BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00035770
         (733 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011071821.1| PREDICTED: RNA-dependent RNA polymerase 2 [S...   358   1e-96
gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]   329   9e-88
ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [E...   325   2e-86
ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...   318   2e-84
ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...   318   2e-84
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...   316   1e-83
emb|CDP19325.1| unnamed protein product [Coffea canephora]            308   2e-81
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun...   301   3e-79
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   298   2e-78
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...   297   5e-78
ref|XP_012080102.1| PREDICTED: RNA-dependent RNA polymerase 2 is...   296   8e-78
ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 is...   296   8e-78
ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependen...   296   1e-77
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici...   296   1e-77
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [S...   292   1e-76
ref|XP_010037577.1| PREDICTED: RNA-dependent RNA polymerase 2 [E...   291   2e-76
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2 [C...   289   1e-75
gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sin...   286   9e-75
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   286   9e-75
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th...   278   2e-72

>ref|XP_011071821.1| PREDICTED: RNA-dependent RNA polymerase 2 [Sesamum indicum]
          Length = 1133

 Score =  358 bits (920), Expect = 1e-96
 Identities = 177/244 (72%), Positives = 209/244 (85%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           VRTTDFS++KSIGYLSSLCW+IE+G S+  DIY+ LPYY KDVMEL L  G KF  +S++
Sbjct: 226 VRTTDFSNLKSIGYLSSLCWEIEEGLSSS-DIYSSLPYYSKDVMELTLEGGVKFNHSSDL 284

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VPLVTN+ DFKL YEVLFQL SLVHT KMSLA+VDTDLFQ+L RLD+D+A+L+L KMHKL
Sbjct: 285 VPLVTNYPDFKLPYEVLFQLISLVHTQKMSLAAVDTDLFQILGRLDVDTALLILNKMHKL 344

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
            STC++P SFI +   +  + GK++T+ +  RL +QNVMSCHRVLVTPSKIYC GPELET
Sbjct: 345 HSTCYDPKSFIKNQSSITGQSGKSMTAVASKRLTDQNVMSCHRVLVTPSKIYCMGPELET 404

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SNYIVKNFASYASDFLRVTFVDEDWGRLPA A+S SI++GIFA+P+RTD+Y RILSVLRD
Sbjct: 405 SNYIVKNFASYASDFLRVTFVDEDWGRLPATAVSMSIEQGIFAKPYRTDIYHRILSVLRD 464

Query: 13  GIAI 2
           GI I
Sbjct: 465 GIII 468


>gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
          Length = 972

 Score =  329 bits (844), Expect = 9e-88
 Identities = 164/244 (67%), Positives = 204/244 (83%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           VRTTDFSS+KSIGYLSSLCW+IE+G SN+ D+YT LPYY K+V ELA  E  +F  AS++
Sbjct: 226 VRTTDFSSMKSIGYLSSLCWEIEEGFSNL-DLYTSLPYYTKEVTELAF-EEVQFNHASDL 283

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VP+V N S F++ YEVLFQLNSLVH  K+SLA+V+TDLFQ+LSRLD+D+A+L+L++MHKL
Sbjct: 284 VPIVKNDSVFQVAYEVLFQLNSLVHCQKLSLAAVNTDLFQILSRLDMDTALLILKEMHKL 343

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
            STC+EP SF+ +   +   + KNL SA   RL+  N+MSCHRVLVTP+KI+C GPELE+
Sbjct: 344 HSTCYEPKSFVENQPSITTHNRKNLPSAE--RLIEHNIMSCHRVLVTPTKIFCLGPELES 401

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SNYIVKNFA YASDF+RVTFVDEDWGRL  GA+STSI +GIFA+P+RTD+Y RILSVL+D
Sbjct: 402 SNYIVKNFADYASDFMRVTFVDEDWGRLSPGAVSTSIMKGIFAKPYRTDIYRRILSVLQD 461

Query: 13  GIAI 2
           G+ I
Sbjct: 462 GLVI 465


>ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [Erythranthe guttatus]
           gi|604343689|gb|EYU42543.1| hypothetical protein
           MIMGU_mgv1a000463mg [Erythranthe guttata]
          Length = 1135

 Score =  325 bits (832), Expect = 2e-86
 Identities = 161/246 (65%), Positives = 202/246 (82%), Gaps = 2/246 (0%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSA--S 560
           VRTTDFS VKSIGYLSSLCW+I++G S++ D YT LP + KDV+EL L +G +F +A  S
Sbjct: 221 VRTTDFSKVKSIGYLSSLCWEIKEGFSSL-DAYTSLPCFSKDVIELYLEDGARFNNAPSS 279

Query: 559 NMVPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMH 380
           ++VP++ N  DF++ YEVLFQ+NSLVHT KMSLASVD +LFQ LS LD+D A+L+L KMH
Sbjct: 280 DLVPIIPNCPDFRVPYEVLFQINSLVHTQKMSLASVDNNLFQTLSELDMDRALLILAKMH 339

Query: 379 KLESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPEL 200
           KL STC+EP SFI +   +   + KNL S S+ RL + NVMSCHR+LVTPS+I+C GPEL
Sbjct: 340 KLHSTCYEPKSFIETRSSMSIHNVKNLPSESFKRLKDHNVMSCHRILVTPSRIFCVGPEL 399

Query: 199 ETSNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVL 20
           E+SNYIVKNFAS+ASDF+RVTFVDEDWGR+ A ++STSI RGIF++P+RTD+Y RILS+L
Sbjct: 400 ESSNYIVKNFASHASDFVRVTFVDEDWGRISANSVSTSINRGIFSKPYRTDIYRRILSIL 459

Query: 19  RDGIAI 2
           RDGI I
Sbjct: 460 RDGIVI 465


>ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris]
          Length = 1120

 Score =  318 bits (816), Expect = 2e-84
 Identities = 158/244 (64%), Positives = 197/244 (80%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           VRTTDFS++KSIG  SSLCW+IE G  N  D+ + LPY   DVM+L L E     SAS +
Sbjct: 217 VRTTDFSAMKSIGCSSSLCWEIEDGLLNS-DLLSSLPYCNNDVMDLVLDEVGDIYSASEL 275

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VPL +  SD KL YE+LFQLNSLVH+HK+SL +V TDL +VLS+L++D+A+++LQKMHKL
Sbjct: 276 VPLASFPSDLKLPYEILFQLNSLVHSHKISLGAVKTDLIEVLSKLELDTAMMILQKMHKL 335

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
           +STCFEPV FI +  HV+ K  KN  S+SY+RL+NQN+MS HRVLVTPSK+YC GPELET
Sbjct: 336 QSTCFEPVPFIKTRLHVLGKTSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGPELET 395

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SNYIVKNFAS+ASDFLRVTFV+EDW +L   AIS S+++GIFA+P+RT +Y RILS+LRD
Sbjct: 396 SNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSILRD 455

Query: 13  GIAI 2
           G+ I
Sbjct: 456 GLDI 459


>ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana
           tomentosiformis]
          Length = 1120

 Score =  318 bits (815), Expect = 2e-84
 Identities = 157/244 (64%), Positives = 198/244 (81%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           VRTTDFS++KSIG  SSLCW+IE G  +  D+ + LPY   DVM+L L E     SAS +
Sbjct: 217 VRTTDFSAMKSIGCSSSLCWEIEDGLLSS-DLLSSLPYCNNDVMDLVLDEVGDIYSASEL 275

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VPL +  SD KL YE+LFQLNSLVHTHK+SL +V TDL +VLS+L++D+A+++LQKMHKL
Sbjct: 276 VPLASFPSDLKLPYEILFQLNSLVHTHKISLGAVKTDLIEVLSKLELDTAMMILQKMHKL 335

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
           +S+CFEPV FI +  HV+ K+ KN  S+SY+RL+NQN+MS HRVLVTPSK+YC GPELET
Sbjct: 336 QSSCFEPVPFIKTRLHVLGKNSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGPELET 395

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SNYIVKNFAS+ASDFLRVTFV+EDW +L   AIS S+++GIFA+P+RT +Y RILS+LRD
Sbjct: 396 SNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISISVEQGIFAKPYRTKIYHRILSILRD 455

Query: 13  GIAI 2
           G+ I
Sbjct: 456 GLVI 459


>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score =  316 bits (809), Expect = 1e-83
 Identities = 156/244 (63%), Positives = 197/244 (80%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           VRTTDFS++KSIG  SS CW+IE G  +  D+ + LPY   DVM+L L E     SAS +
Sbjct: 217 VRTTDFSAMKSIGCSSSPCWEIEDGLLSS-DLLSGLPYCNNDVMDLVLDEVGDIYSASEL 275

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VPL +  SD KL YE+LFQLNSL+HTHK+SL +V TDL +VLS+L++D+A+++LQKMHKL
Sbjct: 276 VPLASFPSDLKLPYEILFQLNSLIHTHKISLGAVKTDLIEVLSKLELDTAMMILQKMHKL 335

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
           +STCFEPV FI +  HV+ K+ KN  S+SY+RL+NQN+MS HRVLVTPSK+YC GPELET
Sbjct: 336 QSTCFEPVPFIKTRLHVLGKNSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGPELET 395

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SNYIVKNFA +ASDFLRVTFV+EDWG+L   AIS S+++GIFA+P+RT +Y RILS+LRD
Sbjct: 396 SNYIVKNFALHASDFLRVTFVEEDWGKLSPNAISMSVEQGIFAKPYRTKIYHRILSILRD 455

Query: 13  GIAI 2
           G+ I
Sbjct: 456 GLVI 459


>emb|CDP19325.1| unnamed protein product [Coffea canephora]
          Length = 1120

 Score =  308 bits (790), Expect = 2e-81
 Identities = 150/244 (61%), Positives = 195/244 (79%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           VRTTDFSS+KSIGY SSLC +IE+G S + D++T LPY  +  +EL L EG++F + S +
Sbjct: 217 VRTTDFSSIKSIGYSSSLCLEIEEGLSGL-DLFTNLPYCSRFFLELTLEEGEQFSTTSEL 275

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VPLV   SD K+ YE+LFQLNSLVHT K+SL +V+++L +VLS LD+D A+ +LQKMHKL
Sbjct: 276 VPLVKCCSDIKITYEILFQLNSLVHTQKLSLGAVNSELMEVLSGLDMDIAMPILQKMHKL 335

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
           E+ C++PVSFI    HV+ ++  NL S+SY R  N N+M+CHRVLVTPSK+YC GPELET
Sbjct: 336 ETMCYDPVSFINKRLHVMGENASNLRSSSYGRPKNNNMMTCHRVLVTPSKVYCLGPELET 395

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SNYIVKNFASYASDFLRVTFV+EDWG+L    ++TS  RG+FA+ ++T++Y RILS+L+D
Sbjct: 396 SNYIVKNFASYASDFLRVTFVEEDWGKLSPSVVNTSFGRGLFAKNYKTNIYHRILSILKD 455

Query: 13  GIAI 2
           GI I
Sbjct: 456 GIVI 459


>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
           gi|462407047|gb|EMJ12511.1| hypothetical protein
           PRUPE_ppa000513mg [Prunus persica]
          Length = 1118

 Score =  301 bits (771), Expect = 3e-79
 Identities = 148/245 (60%), Positives = 192/245 (78%), Gaps = 1/245 (0%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYK-KDVMELALIEGKKFRSASN 557
           VRTTDFS +KSIGY +S CW+IE+  S V D++ C PYYK  DV++L L  G+K+ S S 
Sbjct: 215 VRTTDFSDMKSIGYSTSFCWEIEEEFS-VSDVFECFPYYKDNDVVDLILDNGEKYCSPSE 273

Query: 556 MVPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHK 377
            VPLV   SD KL YE+LFQLN+LVH+ K+SLA+ D+DL + LS L +D+  ++L+K+HK
Sbjct: 274 TVPLVKCRSDSKLPYEILFQLNALVHSQKISLAATDSDLIEFLSGLSVDTTNVLLEKLHK 333

Query: 376 LESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELE 197
            ++TC++P+SF+    HV+ ++ K+  S  Y RLM  NVMSCHRVL+TPSKI C GPELE
Sbjct: 334 RKTTCYDPLSFLKMQLHVLERNHKSRPSP-YKRLMEHNVMSCHRVLITPSKICCLGPELE 392

Query: 196 TSNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLR 17
            SNY+VKNFA+YASDF+RVTFVDEDW +LPA AISTSI++GIFA+PHRT +Y R+LS+LR
Sbjct: 393 KSNYVVKNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHRMLSILR 452

Query: 16  DGIAI 2
           DGI I
Sbjct: 453 DGIVI 457


>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
          Length = 1119

 Score =  298 bits (763), Expect = 2e-78
 Identities = 149/244 (61%), Positives = 193/244 (79%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           VRTTDFS++KSIG  SSLCW+ E G  +  D+ + LP   KDV++L L +     S S  
Sbjct: 216 VRTTDFSNIKSIGCSSSLCWETEDGWLSS-DLLSSLPCCNKDVIDLDLDKVGDIYSGSEF 274

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VPLV   SD KL YE+LFQLNSLV T K+SL +V+ DL +VLS+L++D+A+++LQKMHKL
Sbjct: 275 VPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAVNPDLIEVLSKLELDTAMMILQKMHKL 334

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
           +STCFEP++FI +  HV+ K+ KN  S+SY+RL+N ++MS HRVLVTPSKIYC GPELET
Sbjct: 335 QSTCFEPLTFIKTRLHVLGKNNKNQLSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPELET 394

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SNYIVKNFA +ASDFLRVTFV+EDWG+L   A+S S+++GIFA+P+RT +Y RILS+LR+
Sbjct: 395 SNYIVKNFAEHASDFLRVTFVEEDWGKLFPNAVSMSVEQGIFAKPYRTKIYHRILSILRE 454

Query: 13  GIAI 2
           GI I
Sbjct: 455 GIVI 458


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
           gi|297733815|emb|CBI15062.3| unnamed protein product
           [Vitis vinifera]
          Length = 1127

 Score =  297 bits (760), Expect = 5e-78
 Identities = 143/244 (58%), Positives = 194/244 (79%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           +RTTDFSS+KS+G  +S CW+I++G    +DI+   PYYK D+ EL L +G+ F S S +
Sbjct: 215 LRTTDFSSIKSLGQSTSFCWEIKEGFP-ALDIFASFPYYK-DLTELTLEQGEGFCSDSGL 272

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VPLV   S  KL YE+LFQLNSLVH  K+SLA+VDTDL ++LS L +D+A+++LQK+HK 
Sbjct: 273 VPLVKCESGPKLAYEILFQLNSLVHAQKISLAAVDTDLIEILSNLPVDTAIMILQKLHKR 332

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
           +ST ++P+SFI +  H+IN + KNL  +S++RL N NVMSCHRVLVTPSKIYC GPELE+
Sbjct: 333 KSTRYDPISFIKAQAHIINMNIKNLPPSSHSRLTNNNVMSCHRVLVTPSKIYCLGPELES 392

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SNY+VK++A+YASDF+RV+FV+EDW +LP+ A+S SI++  FA P RT++Y RILS+LR+
Sbjct: 393 SNYVVKHYAAYASDFVRVSFVEEDWSKLPSNALSMSIRKAFFADPFRTEIYHRILSILRE 452

Query: 13  GIAI 2
           GI I
Sbjct: 453 GIVI 456


>ref|XP_012080102.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X2 [Jatropha
           curcas]
          Length = 940

 Score =  296 bits (758), Expect = 8e-78
 Identities = 147/245 (60%), Positives = 185/245 (75%), Gaps = 1/245 (0%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRS-ASN 557
           VRT DFSSVKSIG  +S CW++E+G  +  DI+T  PYY +D  ++ L +G+KF    S 
Sbjct: 37  VRTADFSSVKSIGKSTSFCWEVEEGL-DASDIFTSFPYYVEDRRDIVLEDGEKFHPITSE 95

Query: 556 MVPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHK 377
           MVPL    SD KL YE+ FQLNSLVHTHK+SLA+VDTDLF++L  L ID+A+ +LQK+HK
Sbjct: 96  MVPLAGYESDSKLAYEIFFQLNSLVHTHKISLAAVDTDLFKILGSLTIDTAMAILQKLHK 155

Query: 376 LESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELE 197
           L  TC++PVSF+    H   ++ K   S+S     + N+M CHR L+TPSKIYC GPELE
Sbjct: 156 LTFTCYDPVSFVKKQLHAPRRNLKK-PSSSQKSSTDHNIMICHRALITPSKIYCLGPELE 214

Query: 196 TSNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLR 17
           +SNY+VKNFASYASDF+RVTFV+EDW +LP  AISTSI+ GIFA+P RT +Y+RILSVLR
Sbjct: 215 SSNYVVKNFASYASDFMRVTFVEEDWSKLPVNAISTSIQHGIFAKPFRTKIYERILSVLR 274

Query: 16  DGIAI 2
           DGI I
Sbjct: 275 DGIVI 279


>ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Jatropha
           curcas] gi|643720862|gb|KDP31126.1| hypothetical protein
           JCGZ_11502 [Jatropha curcas]
          Length = 1122

 Score =  296 bits (758), Expect = 8e-78
 Identities = 147/245 (60%), Positives = 185/245 (75%), Gaps = 1/245 (0%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRS-ASN 557
           VRT DFSSVKSIG  +S CW++E+G  +  DI+T  PYY +D  ++ L +G+KF    S 
Sbjct: 219 VRTADFSSVKSIGKSTSFCWEVEEGL-DASDIFTSFPYYVEDRRDIVLEDGEKFHPITSE 277

Query: 556 MVPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHK 377
           MVPL    SD KL YE+ FQLNSLVHTHK+SLA+VDTDLF++L  L ID+A+ +LQK+HK
Sbjct: 278 MVPLAGYESDSKLAYEIFFQLNSLVHTHKISLAAVDTDLFKILGSLTIDTAMAILQKLHK 337

Query: 376 LESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELE 197
           L  TC++PVSF+    H   ++ K   S+S     + N+M CHR L+TPSKIYC GPELE
Sbjct: 338 LTFTCYDPVSFVKKQLHAPRRNLKK-PSSSQKSSTDHNIMICHRALITPSKIYCLGPELE 396

Query: 196 TSNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLR 17
           +SNY+VKNFASYASDF+RVTFV+EDW +LP  AISTSI+ GIFA+P RT +Y+RILSVLR
Sbjct: 397 SSNYVVKNFASYASDFMRVTFVEEDWSKLPVNAISTSIQHGIFAKPFRTKIYERILSVLR 456

Query: 16  DGIAI 2
           DGI I
Sbjct: 457 DGIVI 461


>ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 2
           [Prunus mume]
          Length = 1100

 Score =  296 bits (757), Expect = 1e-77
 Identities = 146/245 (59%), Positives = 190/245 (77%), Gaps = 1/245 (0%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYK-KDVMELALIEGKKFRSASN 557
           VRTTDFS +KSIGY +S CW+IE+  S + D++ C PYYK  DV++L L  G+K+ S S 
Sbjct: 197 VRTTDFSDMKSIGYSTSFCWEIEEEFS-LSDVFECFPYYKDNDVVDLILDNGEKYCSPSE 255

Query: 556 MVPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHK 377
            VPLV   SD KL YE+LFQLN+LVH+ K+SLA+ D+DL + LS L +D+  ++L+K+HK
Sbjct: 256 TVPLVKCGSDSKLPYEILFQLNALVHSQKISLAATDSDLIEFLSGLSVDTTNVLLEKLHK 315

Query: 376 LESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELE 197
            ++TC++P SF+    HV+ ++ K+  S  Y RL   NVMSCHRVL+TPSKI C GPELE
Sbjct: 316 RKTTCYDPQSFLKMQLHVLERNHKSRPSP-YKRLTEHNVMSCHRVLITPSKICCLGPELE 374

Query: 196 TSNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLR 17
            SNY+VKNFA+YASDF+RVTFVDEDW +LPA AISTSI++GIFA+PHRT +Y R+LS+LR
Sbjct: 375 KSNYVVKNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHRMLSILR 434

Query: 16  DGIAI 2
           DGI I
Sbjct: 435 DGIVI 439


>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223550546|gb|EEF52033.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 983

 Score =  296 bits (757), Expect = 1e-77
 Identities = 147/244 (60%), Positives = 186/244 (76%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           VRTTDFSSVKS+G  +S CW+IE+G     DI+   PYY +   E+ L +G+++ SAS +
Sbjct: 64  VRTTDFSSVKSVGQSTSFCWEIEEGLE-ASDIFKSFPYYTEAREEVILEDGEEWGSASEI 122

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VPLV   SD KL YE+LFQLNSLVHT K+SLA+VDT+L   L  L ID+A ++LQK+HKL
Sbjct: 123 VPLVKCGSDSKLPYEILFQLNSLVHTQKISLAAVDTNLITTLGSLTIDTATMILQKLHKL 182

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
             TC++P++FI    HV  ++ K    +S   L+N N+MSCHR L+TPSKIYC GPELE+
Sbjct: 183 AVTCYDPLAFIKKQLHVPGRNLKRPFFSSSKNLVNHNIMSCHRALITPSKIYCLGPELES 242

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SNY+VKNFASYASDF+RVTFV+EDW +LPA AIS SI+RGIFA+P RT +Y RILS+LRD
Sbjct: 243 SNYVVKNFASYASDFMRVTFVEEDWSKLPANAISMSIQRGIFAKPFRTGIYHRILSILRD 302

Query: 13  GIAI 2
           GI I
Sbjct: 303 GIVI 306


>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [Solanum lycopersicum]
          Length = 1119

 Score =  292 bits (748), Expect = 1e-76
 Identities = 144/244 (59%), Positives = 193/244 (79%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           +RTTDFS++KSIG  SSLCW+ E G  +  D+++ LP   +DV++L L +     S S  
Sbjct: 216 IRTTDFSNIKSIGCSSSLCWETEDGWLSS-DLFSSLPCCNQDVIDLDLDKVGDIYSGSEF 274

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VPLV   SD KL YE+LFQLNSLV T K+SL +++ +L +VLS+L++D+A+++LQKMHKL
Sbjct: 275 VPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAINPNLIEVLSKLELDTAMMILQKMHKL 334

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
           +S CF+P+ FI +  HV+ K+ KN  S+SY+RL+N ++MS HRVLVTPSKIYC GPELET
Sbjct: 335 QSICFDPLLFIKTRLHVLGKNNKNRPSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPELET 394

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SNYIVKNFAS+ASDFLRVTFV+EDWG+L   A+S S+++GIFA+P+RT +Y RILS+LR+
Sbjct: 395 SNYIVKNFASHASDFLRVTFVEEDWGKLFPNAVSMSVEQGIFAKPYRTKIYHRILSILRE 454

Query: 13  GIAI 2
           GI I
Sbjct: 455 GIVI 458


>ref|XP_010037577.1| PREDICTED: RNA-dependent RNA polymerase 2 [Eucalyptus grandis]
           gi|629082860|gb|KCW49305.1| hypothetical protein
           EUGRSUZ_K02861 [Eucalyptus grandis]
          Length = 1130

 Score =  291 bits (746), Expect = 2e-76
 Identities = 139/245 (56%), Positives = 190/245 (77%), Gaps = 1/245 (0%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSS-NVVDIYTCLPYYKKDVMELALIEGKKFRSASN 557
           VRTTDFS+VK+IG  ++ CW++++G      D++   PYYK+  ++L L EG++F SAS 
Sbjct: 227 VRTTDFSNVKAIGQSTTFCWEVDEGLQVPASDVFASFPYYKEGTIDLTLEEGEEFHSASE 286

Query: 556 MVPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHK 377
           +VPL+   S  KL YE++FQLNSLVHT K+SLA    +L  +LS LD+D+AVLVLQK+HK
Sbjct: 287 IVPLLECDSGPKLDYEIVFQLNSLVHTQKISLAGA-YELTNILSTLDVDTAVLVLQKLHK 345

Query: 376 LESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELE 197
           L STC++PV F+ +  HV+ +DGKNL S++  RL + NVM CHR  +TP+KIYC GPELE
Sbjct: 346 LTSTCYDPVPFVKTQLHVLKRDGKNLPSSALRRLTDSNVMFCHRAFITPTKIYCLGPELE 405

Query: 196 TSNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLR 17
           TSNY+VKNFAS++SDFLRV+FV+EDW ++P  A+STS ++GIF++P RT +Y RIL+VLR
Sbjct: 406 TSNYVVKNFASHSSDFLRVSFVEEDWSKIPPNALSTSTQQGIFSKPLRTGIYHRILTVLR 465

Query: 16  DGIAI 2
           +GI I
Sbjct: 466 EGIVI 470


>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cicer arietinum]
          Length = 1122

 Score =  289 bits (739), Expect = 1e-75
 Identities = 134/244 (54%), Positives = 190/244 (77%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           VRTTDFS +KSIG+ +S CW+IE+ SS+  D++   P Y++++ +L+L +G++F S +  
Sbjct: 217 VRTTDFSRLKSIGHSTSFCWEIEEESSDS-DVFRSFPLYRENLKDLSLEDGEEFCSPTET 275

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VPLV    D KL YE LFQLNSLVHT K+SLASVD +L  +++ LD ++  ++ QK+HK+
Sbjct: 276 VPLVKCRLDTKLPYEALFQLNSLVHTQKISLASVDDELIDLIASLDDETKAVIFQKLHKM 335

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
            STC+EP+ F+ +  HV++   K+L  +S  RL + N+MSCHR L+TPSKIYC GPELET
Sbjct: 336 SSTCYEPLRFVKTQLHVLSIKKKSLRPSSQKRLADNNIMSCHRALITPSKIYCLGPELET 395

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SN++VK+FASYASDF+R+TFV+EDW +LP  A+STS+++GIFA+P RTD+Y R+L++LRD
Sbjct: 396 SNHVVKHFASYASDFMRITFVEEDWSKLPINAVSTSLQKGIFAKPFRTDIYKRVLTILRD 455

Query: 13  GIAI 2
           GI I
Sbjct: 456 GIVI 459


>gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sinensis]
          Length = 1131

 Score =  286 bits (732), Expect = 9e-75
 Identities = 138/244 (56%), Positives = 187/244 (76%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           VRTTDFS  KSIG  +S  W+I+ G     DI    P+YK+D  +L L EG++F + S +
Sbjct: 230 VRTTDFSVTKSIGCSTSFFWEIKNGLL-ASDISNIFPFYKEDKTDLILEEGEEFCTTSEI 288

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VPLV     F L +EVLFQLNSLVH  K+SL + D +L Q+LS L +++A++VLQK+HKL
Sbjct: 289 VPLVKCRPGFNLSHEVLFQLNSLVHNQKVSLVAADAELIQILSGLSMETALMVLQKLHKL 348

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
           +S C++PVSF+ +  HV+ ++ K++  +S+ RL++ NVMSC+R LVTP KIYC GPELET
Sbjct: 349 KSICYDPVSFVKTQLHVLGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGPELET 408

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SNY+VKNFA YASDF+RVTFV+EDW +LPA A+STSI+RGIF++P+RT +Y RIL++L+D
Sbjct: 409 SNYVVKNFAKYASDFMRVTFVEEDWSKLPANALSTSIQRGIFSKPYRTKIYSRILTILQD 468

Query: 13  GIAI 2
           GI I
Sbjct: 469 GIVI 472


>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
          Length = 1131

 Score =  286 bits (732), Expect = 9e-75
 Identities = 138/244 (56%), Positives = 187/244 (76%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           VRTTDFS  KSIG  +S  W+I+ G     DI    P+YK+D  +L L EG++F + S +
Sbjct: 230 VRTTDFSVTKSIGCSTSFFWEIKNGLL-ASDISNIFPFYKEDKTDLILEEGEEFCTTSEI 288

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VPLV     F L +EVLFQLNSLVH  K+SL + D +L Q+L+ L +++A++VLQK+HKL
Sbjct: 289 VPLVKCRPGFNLSHEVLFQLNSLVHNQKVSLVAADAELIQILNGLSMETALMVLQKLHKL 348

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
           +S C++PVSF+ +  HV+ ++ K++  +S+ RL++ NVMSC+R LVTP KIYC GPELET
Sbjct: 349 KSICYDPVSFVKTQLHVLGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGPELET 408

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SNY+VKNFA YASDF+RVTFV+EDW +LPA A+STSI+RGIFA+P+RT +Y RIL++L+D
Sbjct: 409 SNYVVKNFAKYASDFMRVTFVEEDWSKLPANALSTSIQRGIFAKPYRTKIYSRILTILQD 468

Query: 13  GIAI 2
           GI I
Sbjct: 469 GIVI 472


>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
           gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
           polymerase 2 isoform 1 [Theobroma cacao]
           gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
           2 isoform 1 [Theobroma cacao]
           gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
           2 isoform 1 [Theobroma cacao]
          Length = 1149

 Score =  278 bits (711), Expect = 2e-72
 Identities = 137/244 (56%), Positives = 182/244 (74%)
 Frame = -1

Query: 733 VRTTDFSSVKSIGYLSSLCWKIEQGSSNVVDIYTCLPYYKKDVMELALIEGKKFRSASNM 554
           VRTTDFS  K++G  ++  W+I       +D+++C   Y++D+  L L  G +F SA  +
Sbjct: 222 VRTTDFSRTKAVGQSTAFYWEIN-AELLTLDLFSCFSCYREDMKGLTLKGGGEFSSAPEI 280

Query: 553 VPLVTNHSDFKLGYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKL 374
           VPLV   SD KL YE+LFQLNSLVHT K+S+ASVDTDL  +L  L +++AV++LQK HKL
Sbjct: 281 VPLVKGPSDSKLAYEILFQLNSLVHTQKISIASVDTDLIDILRVLAVETAVMILQKFHKL 340

Query: 373 ESTCFEPVSFITSHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELET 194
            STC+ PVSF+  +  V  ++ ++   +S+ RL++ NVMSCHR LVTPSKIYC GPELET
Sbjct: 341 LSTCYNPVSFVKENLPVSERNFQSRPLSSFKRLIDHNVMSCHRALVTPSKIYCLGPELET 400

Query: 193 SNYIVKNFASYASDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRD 14
           SNY+VKNFA YASDF+RV+FV+EDWG+L A AISTS++ GIF++P RT +Y RILSVL+ 
Sbjct: 401 SNYVVKNFAEYASDFMRVSFVEEDWGKLSANAISTSVQLGIFSKPFRTKIYHRILSVLQH 460

Query: 13  GIAI 2
           GI I
Sbjct: 461 GIVI 464