BLASTX nr result
ID: Forsythia23_contig00035673
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00035673
(481 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009334115.1| PREDICTED: zinc finger CCCH domain-containin... 65 2e-08
ref|XP_008365380.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 65 2e-08
ref|XP_008230555.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 64 4e-08
ref|XP_007217064.1| hypothetical protein PRUPE_ppa001047mg [Prun... 64 4e-08
ref|XP_009377178.1| PREDICTED: zinc finger CCCH domain-containin... 61 3e-07
ref|XP_008341424.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 61 3e-07
gb|KDO55177.1| hypothetical protein CISIN_1g040778mg [Citrus sin... 60 6e-07
ref|XP_006470267.1| PREDICTED: zinc finger CCCH domain-containin... 60 6e-07
ref|XP_006446567.1| hypothetical protein CICLE_v10014173mg [Citr... 60 6e-07
ref|XP_012081373.1| PREDICTED: zinc finger CCCH domain-containin... 59 2e-06
ref|XP_010108813.1| Zinc finger CCCH domain-containing protein 4... 58 2e-06
emb|CBI34878.3| unnamed protein product [Vitis vinifera] 58 3e-06
ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin... 58 3e-06
ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis] ... 57 6e-06
>ref|XP_009334115.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Pyrus x bretschneideri]
Length = 939
Score = 65.1 bits (157), Expect = 2e-08
Identities = 37/73 (50%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = -2
Query: 216 SPKNLRYKYSMELKVSSPKPG-LSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRS 40
S ++ ++ SMELKVSSPKPG LSPSDC+ RNHKHR+++TRS
Sbjct: 2 SQLSIDFEGSMELKVSSPKPGCLSPSDCISDPEEKELSDDDDDD----RNHKHRRRDTRS 57
Query: 39 HSLERDALDQVFT 1
SLE D LDQV T
Sbjct: 58 QSLETDTLDQVIT 70
>ref|XP_008365380.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 41-like [Malus domestica]
Length = 942
Score = 65.1 bits (157), Expect = 2e-08
Identities = 37/73 (50%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = -2
Query: 216 SPKNLRYKYSMELKVSSPKPG-LSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRS 40
S ++ ++ SMELKVSSPKPG LSPSDC+ RNHKHR+++TRS
Sbjct: 2 SQLSIDFEGSMELKVSSPKPGGLSPSDCISDPEEKELSDDDDDD----RNHKHRRRDTRS 57
Query: 39 HSLERDALDQVFT 1
SLE D LDQV T
Sbjct: 58 QSLETDTLDQVIT 70
>ref|XP_008230555.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 41 [Prunus mume]
Length = 913
Score = 63.9 bits (154), Expect = 4e-08
Identities = 36/61 (59%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = -2
Query: 186 MELKVSSPKPG-LSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERDALDQ 10
MELKVSSPKPG LSPSDC+ RNHKHR++ETRS SLERD LDQ
Sbjct: 1 MELKVSSPKPGGLSPSDCISDPEEKEVSDDDDDD----RNHKHRRRETRSQSLERDTLDQ 56
Query: 9 V 7
V
Sbjct: 57 V 57
>ref|XP_007217064.1| hypothetical protein PRUPE_ppa001047mg [Prunus persica]
gi|462413214|gb|EMJ18263.1| hypothetical protein
PRUPE_ppa001047mg [Prunus persica]
Length = 924
Score = 63.9 bits (154), Expect = 4e-08
Identities = 36/61 (59%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = -2
Query: 186 MELKVSSPKPG-LSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERDALDQ 10
MELKVSSPKPG LSPSDC+ RNHKHR++ETRS SLERD LDQ
Sbjct: 1 MELKVSSPKPGGLSPSDCISDPEEKEVSDDDDDD----RNHKHRRRETRSQSLERDTLDQ 56
Query: 9 V 7
V
Sbjct: 57 V 57
>ref|XP_009377178.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Pyrus x bretschneideri]
gi|694404613|ref|XP_009377179.1| PREDICTED: zinc finger
CCCH domain-containing protein 41-like [Pyrus x
bretschneideri] gi|694404616|ref|XP_009377180.1|
PREDICTED: zinc finger CCCH domain-containing protein
41-like [Pyrus x bretschneideri]
Length = 941
Score = 61.2 bits (147), Expect = 3e-07
Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = -2
Query: 216 SPKNLRYKYSMELKVSSPKPG-LSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRS 40
S ++ ++ SMELKVSSPKPG LSPSDC DRNHKHR+++TRS
Sbjct: 2 SQRSSDFEGSMELKVSSPKPGGLSPSDC----SSDPEEKEVSDDDDDDRNHKHRRRDTRS 57
Query: 39 HSLERDALDQVFT 1
S ERD DQV T
Sbjct: 58 QSSERDTFDQVTT 70
>ref|XP_008341424.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 41 [Malus domestica]
Length = 941
Score = 61.2 bits (147), Expect = 3e-07
Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = -2
Query: 216 SPKNLRYKYSMELKVSSPKPG-LSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRS 40
S ++ ++ SMELKVSSPKPG LSPSDC DRNHKHR+++TRS
Sbjct: 2 SQRSSDFEGSMELKVSSPKPGGLSPSDC----SNDPEEKEVSDDDDDDRNHKHRRRDTRS 57
Query: 39 HSLERDALDQVFT 1
S ERD DQV T
Sbjct: 58 QSSERDTFDQVTT 70
>gb|KDO55177.1| hypothetical protein CISIN_1g040778mg [Citrus sinensis]
Length = 262
Score = 60.1 bits (144), Expect = 6e-07
Identities = 34/62 (54%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = -2
Query: 186 MELKVSSPKPG-LSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERDALDQ 10
MELKVSSPKP LSP DC RNHKHR++ETRS SLERD+LDQ
Sbjct: 1 MELKVSSPKPASLSPPDCTSDPEEKELSDEDDDD----RNHKHRRRETRSQSLERDSLDQ 56
Query: 9 VF 4
V+
Sbjct: 57 VY 58
>ref|XP_006470267.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
isoform X1 [Citrus sinensis]
gi|568832073|ref|XP_006470268.1| PREDICTED: zinc finger
CCCH domain-containing protein 41-like isoform X2
[Citrus sinensis] gi|568832075|ref|XP_006470269.1|
PREDICTED: zinc finger CCCH domain-containing protein
41-like isoform X3 [Citrus sinensis]
gi|568832077|ref|XP_006470270.1| PREDICTED: zinc finger
CCCH domain-containing protein 41-like isoform X4
[Citrus sinensis]
Length = 947
Score = 60.1 bits (144), Expect = 6e-07
Identities = 34/62 (54%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = -2
Query: 186 MELKVSSPKPG-LSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERDALDQ 10
MELKVSSPKP LSP DC RNHKHR++ETRS SLERD+LDQ
Sbjct: 1 MELKVSSPKPASLSPPDCTSDPEEKELSDEDDDD----RNHKHRRRETRSQSLERDSLDQ 56
Query: 9 VF 4
V+
Sbjct: 57 VY 58
>ref|XP_006446567.1| hypothetical protein CICLE_v10014173mg [Citrus clementina]
gi|557549178|gb|ESR59807.1| hypothetical protein
CICLE_v10014173mg [Citrus clementina]
Length = 946
Score = 60.1 bits (144), Expect = 6e-07
Identities = 34/62 (54%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = -2
Query: 186 MELKVSSPKPG-LSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERDALDQ 10
MELKVSSPKP LSP DC RNHKHR++ETRS SLERD+LDQ
Sbjct: 1 MELKVSSPKPASLSPPDCTSDPEEKELSDEDDDD----RNHKHRRRETRSQSLERDSLDQ 56
Query: 9 VF 4
V+
Sbjct: 57 VY 58
>ref|XP_012081373.1| PREDICTED: zinc finger CCCH domain-containing protein 41 [Jatropha
curcas] gi|802542490|ref|XP_012081382.1| PREDICTED: zinc
finger CCCH domain-containing protein 41 [Jatropha
curcas] gi|643739589|gb|KDP45327.1| hypothetical protein
JCGZ_09576 [Jatropha curcas]
Length = 958
Score = 58.5 bits (140), Expect = 2e-06
Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = -2
Query: 186 MELKVSSPKPG-LSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERDALDQ 10
MELKVSS KPG LSPSDC RNHKHR++ETRS SLERD+L+
Sbjct: 1 MELKVSSLKPGGLSPSDCASDPEEKEVSDEDDDD----RNHKHRRRETRSQSLERDSLEP 56
Query: 9 VFT 1
+FT
Sbjct: 57 MFT 59
>ref|XP_010108813.1| Zinc finger CCCH domain-containing protein 41 [Morus notabilis]
gi|587933353|gb|EXC20328.1| Zinc finger CCCH
domain-containing protein 41 [Morus notabilis]
Length = 930
Score = 58.2 bits (139), Expect = 2e-06
Identities = 35/63 (55%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = -2
Query: 186 MELKVSSPKPG-LSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERDALDQ 10
MELK+SSPK G LS SDC DRNHKHR+++TRS SLERD LDQ
Sbjct: 1 MELKISSPKLGNLSSSDC----NSDPEEKEVSDDDDDDRNHKHRRRDTRSQSLERDTLDQ 56
Query: 9 VFT 1
VFT
Sbjct: 57 VFT 59
>emb|CBI34878.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 57.8 bits (138), Expect = 3e-06
Identities = 35/63 (55%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -2
Query: 186 MELKVSSPKP-GLSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERDALDQ 10
MELKVSSPKP GLSPSD DRNHKHR++ETRS SLERD+L+Q
Sbjct: 1 MELKVSSPKPSGLSPSD----GESDPEEKEISDEDDDDRNHKHRRRETRSQSLERDSLEQ 56
Query: 9 VFT 1
V +
Sbjct: 57 VLS 59
>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41 [Vitis
vinifera] gi|731419004|ref|XP_010660871.1| PREDICTED:
zinc finger CCCH domain-containing protein 41 [Vitis
vinifera]
Length = 948
Score = 57.8 bits (138), Expect = 3e-06
Identities = 35/63 (55%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -2
Query: 186 MELKVSSPKP-GLSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERDALDQ 10
MELKVSSPKP GLSPSD DRNHKHR++ETRS SLERD+L+Q
Sbjct: 1 MELKVSSPKPSGLSPSD----GESDPEEKEISDEDDDDRNHKHRRRETRSQSLERDSLEQ 56
Query: 9 VFT 1
V +
Sbjct: 57 VLS 59
>ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
gi|223536016|gb|EEF37674.1| rrm/rnp domain, putative
[Ricinus communis]
Length = 972
Score = 56.6 bits (135), Expect = 6e-06
Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = -2
Query: 186 MELKVSSPKPG-LSPSDCVXXXXXXXXXXXXXXXXXXDRNHKHRKKETRSHSLERDALDQ 10
MELKV+S KPG LSPSDC RNHKHR++ETRS S ERD+L+
Sbjct: 1 MELKVASVKPGGLSPSDCASDPEEKEISDEDDDD----RNHKHRRRETRSQSTERDSLEP 56
Query: 9 VFT 1
+FT
Sbjct: 57 IFT 59