BLASTX nr result
ID: Forsythia23_contig00033739
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00033739
(666 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA22288.1| polyprotein [Oryza australiensis] 201 4e-49
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group] 191 3e-46
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 188 3e-45
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 188 3e-45
gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subc... 186 1e-44
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 185 2e-44
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 183 6e-44
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 183 6e-44
gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subc... 181 4e-43
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc... 178 3e-42
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 177 6e-42
gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Jap... 171 2e-40
emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group] 169 9e-40
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 168 3e-39
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 124 7e-39
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 124 7e-39
gb|ADB85411.1| putative retrotransposon protein [Phyllostachys e... 132 7e-39
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 166 1e-38
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 165 2e-38
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 165 2e-38
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 201 bits (510), Expect = 4e-49
Identities = 111/222 (50%), Positives = 138/222 (62%), Gaps = 1/222 (0%)
Frame = -3
Query: 664 PVPKDTPALRKSSRVIHFPLRYDLLITSNVLLIEEDEPTTYA*SESSVDSKRWQEAMKSE 485
P DTPA R+S R P RY ++LL++ DEP TY + DS +W AMKSE
Sbjct: 758 PPVVDTPAPRRSERSRRAPDRYTGAEQRDILLLDNDEPKTYEEAMVGHDSNKWLGAMKSE 817
Query: 484 MNSMYENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*R 305
+ SMY+N+VW L+DPP+GVK I CK ++ KK + ++ +G
Sbjct: 818 IESMYDNQVWNLVDPPDGVKTIECKWLFKKKADMDGNVHIYKARLVAKGFKQIQGVDYDE 877
Query: 304 NLLTSSFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIE-PNKV 128
+ + RI LAI AY +Y+IWQMDVK AFLNGNLSEDVYM Q +GF E P K+
Sbjct: 878 TFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYMIQPQGFVDPESPGKI 937
Query: 127 CKLQKSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
CKLQKSIYGLKQ SWN+RFDE IK F FIKNE+E CVYK+
Sbjct: 938 CKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVYKK 979
>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
Length = 923
Score = 191 bits (485), Expect = 3e-46
Identities = 106/222 (47%), Positives = 140/222 (63%), Gaps = 5/222 (2%)
Frame = -3
Query: 652 DTPALRKSSRVIHFPLRYDLLITS--NVLLIEEDEPTTYA*SESSVDSKRWQEAMKSEMN 479
+ P+ R+S R P RY LL ++LL++ DEPTTY + DS++W AMKSE+
Sbjct: 643 EAPSSRRSERTRRTPARYALLTIRQRDILLLDNDEPTTYEETMVGPDSEKWLGAMKSEIE 702
Query: 478 SMYENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNL 299
SM+ N+VW L+DPP+GVK I CK V+ KK + ++ +G
Sbjct: 703 SMHVNQVWNLVDPPDGVKAIECKWVFKKKIDIDGNVHMYKAQLVAKGFRQIQGVDYDETF 762
Query: 298 LTSSFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEPN---KV 128
+ + RI LAI AY +Y+IWQMDVKIAFLNGNL EDVYMTQ +GF ++P K+
Sbjct: 763 SPIAMLKSIRIVLAIAAYFDYEIWQMDVKIAFLNGNLDEDVYMTQPKGF--VDPQSAKKI 820
Query: 127 CKLQKSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
CKLQKSIYGLKQ SWN+RFDE +K F+KNE++ CVYK+
Sbjct: 821 CKLQKSIYGLKQASRSWNIRFDEIVKALGFVKNEEDPCVYKK 862
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 188 bits (477), Expect = 3e-45
Identities = 103/222 (46%), Positives = 138/222 (62%), Gaps = 5/222 (2%)
Frame = -3
Query: 652 DTPALRKSSRVIHFPLRYDLLITS--NVLLIEEDEPTTYA*SESSVDSKRWQEAMKSEMN 479
+ PA R+S R+ P RY LL + ++LL++ DEPTTY + D+++W AMKSE+
Sbjct: 709 EAPASRRSERIRRTPARYALLTSGQRDILLLDNDEPTTYEEAMVGPDTEKWLGAMKSEIE 768
Query: 478 SMYENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNL 299
SM+ N+VW L+DPP+GVK I CK ++ K ++ +G
Sbjct: 769 SMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQGVDYDETF 828
Query: 298 LTSSFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEPN---KV 128
+ + RI LAI AY +Y+IWQMDVK AFLNGNL EDVYMTQ +GF ++P K+
Sbjct: 829 SPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGF--VDPQSAKKI 886
Query: 127 CKLQKSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
CKLQKSIY LKQ SWN+RFDE +K F+KNE+E CVYK+
Sbjct: 887 CKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKK 928
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 188 bits (477), Expect = 3e-45
Identities = 103/222 (46%), Positives = 138/222 (62%), Gaps = 5/222 (2%)
Frame = -3
Query: 652 DTPALRKSSRVIHFPLRYDLLITS--NVLLIEEDEPTTYA*SESSVDSKRWQEAMKSEMN 479
+ PA R+S R+ P RY LL + ++LL++ DEPTTY + D+++W AMKSE+
Sbjct: 622 EAPASRRSERIRRTPARYALLTSGQRDILLLDNDEPTTYEEAMVGPDTEKWLGAMKSEIE 681
Query: 478 SMYENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNL 299
SM+ N+VW L+DPP+GVK I CK ++ K ++ +G
Sbjct: 682 SMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQGVDYDETF 741
Query: 298 LTSSFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEPN---KV 128
+ + RI LAI AY +Y+IWQMDVK AFLNGNL EDVYMTQ +GF ++P K+
Sbjct: 742 SPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGF--VDPQSAKKI 799
Query: 127 CKLQKSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
CKLQKSIY LKQ SWN+RFDE +K F+KNE+E CVYK+
Sbjct: 800 CKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKK 841
>gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 649
Score = 186 bits (471), Expect = 1e-44
Identities = 106/220 (48%), Positives = 134/220 (60%), Gaps = 3/220 (1%)
Frame = -3
Query: 652 DTPALRKSSRVIHFPLRYDLLITS--NVLLIEEDEPTTYA*SESSVDSKRWQEAMKSEMN 479
+ PA R+S R+ P RY LL T ++LL++ DEPTTY + DS++W EAMKSE+
Sbjct: 163 EAPASRRSERIRRTPARYALLTTGQRDILLLDNDEPTTYEEAMVGPDSEKWLEAMKSEIE 222
Query: 478 SMYENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNL 299
M+ N+VW L+DPP+GVK I CK V+ KK D G ++
Sbjct: 223 FMHVNQVWNLVDPPDGVKAIECKWVFKKK----------TDVDGNV------------HI 260
Query: 298 LTSSFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEPNK-VCK 122
+ V I LAI Y NY IWQMDVK AFLNGNL EDVYMTQ +GF + K +CK
Sbjct: 261 HKARLV----IVLAIATYFNYKIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKRICK 316
Query: 121 LQKSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
LQKSIYGLKQ SW + FDE +K+ F+KNE+E CVYK+
Sbjct: 317 LQKSIYGLKQASRSWKICFDEVVKVLGFVKNEEEPCVYKK 356
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 185 bits (470), Expect = 2e-44
Identities = 105/220 (47%), Positives = 136/220 (61%), Gaps = 3/220 (1%)
Frame = -3
Query: 652 DTPALRKSSRVIHFPLRYDLLITSNVLLIEEDEPTTYA*SESSVDSKRWQEAMKSEMNSM 473
+ A R+S R P+RY ++LL+ DEP TY + DS++W AMKSE++SM
Sbjct: 762 EASAPRRSKRPCQMPIRY----AHDILLLNNDEPNTYKEAMMDPDSEKWLGAMKSEIDSM 817
Query: 472 YENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNLLT 293
+N+VW L+DP +GVK I CK +Y KK + ++ +G
Sbjct: 818 RDNQVWNLVDPLDGVKTIECKWIYKKKIDMDGNVHIHKARLVAKGFRQVQGVDYDETFSL 877
Query: 292 SSFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEPN---KVCK 122
+ + RI LAI AY +Y+IWQMDVK AFLNG LSEDVYMTQ EGF ++PN KVCK
Sbjct: 878 VAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGKLSEDVYMTQPEGF--VDPNNASKVCK 935
Query: 121 LQKSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
LQKSIYGLKQ SWN+RFDE IK F F+KN++E CVY +
Sbjct: 936 LQKSIYGLKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMK 975
>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 183 bits (465), Expect = 6e-44
Identities = 104/222 (46%), Positives = 137/222 (61%), Gaps = 5/222 (2%)
Frame = -3
Query: 652 DTPALRKSSRVIHFPLRYDLLITS--NVLLIEEDEPTTYA*SESSVDSKRWQEAMKSEMN 479
+ PA R+S R+ P RY LL T ++LL+ DEPTTY + S++W AMKS++
Sbjct: 314 EAPASRRSERIRRTPARYALLTTGQCDILLLGNDEPTTYEEAMVGPGSEKWLGAMKSKIE 373
Query: 478 SMYENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNL 299
SM+ N+VW L+DP + VK I CK V+ KK + ++ +G
Sbjct: 374 SMHVNQVWNLVDPLDSVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVNYDETF 433
Query: 298 LTSSFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEPN---KV 128
+ + RI LAI AY +Y+IWQMDVK AFL+GNL EDVYMTQ +GF ++P K+
Sbjct: 434 SPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLSGNLDEDVYMTQPKGF--VDPQSAKKI 491
Query: 127 CKLQKSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
CKLQKSIYGLKQ SWN+RFDE IK F+KNE+E CVYK+
Sbjct: 492 CKLQKSIYGLKQASRSWNIRFDEVIKALGFVKNEEEPCVYKK 533
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 183 bits (465), Expect = 6e-44
Identities = 107/218 (49%), Positives = 136/218 (62%), Gaps = 3/218 (1%)
Frame = -3
Query: 646 PALRKSSRVIHFPLRY-DLLITSNVL-LIEEDEPTTYA*SESSVDSKRWQEAMKSEMNSM 473
P +R+S R H P R+ D ++ + L +IE DEPT+Y + DS +W EA KSEM SM
Sbjct: 409 PEVRRSERSRHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAKSEMESM 468
Query: 472 YENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNLLT 293
+NKVWTL+D P+GVKPI CK ++ KK + + +G
Sbjct: 469 SQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGIDYDETYSP 528
Query: 292 SSFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEP-NKVCKLQ 116
+ + RI LA A+++Y+IWQMDVK AFLNGNL E VYMTQ EGF E KVCKL
Sbjct: 529 VAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAARKVCKLH 588
Query: 115 KSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
+SIYGLKQ SWNLRF+E IK FDFI+NE+E CVYK+
Sbjct: 589 RSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKK 626
>gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 810
Score = 181 bits (458), Expect = 4e-43
Identities = 100/219 (45%), Positives = 135/219 (61%), Gaps = 5/219 (2%)
Frame = -3
Query: 643 ALRKSSRVIHFPLRYDLLITS--NVLLIEEDEPTTYA*SESSVDSKRWQEAMKSEMNSMY 470
A R+S R+ P RY LL T ++LL++ DEPT Y + DS++W AMKS++ SM+
Sbjct: 469 ASRRSKRIRRTPARYALLTTGQRDILLLDNDEPTIYEEAMVGPDSEKWLGAMKSKIESMH 528
Query: 469 ENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNLLTS 290
N+VW L+DPP+GVK I CK V+ K + ++ +G
Sbjct: 529 VNQVWNLVDPPDGVKAIKCKWVFKKNTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPV 588
Query: 289 SFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEPN---KVCKL 119
+ + RI L I AY +Y+IWQMDVK A LNGNL EDVYMTQ +GF ++P K+CKL
Sbjct: 589 AMLKSIRIVLTIAAYFDYEIWQMDVKTALLNGNLDEDVYMTQPKGF--VDPQSAKKICKL 646
Query: 118 QKSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
QKSIYGLK+ SWN+RFD+ +K F+KNE+E CVYK+
Sbjct: 647 QKSIYGLKKASRSWNIRFDKVVKALGFVKNEEEPCVYKK 685
>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 829
Score = 178 bits (451), Expect = 3e-42
Identities = 97/195 (49%), Positives = 124/195 (63%), Gaps = 3/195 (1%)
Frame = -3
Query: 577 VLLIEEDEPTTYA*SESSVDSKRWQEAMKSEMNSMYENKVWTLLDPPEGVKPISCKLVYV 398
V L ++DEPTTY + DS++W AMKSE+ SM+ N+VW L+DPP+GVK I CK V+
Sbjct: 572 VHLRDDDEPTTYVEAMVGPDSEKWLGAMKSEIESMHVNQVWNLVDPPDGVKAIECKWVFK 631
Query: 397 KKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNLLTSSFV*VNRIPLAIVAYHNYDIWQMD 218
KK + ++ +G + + RI LAI AY NY+IWQMD
Sbjct: 632 KKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPFAMLKSIRIVLAIAAYFNYEIWQMD 691
Query: 217 VKIAFLNGNLSEDVYMTQLEGFESIEPN---KVCKLQKSIYGLKQVFWSWNLRFDETIKM 47
VK FLNGNL EDVYMTQ +GF ++P K+CKLQKSIYGLKQ SWN+RFDE +K
Sbjct: 692 VKTTFLNGNLDEDVYMTQPKGF--VDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKA 749
Query: 46 FDFIKNEDELCVYKR 2
F+KNE+E CVYK+
Sbjct: 750 LRFVKNEEEPCVYKK 764
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 177 bits (448), Expect = 6e-42
Identities = 96/215 (44%), Positives = 130/215 (60%), Gaps = 3/215 (1%)
Frame = -3
Query: 637 RKSSRVIHFPLRYDLLITSNVLLIEE--DEPTTYA*SESSVDSKRWQEAMKSEMNSMYEN 464
R+S RV+H P RY L+ + +++ ++ ++P TY + + VD +W +AM EM SMY N
Sbjct: 775 RRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEMESMYFN 834
Query: 463 KVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNLLTSSF 284
VWTL+D P VKPI CK +Y +K + ++ +G K +
Sbjct: 835 SVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAM 894
Query: 283 V*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGF-ESIEPNKVCKLQKSI 107
+ RI L+I ++NY+IWQMDVK AFLNGNL E +YM Q EGF + KVCKLQKSI
Sbjct: 895 LKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSI 954
Query: 106 YGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
YGLKQ SWN+RFD IK + F +N DE CVYK+
Sbjct: 955 YGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKK 989
>gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Japonica Group]
Length = 637
Score = 171 bits (434), Expect = 2e-40
Identities = 98/220 (44%), Positives = 126/220 (57%), Gaps = 3/220 (1%)
Frame = -3
Query: 652 DTPALRKSSRVIHFPLRYDLLITS--NVLLIEEDEPTTYA*SESSVDSKRWQEAMKSEMN 479
+ PA R+S R+ P RY LL T ++LL++ DEPTTY + DS++W EAMKSE+
Sbjct: 163 EAPASRRSERIRRTPARYALLTTGQRDILLLDNDEPTTYEEAMVGPDSEKWLEAMKSEIE 222
Query: 478 SMYENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNL 299
M+ N+VW L+DPP+GVK I CK V+ KK
Sbjct: 223 FMHVNQVWNLVDPPDGVKAIECKWVFKKKTD----------------------------- 253
Query: 298 LTSSFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEPNK-VCK 122
V +++ L I WQMDVK AFLNGNL EDVYMTQ +GF + K +CK
Sbjct: 254 -VDGNVHIHKARLVI--------WQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKRICK 304
Query: 121 LQKSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
LQKSIYGLKQ SW + FDE +K+ F+KNE+E CVYK+
Sbjct: 305 LQKSIYGLKQASRSWKICFDEVVKVLGFVKNEEEPCVYKK 344
>emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]
Length = 746
Score = 169 bits (429), Expect = 9e-40
Identities = 99/219 (45%), Positives = 129/219 (58%), Gaps = 5/219 (2%)
Frame = -3
Query: 643 ALRKSSRVIHFPLRYDLLITS--NVLLIEEDEPTTYA*SESSVDSKRWQEAMKSEMNSMY 470
A ++ R+ P RY LL T ++LL++ DEPTTY + DS++W AMKSE+ SM+
Sbjct: 403 ASQRFERIRRTPARYALLTTGQHDILLLDNDEPTTYEETMVGPDSEKWLGAMKSEIESMH 462
Query: 469 ENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNLLTS 290
N+VW L+DPP+G + I D+ +K+
Sbjct: 463 VNQVWNLVDPPDGFRQIQ---------------GVDYDETFSPVTMLKSI---------- 497
Query: 289 SFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEPN---KVCKL 119
RI LAI AY +Y+IWQMDVK AFLNGNL EDVYMTQ +GF ++P K+CKL
Sbjct: 498 ------RIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGF--VDPQSAKKICKL 549
Query: 118 QKSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
QKSIYGLKQ SWN+RFDE +K F+KNE+E CVYK+
Sbjct: 550 QKSIYGLKQASRSWNIRFDEVVKASGFVKNEEEPCVYKK 588
>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 168 bits (425), Expect = 3e-39
Identities = 94/204 (46%), Positives = 125/204 (61%), Gaps = 1/204 (0%)
Frame = -3
Query: 610 PLRYDLLITSNVLLIEEDEPTTYA*SESSVDSKRWQEAMKSEMNSMYENKVWTLLDPPEG 431
P YD+ + N D+PTTY + +DS++ AMKSE+ SM+ N+VW L+DPP+G
Sbjct: 712 PKEYDVHLRDN------DKPTTYEEAMVGLDSEKCLGAMKSEIESMHVNQVWNLVDPPDG 765
Query: 430 VKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNLLTSSFV*VNRIPLAIV 251
VK I CK V+ KK + ++ +G + + RI LAI
Sbjct: 766 VKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIA 825
Query: 250 AYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEPNK-VCKLQKSIYGLKQVFWSWN 74
AY +Y+IWQM+VK AFLNGN EDVYMTQ +GF ++ K +CKLQKSIYGLKQ SWN
Sbjct: 826 AYFDYEIWQMEVKTAFLNGNHDEDVYMTQPKGFVDLQSAKMICKLQKSIYGLKQASRSWN 885
Query: 73 LRFDETIKMFDFIKNEDELCVYKR 2
+RFDE +K F+KNE+E CVYK+
Sbjct: 886 IRFDELVKALGFLKNEEEPCVYKK 909
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 124 bits (312), Expect(2) = 7e-39
Identities = 61/93 (65%), Positives = 72/93 (77%), Gaps = 3/93 (3%)
Frame = -3
Query: 271 RIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEPN---KVCKLQKSIYG 101
RI LAI AY +Y+IWQMDVK AFLNGNL EDVYMTQ +GF ++P K+CKLQKSIYG
Sbjct: 812 RIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGF--VDPQSAKKICKLQKSIYG 869
Query: 100 LKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
LKQ SWN+RFDE +K F+KNE+ CVYK+
Sbjct: 870 LKQASRSWNIRFDEVVKALGFVKNEEVPCVYKK 902
Score = 63.5 bits (153), Expect(2) = 7e-39
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = -1
Query: 408 WFTLKRVDMDGNVHTYKTRLVAKGYK*RQEIDFDETFSPVALFKLI 271
WF K+ D+DGNVH YK RLVAKG++ Q +D+DETF PVA+ K I
Sbjct: 766 WFFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSI 811
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 124 bits (312), Expect(2) = 7e-39
Identities = 61/93 (65%), Positives = 72/93 (77%), Gaps = 3/93 (3%)
Frame = -3
Query: 271 RIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEPN---KVCKLQKSIYG 101
RI LAI AY +Y+IWQMDVK AFLNGNL EDVYMTQ +GF ++P K+CKLQKSIYG
Sbjct: 754 RIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGF--VDPQSAKKICKLQKSIYG 811
Query: 100 LKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
LKQ SWN+RFDE +K F+KNE+ CVYK+
Sbjct: 812 LKQASRSWNIRFDEVVKALGFVKNEEVPCVYKK 844
Score = 63.5 bits (153), Expect(2) = 7e-39
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = -1
Query: 408 WFTLKRVDMDGNVHTYKTRLVAKGYK*RQEIDFDETFSPVALFKLI 271
WF K+ D+DGNVH YK RLVAKG++ Q +D+DETF PVA+ K I
Sbjct: 708 WFFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSI 753
>gb|ADB85411.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 566
Score = 132 bits (332), Expect(2) = 7e-39
Identities = 65/90 (72%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
Frame = -3
Query: 268 IPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESI-EPNKVCKLQKSIYGLKQ 92
I LAI AY +Y+IWQMDVK+AFLNGNLSEDVYMTQ E F + E KVCKL KSIYGLKQ
Sbjct: 351 IILAIAAYFDYEIWQMDVKMAFLNGNLSEDVYMTQPESFVDLKEARKVCKLNKSIYGLKQ 410
Query: 91 VFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
SWN+RFDE +K FDFIKNE+E CVYK+
Sbjct: 411 ASRSWNIRFDEVVKGFDFIKNEEEPCVYKK 440
Score = 55.8 bits (133), Expect(2) = 7e-39
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = -1
Query: 405 FTLKRVDMDGNVHTYKTRLVAKGYK*RQEIDFDETFSPVALFKLI 271
F K +DMD NVH +K RLVAKG+K Q +D+DE FSPVA+ + I
Sbjct: 305 FLRKTIDMDENVHVHKARLVAKGFKQIQCVDYDEAFSPVAMLESI 349
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 166 bits (420), Expect = 1e-38
Identities = 94/218 (43%), Positives = 127/218 (58%), Gaps = 3/218 (1%)
Frame = -3
Query: 646 PALRKSSRVIHFPLRYDLLITSNVLLIE--EDEPTTYA*SESSVDSKRWQEAMKSEMNSM 473
P R+S R I P+RY + V + + +D+P T+ + VD ++WQEAMK E+ SM
Sbjct: 112 PPPRRSGREIRLPIRYRENGEAQVAVTDGSDDDPLTFKMAMDDVDREKWQEAMKLEIESM 171
Query: 472 YENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNLLT 293
Y N VW L+D PEG+KPI CK +Y K + ++ +G K
Sbjct: 172 YSNSVWKLVDLPEGIKPIGCKWIYKXKRGPNGKVETFKARLVAKGFTQKEGVDYEDTFSP 231
Query: 292 SSFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFE-SIEPNKVCKLQ 116
+ RI L+I AY++Y+IWQMDVK FLNG+L E +YM Q EGF + KVCKLQ
Sbjct: 232 VXMLKSIRILLSIXAYYDYEIWQMDVKTXFLNGHLEETIYMVQPEGFVVKDQEQKVCKLQ 291
Query: 115 KSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
+SIYGLKQ SWN+ F+E IK + F +N E CVYK+
Sbjct: 292 RSIYGLKQASRSWNIIFNEAIKSYGFEQNLGEPCVYKQ 329
>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 165 bits (417), Expect = 2e-38
Identities = 97/219 (44%), Positives = 128/219 (58%), Gaps = 8/219 (3%)
Frame = -3
Query: 640 LRKSSRVIHFPLRYDLLITSNV-------LLIEEDEPTTYA*SESSVDSKRWQEAMKSEM 482
LR+S RV P Y ITS+ LI DEP Y + + +S +W+EAM SE+
Sbjct: 742 LRRSGRVSMPPEFYGFHITSDGDTFVSDRTLINLDEPANYQEAVAGPESAKWKEAMDSEI 801
Query: 481 NSMYENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RN 302
SMY+N+VW L+D G K + CK ++ KK + ++ +G
Sbjct: 802 KSMYDNQVWNLVDNVPGRKTVGCKWIFKKKTDMDGKVHTFKARLVAKGFTQTPGVDYDET 861
Query: 301 LLTSSFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGF-ESIEPNKVC 125
+ + RI LAI A+H+Y+IWQMDVK AFLNG L+EDVYM Q EGF ++ PNKVC
Sbjct: 862 FSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAFLNGKLTEDVYMNQPEGFVDAKYPNKVC 921
Query: 124 KLQKSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVY 8
KL++SIYGLKQ SWNL F E +K F F ++EDE CVY
Sbjct: 922 KLERSIYGLKQASRSWNLCFHEKVKEFGFSRSEDESCVY 960
>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 655
Score = 165 bits (417), Expect = 2e-38
Identities = 97/221 (43%), Positives = 130/221 (58%), Gaps = 3/221 (1%)
Frame = -3
Query: 655 KDTPALRKSSRVIHFPLRYDLLITSNVLLIEEDEPTTYA*SESSVDSKRWQEAMKSEMNS 476
KD+ ++ R+ P Y + + N DEPTTY + S++W AMKS++ S
Sbjct: 276 KDSGSMLWKHRLHEGPKGYGVHLRGN------DEPTTYEEAMVGPGSEKWLGAMKSKIES 329
Query: 475 MYENKVWTLLDPPEGVKPISCKLVYVKKGRHGW*CSYLQDKIGCEGL*VKTRD*L*RNLL 296
M+ N+VW L+DP + VK I CK V+ KK + ++ +G
Sbjct: 330 MHVNQVWNLVDPLDSVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVNYDETFS 389
Query: 295 TSSFV*VNRIPLAIVAYHNYDIWQMDVKIAFLNGNLSEDVYMTQLEGFESIEPN---KVC 125
+ + RI LAI AY +Y+IWQMDVK AFL+GNL EDVYMTQ +GF ++P K+C
Sbjct: 390 PVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLSGNLDEDVYMTQPKGF--VDPQSAKKIC 447
Query: 124 KLQKSIYGLKQVFWSWNLRFDETIKMFDFIKNEDELCVYKR 2
KLQKSIYGLKQ SWN+RFDE IK F+KNE+E CVYK+
Sbjct: 448 KLQKSIYGLKQASRSWNIRFDEVIKALGFVKNEEEPCVYKK 488