CBI37747.3|
unnamed protein product [Vitis vinifera]
Length = 878
Score = 217 bits (553), Expect = 2e-54
Identities = 103/137 (75%), Positives = 119/137 (86%), Gaps = 2/137 (1%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDP 184
C GKV++AN +LH+M+R G PNTYTCNILLHSLWKEG++ EAE+LLQKMNER + LD
Sbjct: 411 CSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDN 470
Query: 185 VSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLIT 358
V+CNIVIDGLC+SGK+D+AVEIV MW HGSAALGNLGN FIGLVD +NG+KCLPDLIT
Sbjct: 471 VTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLIT 530
Query: 359 YSTVINGLCKDGRLDEA 409
YS +INGLCK GRLDEA
Sbjct: 531 YSIIINGLCKAGRLDEA 547
Score = 78.6 bits (192), Expect = 2e-12
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 14/148 (9%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
R GK++EA L +M+ G PN Y+ N ++ L K G +++A ++ M G G D V
Sbjct: 342 RNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTV 401
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG-----EKCLP-- 346
+ + ++ G C +GKV KA I+ EM G + N+ + + G EK L
Sbjct: 402 TYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKM 461
Query: 347 -------DLITYSTVINGLCKDGRLDEA 409
D +T + VI+GLCK G+LDEA
Sbjct: 462 NERSYDLDNVTCNIVIDGLCKSGKLDEA 489
Score = 69.7 bits (169), Expect = 7e-10
Identities = 44/136 (32%), Positives = 66/136 (48%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G + A ++L M G PN N L+ S +EG+ EAERL+++M E G D
Sbjct: 196 YCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPD 255
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
V+ N I LC +GK+ +A I +M L P++ T+
Sbjct: 256 VVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPR-----------------PNITTF 298
Query: 362 STVINGLCKDGRLDEA 409
+ ++ G CK+G L+EA
Sbjct: 299 NLMLEGFCKEGMLEEA 314
Score = 65.9 bits (159), Expect = 1e-08
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 20/155 (12%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGYV----PNTYTCNILLHSLWKEGKVAEAERLLQKMNERGH 172
C GK++EA+++ DM + PN T N++L KEG + EA+ L++ M G+
Sbjct: 267 CSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGN 326
Query: 173 GLDPVSCNIVIDGLCRSGKVDKAVEIVSEMWTHG----------------SAALGNLGNL 304
++ S NI + GL R+GK+ +A + EM G L + +
Sbjct: 327 LMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARM 386
Query: 305 FIGLVDNNGEKCLPDLITYSTVINGLCKDGRLDEA 409
+GL+ ++G PD +TYST+++G C G++ +A
Sbjct: 387 IMGLMISSG--IGPDTVTYSTLLHGCCSTGKVLKA 419
Score = 64.3 bits (155), Expect = 3e-08
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
R+ KV + + DM+ AG P TYT N+L+ L G+ +A + KM +G +
Sbjct: 128 REDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEF 187
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIG-------------LVDNN 328
S I++ G CR+G +A+E++ M + G + N I LV+
Sbjct: 188 SFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERM 247
Query: 329 GEKCL-PDLITYSTVINGLCKDGRLDEA 409
E L PD++T+++ I+ LC G++ EA
Sbjct: 248 REDGLFPDVVTFNSRISALCSAGKILEA 275
>ref|XP_009345921.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Pyrus x bretschneideri]
Length = 874
Score = 217 bits (552), Expect = 3e-54
Identities = 102/138 (73%), Positives = 117/138 (84%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C KGKV EAN +LH+M+ PNT+TCN LLHSLWKEG+ +EAE LL+KMNERG+GLD
Sbjct: 411 FCSKGKVFEANNILHEMMTNNCFPNTHTCNTLLHSLWKEGRTSEAEELLKKMNERGYGLD 470
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLI 355
V+CNIVIDGLC GK+DKA+EIVS MW+HGSAALGNLGN FIGLVD NNG+KC PDLI
Sbjct: 471 TVTCNIVIDGLCNDGKLDKAIEIVSGMWSHGSAALGNLGNSFIGLVDDSNNGKKCSPDLI 530
Query: 356 TYSTVINGLCKDGRLDEA 409
TYST+I GLCK GRLDEA
Sbjct: 531 TYSTIIGGLCKAGRLDEA 548
Score = 75.5 bits (184), Expect = 1e-11
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 14/148 (9%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
RKGK++EA VL +M+ G P+ Y+ NI+++ L K G + +A ++ M D V
Sbjct: 343 RKGKLLEARLVLQEMVDKGIEPSIYSYNIVINGLCKSGMLRDARTVMSLMERNNISPDTV 402
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG-----EKCLP-- 346
+ + ++ G C GKV +A I+ EM T+ + N + + G E+ L
Sbjct: 403 TYSTLLHGFCSKGKVFEANNILHEMMTNNCFPNTHTCNTLLHSLWKEGRTSEAEELLKKM 462
Query: 347 -------DLITYSTVINGLCKDGRLDEA 409
D +T + VI+GLC DG+LD+A
Sbjct: 463 NERGYGLDTVTCNIVIDGLCNDGKLDKA 490
Score = 71.6 bits (174), Expect = 2e-10
Identities = 46/136 (33%), Positives = 73/136 (53%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C++G + EA +L M +AG N + NI L L ++GK+ EA +LQ+M ++G
Sbjct: 306 FCKEGMLEEAEALLKSMEKAGDFINLESYNIWLLGLVRKGKLLEARLVLQEMVDKGIEPS 365
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
S NIVI+GLC+SG + A ++S L++ N PD +TY
Sbjct: 366 IYSYNIVINGLCKSGMLRDARTVMS-------------------LMERN--NISPDTVTY 404
Query: 362 STVINGLCKDGRLDEA 409
ST+++G C G++ EA
Sbjct: 405 STLLHGFCSKGKVFEA 420
Score = 71.2 bits (173), Expect = 2e-10
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G +VL ++ +PN N L+ S K+G+ EAE+L+++M E G D
Sbjct: 196 YCRAGLAGRGLEVLDEVRSCNVLPNKVVYNTLISSFCKQGRTDEAEKLVERMREDGLFPD 255
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKC-LPDLIT 358
V+ N I LC +GK+ +A I +M VD+ G P+++T
Sbjct: 256 AVTFNSRISALCSAGKILEASRIFRDM-----------------CVDDQGLGLPQPNVVT 298
Query: 359 YSTVINGLCKDGRLDEA 409
Y+ ++ G CK+G L+EA
Sbjct: 299 YNLMLQGFCKEGMLEEA 315
Score = 65.1 bits (157), Expect = 2e-08
Identities = 35/121 (28%), Positives = 60/121 (49%)
Frame = +2
Query: 47 DMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSG 226
DMI +G P TYT N+L+ +L + ++ +A + KM ++G + S I++ G CR+G
Sbjct: 141 DMIFSGIKPETYTFNLLIWALCESDRLDDAREMFDKMRDKGCQPNEYSVGILVRGYCRAG 200
Query: 227 KVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITYSTVINGLCKDGRLDE 406
+ +E++ E+ LP+ + Y+T+I+ CK GR DE
Sbjct: 201 LAGRGLEVLDEV---------------------RSCNVLPNKVVYNTLISSFCKQGRTDE 239
Query: 407 A 409
A
Sbjct: 240 A 240
>ref|XP_008382431.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Malus domestica]
Length = 874
Score = 216 bits (550), Expect = 5e-54
Identities = 102/138 (73%), Positives = 117/138 (84%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C KGKVIEAN +LH+M+ PNT+ CN LLHSLWKEG+ +EAE LL+KMNERG+GLD
Sbjct: 411 FCSKGKVIEANNILHEMMXNNCFPNTHXCNTLLHSLWKEGRTSEAEELLKKMNERGYGLD 470
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLI 355
V+CNIVIDGLC+ GK+DKA+EIVS MWTHGSAALGNLGN FIGLVD N G+KC PDLI
Sbjct: 471 TVTCNIVIDGLCKDGKLDKAIEIVSGMWTHGSAALGNLGNSFIGLVDDSNKGKKCSPDLI 530
Query: 356 TYSTVINGLCKDGRLDEA 409
TYST+I GLCK GRLDEA
Sbjct: 531 TYSTIIGGLCKAGRLDEA 548
Score = 75.1 bits (183), Expect = 2e-11
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
RKGK++EA VL +M+ G P+ Y+ NI ++ L K G + +A ++ M + D V
Sbjct: 343 RKGKLLEARLVLQEMVDKGIEPSIYSYNIXINGLCKSGMLRDARXVMSLMERKNISPDTV 402
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMW-------THGSAALGNLGNLFIGLVDNNGEKCLP 346
+ + ++ G C GKV +A I+ EM TH L L +L+ + E+ L
Sbjct: 403 TYSTLLHGFCSKGKVIEANNILHEMMXNNCFPNTHXCNTL--LHSLWKEGRTSEAEELLK 460
Query: 347 ---------DLITYSTVINGLCKDGRLDEA 409
D +T + VI+GLCKDG+LD+A
Sbjct: 461 KMNERGYGLDTVTCNIVIDGLCKDGKLDKA 490
Score = 70.5 bits (171), Expect = 4e-10
Identities = 43/136 (31%), Positives = 69/136 (50%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G +VL ++ PN N L+ S K+G+ EAE+L+++M E G D
Sbjct: 196 YCRAGLAGRGLEVLDEVRSCNVFPNKVVYNTLISSFCKQGRTDEAEKLVERMREDGLFPD 255
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
V+ N I LC +GK+ +A I +M + + +GL P+++TY
Sbjct: 256 AVTFNSRISALCSAGKILEASRIFRDM---------RVDDQGLGLPQ-------PNVVTY 299
Query: 362 STVINGLCKDGRLDEA 409
+ ++ G CK+G L+EA
Sbjct: 300 NLMLQGFCKEGMLEEA 315
Score = 70.1 bits (170), Expect = 6e-10
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 19/154 (12%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGY-----VPNTYTCNILLHSLWKEGKVAEAERLLQKMNERG 169
C GK++EA+++ DM PN T N++L KEG + EAE LL+ M + G
Sbjct: 267 CSAGKILEASRIFRDMRVDDQGLGLPQPNVVTYNLMLQGFCKEGMLEEAEALLKSMEKAG 326
Query: 170 HGLDPVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG------ 331
++ S NI + GL R GK+ +A ++ EM G N+ I + +G
Sbjct: 327 DFINLESYNIWLLGLVRKGKLLEARLVLQEMVDKGIEPSIYSYNIXINGLCKSGMLRDAR 386
Query: 332 --------EKCLPDLITYSTVINGLCKDGRLDEA 409
+ PD +TYST+++G C G++ EA
Sbjct: 387 XVMSLMERKNISPDTVTYSTLLHGFCSKGKVIEA 420
Score = 60.5 bits (145), Expect = 4e-07
Identities = 35/121 (28%), Positives = 61/121 (50%)
Frame = +2
Query: 47 DMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSG 226
DMI +G P T+T N+L+ +L + + +A + KM ++G + S I++ G CR+G
Sbjct: 141 DMIFSGIKPETFTFNLLIWALCESDCLDDAREVFDKMRDKGCQPNEYSVGILVRGYCRAG 200
Query: 227 KVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITYSTVINGLCKDGRLDE 406
+ +E++ E+ N+F P+ + Y+T+I+ CK GR DE
Sbjct: 201 LAGRGLEVLDEV---------RSCNVF------------PNKVVYNTLISSFCKQGRTDE 239
Query: 407 A 409
A
Sbjct: 240 A 240
>gb|KHG06443.1| hypothetical protein F383_04652 [Gossypium arboreum]
Length = 747
Score = 215 bits (548), Expect = 8e-54
Identities = 99/138 (71%), Positives = 120/138 (86%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCRKGK+ EAN +L++M+R G VPNTYTCNILLHSLWKEGK+ EAE LLQKMNE+G+G+D
Sbjct: 284 YCRKGKLSEANAILNEMMRNGCVPNTYTCNILLHSLWKEGKILEAEELLQKMNEKGYGVD 343
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLI 355
V+CNIVIDGLC+SGK+DKA+EI EMWTHGSAALGNLGN FIGLVD + +C+PDL+
Sbjct: 344 TVTCNIVIDGLCKSGKLDKAMEIAHEMWTHGSAALGNLGNSFIGLVDDVSRSMRCIPDLV 403
Query: 356 TYSTVINGLCKDGRLDEA 409
TYS +I+ LCK G++DEA
Sbjct: 404 TYSIIISALCKAGKIDEA 421
Score = 75.5 bits (184), Expect = 1e-11
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
R K++EA VL DM+ G PN Y+ NI++ L K G +++A ++ + G D V
Sbjct: 216 RNAKLVEAQLVLKDMVDKGVEPNIYSYNIVMDGLCKNGMLSDARMVMGFIVRSGLSPDTV 275
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG-----EKCLP-- 346
+ + ++ G CR GK+ +A I++EM +G N+ + + G E+ L
Sbjct: 276 TYSTLLHGYCRKGKLSEANAILNEMMRNGCVPNTYTCNILLHSLWKEGKILEAEELLQKM 335
Query: 347 -------DLITYSTVINGLCKDGRLDEA 409
D +T + VI+GLCK G+LD+A
Sbjct: 336 NEKGYGVDTVTCNIVIDGLCKSGKLDKA 363
Score = 70.1 bits (170), Expect = 6e-10
Identities = 41/136 (30%), Positives = 72/136 (52%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C++G ++EA + M + G + N + NI L L + K+ EA+ +L+ M ++G +
Sbjct: 179 FCKQGMLVEAKAFVESMEKNGDLMNLDSYNIWLLGLLRNAKLVEAQLVLKDMVDKGVEPN 238
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
S NIV+DGLC++G + A + +G + +G PD +TY
Sbjct: 239 IYSYNIVMDGLCKNGMLSDA-------------------RMVMGFIVRSG--LSPDTVTY 277
Query: 362 STVINGLCKDGRLDEA 409
ST+++G C+ G+L EA
Sbjct: 278 STLLHGYCRKGKLSEA 293
Score = 63.5 bits (153), Expect = 5e-08
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMN-ERGHGL 178
+C++GK +A K++ M G P+ T N + +L GKV EA R+ + M + GL
Sbjct: 105 FCKEGKTGDAEKLVERMREDGLFPDVVTFNARISALCSAGKVLEASRIFRDMQIDEALGL 164
Query: 179 ---DPVSCNIVIDGLCRSGKVDKAVEIVSEM--------------WTHGSAALGNLGNLF 307
+ ++ N++++G C+ G + +A V M W G L
Sbjct: 165 PRPNVITYNLMLEGFCKQGMLVEAKAFVESMEKNGDLMNLDSYNIWLLGLLRNAKLVEAQ 224
Query: 308 IGLVDNNGEKCLPDLITYSTVINGLCKDGRLDEA 409
+ L D + P++ +Y+ V++GLCK+G L +A
Sbjct: 225 LVLKDMVDKGVEPNIYSYNIVMDGLCKNGMLSDA 258
Score = 58.5 bits (140), Expect = 2e-06
Identities = 37/107 (34%), Positives = 53/107 (49%)
Frame = +2
Query: 89 NILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSGKVDKAVEIVSEMWT 268
N L+ S KEGK +AE+L+++M E G D V+ N I LC +GKV +A I +M
Sbjct: 99 NTLISSFCKEGKTGDAEKLVERMREDGLFPDVVTFNARISALCSAGKVLEASRIFRDMQI 158
Query: 269 HGSAALGNLGNLFIGLVDNNGEKCLPDLITYSTVINGLCKDGRLDEA 409
+ L P++ITY+ ++ G CK G L EA
Sbjct: 159 DEALGLPR-----------------PNVITYNLMLEGFCKQGMLVEA 188
Score = 57.0 bits (136), Expect = 5e-06
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 37/171 (21%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGY-----------------------VPNTYTCNILLHSLWK 115
C+ GK+ +A ++ H+M G +P+ T +I++ +L K
Sbjct: 355 CKSGKLDKAMEIAHEMWTHGSAALGNLGNSFIGLVDDVSRSMRCIPDLVTYSIIISALCK 414
Query: 116 EGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGS------ 277
GK+ EA++ ++M + D V + I C+ GK+ A ++ +M G
Sbjct: 415 AGKIDEAKKKFREMMGKNLQPDAVIFDTFIHIFCKEGKISSAFRVLKDMEKKGCNKSIQT 474
Query: 278 -----AALGNLGNLF--IGLVDNNGEKCL-PDLITYSTVINGLCKDGRLDE 406
LG+ +F GLVD E+ + P++ Y+ +I LCK+G++ +
Sbjct: 475 YNSLILVLGSKNQIFEIYGLVDEMRERGITPNVCIYNNIIQSLCKNGKIQD 525
>gb|KHG06442.1| hypothetical protein F383_04652 [Gossypium arboreum]
Length = 748
Score = 215 bits (548), Expect = 8e-54
Identities = 99/138 (71%), Positives = 120/138 (86%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCRKGK+ EAN +L++M+R G VPNTYTCNILLHSLWKEGK+ EAE LLQKMNE+G+G+D
Sbjct: 284 YCRKGKLSEANAILNEMMRNGCVPNTYTCNILLHSLWKEGKILEAEELLQKMNEKGYGVD 343
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLI 355
V+CNIVIDGLC+SGK+DKA+EI EMWTHGSAALGNLGN FIGLVD + +C+PDL+
Sbjct: 344 TVTCNIVIDGLCKSGKLDKAMEIAHEMWTHGSAALGNLGNSFIGLVDDVSRSMRCIPDLV 403
Query: 356 TYSTVINGLCKDGRLDEA 409
TYS +I+ LCK G++DEA
Sbjct: 404 TYSIIISALCKAGKIDEA 421
Score = 75.5 bits (184), Expect = 1e-11
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
R K++EA VL DM+ G PN Y+ NI++ L K G +++A ++ + G D V
Sbjct: 216 RNAKLVEAQLVLKDMVDKGVEPNIYSYNIVMDGLCKNGMLSDARMVMGFIVRSGLSPDTV 275
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNG-----EKCLP-- 346
+ + ++ G CR GK+ +A I++EM +G N+ + + G E+ L
Sbjct: 276 TYSTLLHGYCRKGKLSEANAILNEMMRNGCVPNTYTCNILLHSLWKEGKILEAEELLQKM 335
Query: 347 -------DLITYSTVINGLCKDGRLDEA 409
D +T + VI+GLCK G+LD+A
Sbjct: 336 NEKGYGVDTVTCNIVIDGLCKSGKLDKA 363
Score = 70.1 bits (170), Expect = 6e-10
Identities = 41/136 (30%), Positives = 72/136 (52%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C++G ++EA + M + G + N + NI L L + K+ EA+ +L+ M ++G +
Sbjct: 179 FCKQGMLVEAKAFVESMEKNGDLMNLDSYNIWLLGLLRNAKLVEAQLVLKDMVDKGVEPN 238
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
S NIV+DGLC++G + A + +G + +G PD +TY
Sbjct: 239 IYSYNIVMDGLCKNGMLSDA-------------------RMVMGFIVRSG--LSPDTVTY 277
Query: 362 STVINGLCKDGRLDEA 409
ST+++G C+ G+L EA
Sbjct: 278 STLLHGYCRKGKLSEA 293
Score = 63.5 bits (153), Expect = 5e-08
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMN-ERGHGL 178
+C++GK +A K++ M G P+ T N + +L GKV EA R+ + M + GL
Sbjct: 105 FCKEGKTGDAEKLVERMREDGLFPDVVTFNARISALCSAGKVLEASRIFRDMQIDEALGL 164
Query: 179 ---DPVSCNIVIDGLCRSGKVDKAVEIVSEM--------------WTHGSAALGNLGNLF 307
+ ++ N++++G C+ G + +A V M W G L
Sbjct: 165 PRPNVITYNLMLEGFCKQGMLVEAKAFVESMEKNGDLMNLDSYNIWLLGLLRNAKLVEAQ 224
Query: 308 IGLVDNNGEKCLPDLITYSTVINGLCKDGRLDEA 409
+ L D + P++ +Y+ V++GLCK+G L +A
Sbjct: 225 LVLKDMVDKGVEPNIYSYNIVMDGLCKNGMLSDA 258
Score = 58.5 bits (140), Expect = 2e-06
Identities = 37/107 (34%), Positives = 53/107 (49%)
Frame = +2
Query: 89 NILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSGKVDKAVEIVSEMWT 268
N L+ S KEGK +AE+L+++M E G D V+ N I LC +GKV +A I +M
Sbjct: 99 NTLISSFCKEGKTGDAEKLVERMREDGLFPDVVTFNARISALCSAGKVLEASRIFRDMQI 158
Query: 269 HGSAALGNLGNLFIGLVDNNGEKCLPDLITYSTVINGLCKDGRLDEA 409
+ L P++ITY+ ++ G CK G L EA
Sbjct: 159 DEALGLPR-----------------PNVITYNLMLEGFCKQGMLVEA 188
Score = 57.0 bits (136), Expect = 5e-06
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 37/171 (21%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGY-----------------------VPNTYTCNILLHSLWK 115
C+ GK+ +A ++ H+M G +P+ T +I++ +L K
Sbjct: 355 CKSGKLDKAMEIAHEMWTHGSAALGNLGNSFIGLVDDVSRSMRCIPDLVTYSIIISALCK 414
Query: 116 EGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGS------ 277
GK+ EA++ ++M + D V + I C+ GK+ A ++ +M G
Sbjct: 415 AGKIDEAKKKFREMMGKNLQPDAVIFDTFIHIFCKEGKISSAFRVLKDMEKKGCNKSIQT 474
Query: 278 -----AALGNLGNLF--IGLVDNNGEKCL-PDLITYSTVINGLCKDGRLDE 406
LG+ +F GLVD E+ + P++ Y+ +I LCK+G++ +
Sbjct: 475 YNSLILVLGSKNQIFEIYGLVDEMRERGITPNVCIYNNIIQSLCKNGKIQD 525
>ref|XP_007041612.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
[Theobroma cacao] gi|508705547|gb|EOX97443.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 2 [Theobroma cacao]
Length = 632
Score = 215 bits (547), Expect = 1e-53
Identities = 99/138 (71%), Positives = 121/138 (87%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YC KG++ AN +LH+M+R G PNTYTCNILLHSLWKEGK++EAE LLQKMNE+G+G+D
Sbjct: 164 YCCKGRLYAANSILHEMMRNGCFPNTYTCNILLHSLWKEGKISEAEDLLQKMNEKGYGVD 223
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLI 355
V+CNIVIDGLC+SGK+DKA+EI +EMWTHGSAALGNLGN FIGLVD N+ ++C+PDL+
Sbjct: 224 TVTCNIVIDGLCKSGKLDKAMEIGNEMWTHGSAALGNLGNSFIGLVDDANSSKQCIPDLV 283
Query: 356 TYSTVINGLCKDGRLDEA 409
TYS +I+ LCK GRLDEA
Sbjct: 284 TYSIIISALCKAGRLDEA 301
Score = 67.8 bits (164), Expect = 3e-09
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
R K++EA VL DMI G PN Y+ N+++ L K G +++A ++ + G D V
Sbjct: 96 RNAKLVEAQLVLKDMIYKGVEPNIYSYNVVMDGLCKNGMLSDARMVMGFIISSGLSPDTV 155
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFI-------------GLVDNN 328
+ + ++ G C G++ A I+ EM +G N+ + L+
Sbjct: 156 TFSTLLHGYCCKGRLYAANSILHEMMRNGCFPNTYTCNILLHSLWKEGKISEAEDLLQKM 215
Query: 329 GEKCL-PDLITYSTVINGLCKDGRLDEA 409
EK D +T + VI+GLCK G+LD+A
Sbjct: 216 NEKGYGVDTVTCNIVIDGLCKSGKLDKA 243
Score = 65.5 bits (158), Expect = 1e-08
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 20/152 (13%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGYV----PNTYTCNILLHSLWKEGKVAEAERLLQKMNERGH 172
CR GK++EA+++ DM + PN T N++L K+G + EA+ L++ M ++G
Sbjct: 21 CRAGKILEASRIFRDMQMDEELGLPRPNVITYNLMLEGFCKQGMLEEAKTLVESMEKKGD 80
Query: 173 GLDPVSCNIVIDGLCRSGKVDKAVEIVSEMWTHG--------SAALGNL--------GNL 304
++ S NI + GL R+ K+ +A ++ +M G + + L +
Sbjct: 81 LMNLESYNIWLLGLLRNAKLVEAQLVLKDMIYKGVEPNIYSYNVVMDGLCKNGMLSDARM 140
Query: 305 FIGLVDNNGEKCLPDLITYSTVINGLCKDGRL 400
+G + ++G PD +T+ST+++G C GRL
Sbjct: 141 VMGFIISSG--LSPDTVTFSTLLHGYCCKGRL 170
>ref|XP_007041611.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
[Theobroma cacao] gi|508705546|gb|EOX97442.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 1 [Theobroma cacao]
Length = 872
Score = 215 bits (547), Expect = 1e-53
Identities = 99/138 (71%), Positives = 121/138 (87%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YC KG++ AN +LH+M+R G PNTYTCNILLHSLWKEGK++EAE LLQKMNE+G+G+D
Sbjct: 404 YCCKGRLYAANSILHEMMRNGCFPNTYTCNILLHSLWKEGKISEAEDLLQKMNEKGYGVD 463
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLI 355
V+CNIVIDGLC+SGK+DKA+EI +EMWTHGSAALGNLGN FIGLVD N+ ++C+PDL+
Sbjct: 464 TVTCNIVIDGLCKSGKLDKAMEIGNEMWTHGSAALGNLGNSFIGLVDDANSSKQCIPDLV 523
Query: 356 TYSTVINGLCKDGRLDEA 409
TYS +I+ LCK GRLDEA
Sbjct: 524 TYSIIISALCKAGRLDEA 541
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/136 (34%), Positives = 67/136 (49%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
YCR G + ++L DM R PN N L+ S KEGK +AE+L+++M E G D
Sbjct: 190 YCRFGLADKGVELLDDMRRFEIRPNRVVYNTLISSFCKEGKTDDAEKLVERMREDGLFPD 249
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
V+ N I LCR+GK+ +A I +M L P++ITY
Sbjct: 250 VVTFNSRISALCRAGKILEASRIFRDMQMDEELGLPR-----------------PNVITY 292
Query: 362 STVINGLCKDGRLDEA 409
+ ++ G CK G L+EA
Sbjct: 293 NLMLEGFCKQGMLEEA 308
Score = 67.8 bits (164), Expect = 3e-09
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
R K++EA VL DMI G PN Y+ N+++ L K G +++A ++ + G D V
Sbjct: 336 RNAKLVEAQLVLKDMIYKGVEPNIYSYNVVMDGLCKNGMLSDARMVMGFIISSGLSPDTV 395
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFI-------------GLVDNN 328
+ + ++ G C G++ A I+ EM +G N+ + L+
Sbjct: 396 TFSTLLHGYCCKGRLYAANSILHEMMRNGCFPNTYTCNILLHSLWKEGKISEAEDLLQKM 455
Query: 329 GEKCL-PDLITYSTVINGLCKDGRLDEA 409
EK D +T + VI+GLCK G+LD+A
Sbjct: 456 NEKGYGVDTVTCNIVIDGLCKSGKLDKA 483
Score = 66.6 bits (161), Expect = 6e-09
Identities = 38/121 (31%), Positives = 60/121 (49%)
Frame = +2
Query: 47 DMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSG 226
DM+ AG P TYT N+L+ L G + +A L KM+E+G + S I++ G CR G
Sbjct: 135 DMVGAGVSPQTYTFNLLICGLCDLGHLDDARELFDKMSEKGCVPNEFSFGILVRGYCRFG 194
Query: 227 KVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITYSTVINGLCKDGRLDE 406
DK VE++ +M + P+ + Y+T+I+ CK+G+ D+
Sbjct: 195 LADKGVELLDDM---------------------RRFEIRPNRVVYNTLISSFCKEGKTDD 233
Query: 407 A 409
A
Sbjct: 234 A 234
Score = 65.5 bits (158), Expect = 1e-08
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 20/152 (13%)
Frame = +2
Query: 5 CRKGKVIEANKVLHDMIRAGYV----PNTYTCNILLHSLWKEGKVAEAERLLQKMNERGH 172
CR GK++EA+++ DM + PN T N++L K+G + EA+ L++ M ++G
Sbjct: 261 CRAGKILEASRIFRDMQMDEELGLPRPNVITYNLMLEGFCKQGMLEEAKTLVESMEKKGD 320
Query: 173 GLDPVSCNIVIDGLCRSGKVDKAVEIVSEMWTHG--------SAALGNL--------GNL 304
++ S NI + GL R+ K+ +A ++ +M G + + L +
Sbjct: 321 LMNLESYNIWLLGLLRNAKLVEAQLVLKDMIYKGVEPNIYSYNVVMDGLCKNGMLSDARM 380
Query: 305 FIGLVDNNGEKCLPDLITYSTVINGLCKDGRL 400
+G + ++G PD +T+ST+++G C GRL
Sbjct: 381 VMGFIISSG--LSPDTVTFSTLLHGYCCKGRL 410
>ref|XP_008356332.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g17140-like [Malus domestica]
Length = 883
Score = 214 bits (544), Expect = 2e-53
Identities = 99/138 (71%), Positives = 115/138 (83%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
+C KGKV EAN +LH+M+ PNT+TCN LLHSLWKEG+ +EAE +KMNERG+GLD
Sbjct: 405 FCSKGKVFEANNILHEMMTNNCFPNTHTCNTLLHSLWKEGRTSEAEEXXKKMNERGYGLD 464
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVD--NNGEKCLPDLI 355
V+CNIVIDGLC GK+DKA+EIVS MWTHGS ALGN+GN FIGLVD NNG+KC+PDLI
Sbjct: 465 TVTCNIVIDGLCNBGKLDKAIEIVSGMWTHGSVALGNIGNSFIGLVDNSNNGKKCIPDLI 524
Query: 356 TYSTVINGLCKDGRLDEA 409
TYST+I GLCK GRLDEA
Sbjct: 525 TYSTIIGGLCKAGRLDEA 542
Score = 62.0 bits (149), Expect = 2e-07
Identities = 43/136 (31%), Positives = 68/136 (50%)
Frame = +2
Query: 2 YCRKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLD 181
Y R G +VL ++ PN N L+ S K+G+ EAE+L+++M E G LD
Sbjct: 191 YYRAGLAGRGLEVLDEVRSYDVFPNKVVYNTLISSFCKQGRTDEAEKLVERMREDGLFLD 250
Query: 182 PVSCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITY 361
V+ N I LC +GK+ +A I +M+ + + +GL P++ITY
Sbjct: 251 AVTSNSRISALCSAGKILEASRIFRDMY---------IDDQELGLPQ-------PNVITY 294
Query: 362 STVINGLCKDGRLDEA 409
+ ++ G C G L+EA
Sbjct: 295 NLMLQGFC-XGMLEEA 309
Score = 60.8 bits (146), Expect = 3e-07
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Frame = +2
Query: 14 GKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSC 193
G + EA ++ M +AG N + NI L L + GK+ EA LQ+M ++G S
Sbjct: 304 GMLEEAEALIKSMEKAGNFFNLESYNIWLLGLVRNGKLLEAXSTLQEMVDKGXEPTICSY 363
Query: 194 NIVIDGLCRSGKVDKAVEIVSEM--------------WTHGSAALGNL---GNLFIGLVD 322
NIVI+ LC+SG + A ++S M HG + G + N+ ++
Sbjct: 364 NIVINXLCKSGILRDARXVMSLMXRNNIXPHTVMYSTXLHGFCSKGKVFEANNILHEMMT 423
Query: 323 NNGEKCLPDLITYSTVINGLCKDGRLDEA 409
NN C P+ T +T+++ L K+GR EA
Sbjct: 424 NN---CFPNTHTCNTLLHSLWKEGRTSEA 449
Score = 60.5 bits (145), Expect = 4e-07
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Frame = +2
Query: 8 RKGKVIEANKVLHDMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPV 187
R GK++EA L +M+ G P + NI+++ L K G + +A ++ M V
Sbjct: 337 RNGKLLEAXSTLQEMVDKGXEPTICSYNIVINXLCKSGILRDARXVMSLMXRNNIXPHTV 396
Query: 188 SCNIVIDGLCRSGKVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLP------- 346
+ + G C GKV +A I+ EM T+ + N + + G
Sbjct: 397 MYSTXLHGFCSKGKVFEANNILHEMMTNNCFPNTHTCNTLLHSLWKEGRTSEAEEXXKKM 456
Query: 347 -------DLITYSTVINGLCKDGRLDEA 409
D +T + VI+GLC +G+LD+A
Sbjct: 457 NERGYGLDTVTCNIVIDGLCNBGKLDKA 484
Score = 56.6 bits (135), Expect = 6e-06
Identities = 33/121 (27%), Positives = 58/121 (47%)
Frame = +2
Query: 47 DMIRAGYVPNTYTCNILLHSLWKEGKVAEAERLLQKMNERGHGLDPVSCNIVIDGLCRSG 226
DMI +G P TYT N+L+ +L + + +A + KM +G + S I++ G R+G
Sbjct: 136 DMIVSGVKPETYTFNLLIWALCESDXLDDAREVFDKMRGKGCLPNEYSVGILVRGYYRAG 195
Query: 227 KVDKAVEIVSEMWTHGSAALGNLGNLFIGLVDNNGEKCLPDLITYSTVINGLCKDGRLDE 406
+ +E++ E+ ++ P+ + Y+T+I+ CK GR DE
Sbjct: 196 LAGRGLEVLDEVRSY---------------------DVFPNKVVYNTLISSFCKQGRTDE 234
Query: 407 A 409
A
Sbjct: 235 A 235