BLASTX nr result
ID: Forsythia23_contig00034196
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia23_contig00034196 (614 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_007466061.1| PREDICTED: mucin-5B [Lipotes vexillifer] 60 8e-07 gb|AAW27053.1| unknown [Schistosoma japonicum] 57 9e-06 >ref|XP_007466061.1| PREDICTED: mucin-5B [Lipotes vexillifer] Length = 3975 Score = 60.1 bits (144), Expect = 8e-07 Identities = 38/135 (28%), Positives = 51/135 (37%), Gaps = 16/135 (11%) Frame = +3 Query: 192 FSSWCWHNHS----ALHCHPCLNRCFQLQFHFDFHQPVLDLRCTSRLCHHIRGRKSHFHH 359 +SS C H H H H C + H + C S CHH+ H HH Sbjct: 1761 YSSHCHHIHCHSPHGHHLHSHSPHCHHIHCHSHHCGHLYSSHCHSPHCHHLHCHSPHGHH 1820 Query: 360 ---HIRHLHWGNCYRHQSPH---------HRDSCYRHQIHLLH*GNCYLHIHQPLHQSSH 503 H H H +C+ H H H S + H+IH + +LH H P H Sbjct: 1821 FHCHSPHCHCIHCHSHHCDHLYSSHCHHIHCQSPHCHRIHCHRPHSHHLHCHSPHSHHIH 1880 Query: 504 LLSGNCHHRYLQNCH 548 S +CHH + + H Sbjct: 1881 SHSPHCHHIHCHSPH 1895 >gb|AAW27053.1| unknown [Schistosoma japonicum] Length = 230 Score = 56.6 bits (135), Expect = 9e-06 Identities = 42/133 (31%), Positives = 50/133 (37%), Gaps = 6/133 (4%) Frame = +3 Query: 171 YREYFKGFSSWCWHNHSAL-----HCHPCLNRCFQLQFHFDFHQPVLDLRCTSRLCHHIR 335 Y + C H + L HCHPCL FH + H C HI Sbjct: 27 YHHLLSRYPCHCHHPYHHLCRRHHHCHPCLPYHDHSSFHSNRHSSHFR-SCRHHTSPHIL 85 Query: 336 GRKSHFHHHIRHLHWGNC-YRHQSPHHRDSCYRHQIHLLH*GNCYLHIHQPLHQSSHLLS 512 KS HHH H +C +RH HH YRH +L H HIH H H Sbjct: 86 CHKSRVHHHNHH----HCNHRHHHFHHH---YRHHNNLDH------HIHHHRHHHIHHHH 132 Query: 513 GNCHHRYLQNCHL 551 HH YL + +L Sbjct: 133 SYHHHSYLHHSYL 145