BLASTX nr result

ID: Forsythia23_contig00033034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00033034
         (554 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010094620.1| putative CRM domain-containing protein [Moru...    63   3e-09
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          53   8e-06

>ref|XP_010094620.1| putative CRM domain-containing protein [Morus notabilis]
           gi|587867008|gb|EXB56439.1| putative CRM
           domain-containing protein [Morus notabilis]
          Length = 506

 Score = 63.2 bits (152), Expect(3) = 3e-09
 Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
 Frame = -2

Query: 271 KSYDRVPEKVLSCVLERR--KFLFIKSILLQICVLVVVSVRYIGTVVIYSHLTIDLHRGS 98
           K+YDRVP +VL  VLE+R     +IK ++  +   VV SVR  G       + I L++GS
Sbjct: 162 KAYDRVPREVLWWVLEKRGVHVRYIK-VIKDMYDRVVTSVRTAGGYTAEFPIRIGLNQGS 220

Query: 97  ILSPYLLTIVMDELTRHVED 38
            LSPYL TIVMDELTR ++D
Sbjct: 221 ALSPYLFTIVMDELTREIQD 240



 Score = 21.9 bits (45), Expect(3) = 3e-09
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 306 ETRLDMIFIDLENPMIGCPRK 244
           +T L M+FIDLE      PR+
Sbjct: 150 KTDLHMVFIDLEKAYDRVPRE 170



 Score = 21.9 bits (45), Expect(3) = 3e-09
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 35  VPWCMSIIDD 6
           VPWCM   DD
Sbjct: 242 VPWCMLFADD 251


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 53.1 bits (126), Expect(3) = 8e-06
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = -2

Query: 271 KSYDRVPEKVLSCVLE--RRKFLFIKSILLQICVLVVVSVRYIGTVVIYSHLTIDLHRGS 98
           K+YDRVP +VL  VLE  R +  +I++I   +      SV+  G V     + I LH+GS
Sbjct: 201 KAYDRVPREVLWKVLEKMRVRIAYIRAIK-DMYDGATTSVKTQGGVTEEFPIGIGLHQGS 259

Query: 97  ILSPYLLTIVMDELTRHVED 38
            LSPYL TIV++ LT H+++
Sbjct: 260 SLSPYLFTIVLEVLTEHIQE 279



 Score = 21.6 bits (44), Expect(3) = 8e-06
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 353 EICYLLRRWIEKCSEKKQD 297
           E  YLLRR +E+    K+D
Sbjct: 173 EAIYLLRRMMERYRSNKRD 191



 Score = 20.4 bits (41), Expect(3) = 8e-06
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 297 LDMIFIDLENPMIGCPRK 244
           L M+FIDLE      PR+
Sbjct: 192 LHMVFIDLEKAYDRVPRE 209


Top