BLASTX nr result
ID: Forsythia23_contig00034208
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00034208
(376 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73912.1| polyprotein [Citrus sinensis] 189 5e-46
gb|AFB73911.1| polyprotein [Citrus sinensis] 185 1e-44
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 162 1e-37
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 159 5e-37
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 158 1e-36
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 158 1e-36
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 158 1e-36
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 157 3e-36
ref|XP_006484589.1| PREDICTED: uncharacterized protein LOC102625... 136 5e-30
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 94 5e-17
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 90 7e-16
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 90 7e-16
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 90 7e-16
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 89 9e-16
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 89 1e-15
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 87 3e-15
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 87 3e-15
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 86 7e-15
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 86 7e-15
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 86 1e-14
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 189 bits (481), Expect = 5e-46
Identities = 88/103 (85%), Positives = 97/103 (94%)
Frame = +3
Query: 66 PESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEP 245
PESSNAQGCVASTSDDGE+LY EA+IV+E RKRL+++WLIDSGATWHMTSRREWFH YEP
Sbjct: 255 PESSNAQGCVASTSDDGEILYSEATIVSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEP 314
Query: 246 ISEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
IS GSVYMG+DH LEIAGIGTIKIKMFDGT+RTI+EVRHV GL
Sbjct: 315 ISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIEEVRHVNGL 357
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 185 bits (469), Expect = 1e-44
Identities = 86/103 (83%), Positives = 95/103 (92%)
Frame = +3
Query: 66 PESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEP 245
PE+SNAQGCVASTSDDGE+LY EA+ V+E RKRL+++WLIDSGATWHMTSRREWFH YEP
Sbjct: 255 PETSNAQGCVASTSDDGEILYSEATTVSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEP 314
Query: 246 ISEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
IS GSVYMG+DH LEIAGIGTIKIKMFDGT+RTI EVRHV GL
Sbjct: 315 ISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIGEVRHVNGL 357
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 162 bits (409), Expect = 1e-37
Identities = 70/102 (68%), Positives = 89/102 (87%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E+S +QGCVASTSDDGEVLY EA++ + + RL ++W++DSGATWHMT RR+WF YEP+
Sbjct: 255 EASTSQGCVASTSDDGEVLYSEAAVSTKGKNRLTDVWIVDSGATWHMTPRRDWFCTYEPV 314
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
SEG+V+MG+DH LEI GIGT+KIKM+DGT+RT+QEVRHVK L
Sbjct: 315 SEGNVFMGNDHALEIVGIGTVKIKMYDGTIRTLQEVRHVKEL 356
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 159 bits (403), Expect = 5e-37
Identities = 71/102 (69%), Positives = 88/102 (86%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E+S +QGCVASTSDDGE+LY EA+ ++ +RL ++W++DSGATWHMT R+WF+ YEPI
Sbjct: 255 EASTSQGCVASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFYSYEPI 314
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
SEGSVYMG+DH LEIAG+GTI++KM DGTVR IQ VRHVKGL
Sbjct: 315 SEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGL 356
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 158 bits (400), Expect = 1e-36
Identities = 70/102 (68%), Positives = 88/102 (86%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E++ +QGCVASTSDDGE+LY EA+ +E ++L ++W++DSGATWHMT R+WF+ YEPI
Sbjct: 255 EATTSQGCVASTSDDGEILYSEAATSSEGERQLNDVWIMDSGATWHMTPHRDWFYSYEPI 314
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
SEGSVYMG+DH LEIAG+GTI++KM DGTVR IQ VRHVKGL
Sbjct: 315 SEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGL 356
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 158 bits (400), Expect = 1e-36
Identities = 71/102 (69%), Positives = 87/102 (85%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E+S +QGCVASTSDDGE+LY EA+ ++ +RL ++W++DSGATWHMT R+WF YEPI
Sbjct: 255 EASTSQGCVASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPI 314
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
SEGSVYMG+DH LEIAG+GTI++KM DGTVR IQ VRHVKGL
Sbjct: 315 SEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGL 356
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 158 bits (400), Expect = 1e-36
Identities = 71/102 (69%), Positives = 87/102 (85%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E+S +QGCVASTSDDGE+LY EA+ ++ +RL ++W++DSGATWHMT R+WF YEPI
Sbjct: 255 EASTSQGCVASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPI 314
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
SEGSVYMG+DH LEIAG+GTI++KM DGTVR IQ VRHVKGL
Sbjct: 315 SEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGL 356
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 157 bits (397), Expect = 3e-36
Identities = 76/102 (74%), Positives = 86/102 (84%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
++SN QG VASTSDDG L EASI E RKR A+IWLIDSGAT+HMTSR+EWFH YEPI
Sbjct: 246 QNSNPQGNVASTSDDGSALCCEASIAREGRKRFADIWLIDSGATYHMTSRKEWFHHYEPI 305
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
S GSVY DDH LEI GIGTIK+KM+DGTV+T+Q+VRHVKGL
Sbjct: 306 SGGSVYSCDDHALEIIGIGTIKLKMYDGTVQTVQDVRHVKGL 347
>ref|XP_006484589.1| PREDICTED: uncharacterized protein LOC102625372 [Citrus sinensis]
Length = 1258
Score = 136 bits (343), Expect = 5e-30
Identities = 62/77 (80%), Positives = 69/77 (89%)
Frame = +3
Query: 66 PESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEP 245
PESSNAQGCVASTSDDGE+LY EA+ V+E RKRL+++WLIDSG TWHMT +REWFH YEP
Sbjct: 118 PESSNAQGCVASTSDDGEILYSEATTVSEGRKRLSDVWLIDSGDTWHMTYQREWFHTYEP 177
Query: 246 ISEGSVYMGDDHPLEIA 296
IS GSVYMGDDH LEIA
Sbjct: 178 ISGGSVYMGDDHALEIA 194
Score = 136 bits (343), Expect = 5e-30
Identities = 62/77 (80%), Positives = 69/77 (89%)
Frame = +3
Query: 66 PESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEP 245
PESSNAQGCVASTSDDGE+LY EA+ V+E RKRL+++WLIDSG TWHMT +REWFH YEP
Sbjct: 455 PESSNAQGCVASTSDDGEILYSEATTVSEGRKRLSDVWLIDSGDTWHMTYQREWFHTYEP 514
Query: 246 ISEGSVYMGDDHPLEIA 296
IS GSVYMGDDH LEIA
Sbjct: 515 ISGGSVYMGDDHALEIA 531
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 93.6 bits (231), Expect = 5e-17
Identities = 45/100 (45%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Frame = +3
Query: 84 QGCVASTSD---DGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPISE 254
QG A +D D E+L A V + ++ WL+D+G T+HM R+WF YEP+
Sbjct: 213 QGKAAVATDNKPDAELLVAYAGCV-----QTSDEWLLDTGCTYHMCPNRDWFTTYEPVQG 267
Query: 255 GSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
G+V MGD+ P ++AG+GTI+IKMFDG +RT+ +VRH+ L
Sbjct: 268 GNVLMGDNTPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSL 307
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 89.7 bits (221), Expect = 7e-16
Identities = 41/102 (40%), Positives = 59/102 (57%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E V D E+L A + ++ W++D+ T+HM R+WF YE +
Sbjct: 269 EEEGKAAVVTDEKSDAELLVAYAGCA-----QTSDQWILDTACTYHMCPNRDWFATYEVV 323
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
G+V MGDD P E+AGIGT++IKMFDG +RT+ +VRH+ L
Sbjct: 324 QGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNL 365
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 89.7 bits (221), Expect = 7e-16
Identities = 41/102 (40%), Positives = 59/102 (57%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E V D E+L A + ++ W++D+ T+HM R+WF YE +
Sbjct: 86 EDEGKAAVVTDEKSDAELLVAYAGCA-----QTSDQWILDTACTYHMCPNRDWFATYEVV 140
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
G+V MGDD P E+AGIGT++IKMFDG +RT+ +VRH+ L
Sbjct: 141 QGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNL 182
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 89.7 bits (221), Expect = 7e-16
Identities = 41/102 (40%), Positives = 59/102 (57%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E V D E+L A + ++ W++D+ T+HM R+WF YE +
Sbjct: 254 EDEGKAAVVTDEKSDAELLVAYAGCA-----QTSDQWILDTACTYHMCPNRDWFATYEVV 308
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
G+V MGDD P E+AGIGT++IKMFDG +RT+ +VRH+ L
Sbjct: 309 QGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNL 350
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 89.4 bits (220), Expect = 9e-16
Identities = 41/102 (40%), Positives = 59/102 (57%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E V D E+L A + ++ W++D+ T+HM R+WF YE +
Sbjct: 178 EEEGKAAVVTDEKSDAELLVAYAGCA-----QTSDQWILDTACTYHMCPNRDWFATYEAV 232
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
G+V MGDD P E+AGIGT++IKMFDG +RT+ +VRH+ L
Sbjct: 233 QGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNL 274
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 89.0 bits (219), Expect = 1e-15
Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 12/94 (12%)
Frame = +3
Query: 129 GEASIVAEDRK------------RLANIWLIDSGATWHMTSRREWFHKYEPISEGSVYMG 272
G+A++V +++ + ++ W++D+ T+HM R+WF YE + G+V MG
Sbjct: 238 GKAAVVTDEKSDAELLVAYVGCAQTSDQWILDTACTYHMCPNRDWFATYETVQGGTVLMG 297
Query: 273 DDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
DD P E+AGIGT++IKMFDG +RT+ +VRH+ L
Sbjct: 298 DDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNL 331
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 87.4 bits (215), Expect = 3e-15
Identities = 41/102 (40%), Positives = 59/102 (57%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E V D E+L A + ++ W++D+ T+HM R+WF YE +
Sbjct: 304 EEEGKAAVVTDEKSDTELLVAYAGCA-----QTSDQWILDTAWTYHMCPNRDWFATYEAL 358
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
G+V MGDD P E+AGIGT++IKMFDG +RT+ +VRH+ L
Sbjct: 359 QGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNL 400
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 87.4 bits (215), Expect = 3e-15
Identities = 41/102 (40%), Positives = 59/102 (57%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E V D E+L A + ++ W++D+ T+HM R+WF YE +
Sbjct: 304 EEEGKAAVVTDEKSDTELLVAYAGCA-----QTSDQWILDTAWTYHMCPNRDWFATYEAL 358
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
G+V MGDD P E+AGIGT++IKMFDG +RT+ +VRH+ L
Sbjct: 359 QGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNL 400
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 86.3 bits (212), Expect = 7e-15
Identities = 40/102 (39%), Positives = 57/102 (55%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E V D E+L A + ++ W++D+ T+HM R+WF YE +
Sbjct: 211 EEEGKAAIVTDEKSDAELLVAYAGCA-----QTSDQWILDTACTYHMCPNRDWFATYEAV 265
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
G+V MGDD P E+AGIG ++IKMFDG +RT+ +VRH L
Sbjct: 266 QGGTVLMGDDTPCEVAGIGIVQIKMFDGCIRTLSDVRHFPNL 307
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 86.3 bits (212), Expect = 7e-15
Identities = 39/102 (38%), Positives = 58/102 (56%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E V D E+L A + ++ W++D+ T+HM R+WF YE +
Sbjct: 269 EEEGKAAVVTDEKSDAELLVAYAGCA-----QTSDQWILDTACTYHMCLNRDWFATYEAV 323
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
G+V MGDD P E+AG+ T++IKMFDG +RT+ +VRH+ L
Sbjct: 324 QGGTVLMGDDTPCEVAGVETVQIKMFDGCIRTLSDVRHIPNL 365
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 85.9 bits (211), Expect = 1e-14
Identities = 39/102 (38%), Positives = 58/102 (56%)
Frame = +3
Query: 69 ESSNAQGCVASTSDDGEVLYGEASIVAEDRKRLANIWLIDSGATWHMTSRREWFHKYEPI 248
E V D E+L A + ++ W++++ +HM R+WF YE +
Sbjct: 476 EEEGKAAVVTDEKSDAELLVAYAGCA-----QTSDQWILNTACIYHMCPNRDWFATYEAV 530
Query: 249 SEGSVYMGDDHPLEIAGIGTIKIKMFDGTVRTIQEVRHVKGL 374
G+V MGDD P E+AGIGT++IKMFDG +RT+ +VRH+ L
Sbjct: 531 QVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNL 572