BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00031992
         (581 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV su...   289   5e-76
ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV su...   283   5e-74
gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythra...   283   5e-74
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   280   3e-73
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   262   7e-68
ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV su...   261   1e-67
ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su...   261   1e-67
ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV su...   258   1e-66
ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV su...   258   1e-66
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   256   4e-66
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   256   4e-66
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su...   256   7e-66
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su...   256   7e-66
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su...   256   7e-66
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              256   7e-66
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   256   7e-66
ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV su...   254   3e-65
ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV su...   254   3e-65
gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium r...   254   3e-65
ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV su...   254   3e-65

>ref|XP_011081158.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Sesamum
           indicum]
          Length = 1408

 Score =  289 bits (740), Expect = 5e-76
 Identities = 138/181 (76%), Positives = 157/181 (86%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P QIA N+L+ DH+N+WNWDRLEPCCDFMLY++G  SV RNG++ICI SK  L  GD I 
Sbjct: 307 PFQIAENVLISDHINLWNWDRLEPCCDFMLYRRGYFSVLRNGQRICIWSKDMLRTGDSIC 366

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPLIDGDI+LINRPPSIHQHSLIA+ V+ILP  SV+S+NP++CSPLRGDFDGDCLHGYVP
Sbjct: 367 RPLIDGDIVLINRPPSIHQHSLIALSVRILPIKSVVSINPLVCSPLRGDFDGDCLHGYVP 426

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QSV SRVELNELV L++QL NGQ+G NLLSLS DSLTAA+L LEDGV LNK EMQQLQMF
Sbjct: 427 QSVTSRVELNELVSLNEQLHNGQNGRNLLSLSQDSLTAAYLFLEDGVLLNKPEMQQLQMF 486

Query: 40  C 38
           C
Sbjct: 487 C 487


>ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Erythranthe
           guttatus] gi|848869730|ref|XP_012835485.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1 [Erythranthe
           guttatus] gi|848869733|ref|XP_012835486.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1 [Erythranthe
           guttatus]
          Length = 1447

 Score =  283 bits (723), Expect = 5e-74
 Identities = 134/180 (74%), Positives = 155/180 (86%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  +A NML+ DH+N+WNWD+LE CCDFML  KG+ S+ RNG++I I SK  L  GD + 
Sbjct: 346 PSHVAENMLIADHINLWNWDKLEVCCDFMLCHKGNFSILRNGERITIWSKDMLRTGDSLR 405

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPLIDGDI+L+NRPPSIHQHSLIA+ VKILPT SV+S+NP+ICSP RGDFDGDCLHGYVP
Sbjct: 406 RPLIDGDIVLVNRPPSIHQHSLIALSVKILPTTSVVSINPLICSPFRGDFDGDCLHGYVP 465

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QSV+SRVEL ELV LDKQL+NGQSG NLLSL+ DSLTAAHLILEDGV LNK+E+QQLQMF
Sbjct: 466 QSVNSRVELQELVSLDKQLVNGQSGRNLLSLAQDSLTAAHLILEDGVILNKTEIQQLQMF 525


>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythranthe guttata]
          Length = 1379

 Score =  283 bits (723), Expect = 5e-74
 Identities = 134/180 (74%), Positives = 155/180 (86%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  +A NML+ DH+N+WNWD+LE CCDFML  KG+ S+ RNG++I I SK  L  GD + 
Sbjct: 316 PSHVAENMLIADHINLWNWDKLEVCCDFMLCHKGNFSILRNGERITIWSKDMLRTGDSLR 375

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPLIDGDI+L+NRPPSIHQHSLIA+ VKILPT SV+S+NP+ICSP RGDFDGDCLHGYVP
Sbjct: 376 RPLIDGDIVLVNRPPSIHQHSLIALSVKILPTTSVVSINPLICSPFRGDFDGDCLHGYVP 435

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QSV+SRVEL ELV LDKQL+NGQSG NLLSL+ DSLTAAHLILEDGV LNK+E+QQLQMF
Sbjct: 436 QSVNSRVELQELVSLDKQLVNGQSGRNLLSLAQDSLTAAHLILEDGVILNKTEIQQLQMF 495


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  280 bits (717), Expect = 3e-73
 Identities = 134/180 (74%), Positives = 154/180 (85%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P++IA NMLV D++ +WNWD+LE CCD ML + G  SV R+G+K C+RS   L  GD IY
Sbjct: 19  PIEIAKNMLVSDNIYLWNWDKLESCCDLMLRRNGQFSVTRDGQKTCVRSADMLRTGDSIY 78

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPLIDGDI+LINRPPSIHQHSLIA+ VKILP NSV+S+NP+ CSPLRGDFDGDCLHGYVP
Sbjct: 79  RPLIDGDIVLINRPPSIHQHSLIALSVKILPINSVVSINPLTCSPLRGDFDGDCLHGYVP 138

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QSV++RVEL ELV L+KQL+NGQSG NLLSLS DSLTAAHLI +DGVFLNK EMQQLQMF
Sbjct: 139 QSVNTRVELKELVTLNKQLVNGQSGQNLLSLSQDSLTAAHLISQDGVFLNKPEMQQLQMF 198


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score =  262 bits (670), Expect = 7e-68
 Identities = 123/185 (66%), Positives = 145/185 (78%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  IA  + + +HL  WNWD+L  CC+  L +KGD+ VRR GK + +R    L  GDIIY
Sbjct: 347 PCPIAERLQISEHLTTWNWDKLNTCCEVRLLEKGDMHVRREGKLVRVRRTKELRIGDIIY 406

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPL DGD +LINRPPSIHQHSLIA+ VK+LP  SVL++NP+IC+P RGDFDGDCLHGYVP
Sbjct: 407 RPLNDGDTVLINRPPSIHQHSLIALSVKVLPATSVLAINPLICAPFRGDFDGDCLHGYVP 466

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QSVD+RVEL ELV LDKQLIN Q+G NLLS S DSL AAHL++EDGV L+  +MQQLQMF
Sbjct: 467 QSVDTRVELRELVALDKQLINVQNGRNLLSFSQDSLVAAHLVMEDGVLLSLQQMQQLQMF 526

Query: 40  CHHQL 26
           C HQL
Sbjct: 527 CPHQL 531


>ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Nicotiana sylvestris]
          Length = 1254

 Score =  261 bits (668), Expect = 1e-67
 Identities = 126/185 (68%), Positives = 154/185 (83%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  +A ++ + + L+  NW++L   CD M+ QKG I VRRNG  + I     L+ GDIIY
Sbjct: 130 PCHVAEDLHMAEPLSSRNWEKLSDHCDLMILQKGAIHVRRNGVLVRISVMDQLQRGDIIY 189

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPLIDGD++LINRPPSIHQHSLIA+ V+ILP  SVLS+NP++CSP RGDFDGDCLHGYVP
Sbjct: 190 RPLIDGDVVLINRPPSIHQHSLIALSVRILPIISVLSINPLVCSPFRGDFDGDCLHGYVP 249

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QS+DSRVEL+ELVGL++QLI+GQSG NLLSLSHDSLTAAHLILE+GVFL++ +MQQLQMF
Sbjct: 250 QSIDSRVELSELVGLNRQLIDGQSGQNLLSLSHDSLTAAHLILEEGVFLDRFQMQQLQMF 309

Query: 40  CHHQL 26
           C HQ+
Sbjct: 310 CPHQV 314


>ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1
           isoform X1 [Nicotiana sylvestris]
           gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed
           RNA polymerase IV subunit 1 isoform X1 [Nicotiana
           sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1
           isoform X1 [Nicotiana sylvestris]
          Length = 1447

 Score =  261 bits (668), Expect = 1e-67
 Identities = 126/185 (68%), Positives = 154/185 (83%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  +A ++ + + L+  NW++L   CD M+ QKG I VRRNG  + I     L+ GDIIY
Sbjct: 323 PCHVAEDLHMAEPLSSRNWEKLSDHCDLMILQKGAIHVRRNGVLVRISVMDQLQRGDIIY 382

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPLIDGD++LINRPPSIHQHSLIA+ V+ILP  SVLS+NP++CSP RGDFDGDCLHGYVP
Sbjct: 383 RPLIDGDVVLINRPPSIHQHSLIALSVRILPIISVLSINPLVCSPFRGDFDGDCLHGYVP 442

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QS+DSRVEL+ELVGL++QLI+GQSG NLLSLSHDSLTAAHLILE+GVFL++ +MQQLQMF
Sbjct: 443 QSIDSRVELSELVGLNRQLIDGQSGQNLLSLSHDSLTAAHLILEEGVFLDRFQMQQLQMF 502

Query: 40  CHHQL 26
           C HQ+
Sbjct: 503 CPHQV 507


>ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Nicotiana tomentosiformis]
          Length = 1211

 Score =  258 bits (659), Expect = 1e-66
 Identities = 124/185 (67%), Positives = 153/185 (82%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  +A ++ + + L+  NW++L   CD M+ QKG I VRRNG  + I     L+ GDIIY
Sbjct: 87  PCHVAEDLHMAEPLSSRNWEKLTDHCDLMILQKGAIHVRRNGVLVRISVMDQLQRGDIIY 146

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPLIDGD++LINRPPSIHQHSLIA+ V+ILP  SVLS+NP++CSP RGDFDGDCLHGYVP
Sbjct: 147 RPLIDGDVVLINRPPSIHQHSLIALSVRILPIISVLSINPLVCSPFRGDFDGDCLHGYVP 206

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QS+DSRVEL+ELVGL++QLI+GQSG NLLSLSHDSLTAAHL+LE GVFL++ ++QQLQMF
Sbjct: 207 QSIDSRVELSELVGLNRQLIDGQSGQNLLSLSHDSLTAAHLVLEGGVFLDRFQVQQLQMF 266

Query: 40  CHHQL 26
           C HQ+
Sbjct: 267 CPHQV 271


>ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Nicotiana tomentosiformis]
          Length = 1447

 Score =  258 bits (659), Expect = 1e-66
 Identities = 124/185 (67%), Positives = 153/185 (82%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  +A ++ + + L+  NW++L   CD M+ QKG I VRRNG  + I     L+ GDIIY
Sbjct: 323 PCHVAEDLHMAEPLSSRNWEKLTDHCDLMILQKGAIHVRRNGVLVRISVMDQLQRGDIIY 382

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPLIDGD++LINRPPSIHQHSLIA+ V+ILP  SVLS+NP++CSP RGDFDGDCLHGYVP
Sbjct: 383 RPLIDGDVVLINRPPSIHQHSLIALSVRILPIISVLSINPLVCSPFRGDFDGDCLHGYVP 442

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QS+DSRVEL+ELVGL++QLI+GQSG NLLSLSHDSLTAAHL+LE GVFL++ ++QQLQMF
Sbjct: 443 QSIDSRVELSELVGLNRQLIDGQSGQNLLSLSHDSLTAAHLVLEGGVFLDRFQVQQLQMF 502

Query: 40  CHHQL 26
           C HQ+
Sbjct: 503 CPHQV 507


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Solanum tuberosum]
          Length = 1233

 Score =  256 bits (655), Expect = 4e-66
 Identities = 120/185 (64%), Positives = 152/185 (82%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  +A N+ + + L++ NW+R+   CD M+ Q+G I VRRNG  + I     L+ GDII+
Sbjct: 114 PCHVAENLHMAESLSLRNWERMTDLCDLMILQRGGILVRRNGVLVRISVMDRLQNGDIIH 173

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPLIDGD+++INRPPSIHQHSLIA+ V+ILP NSVLS+NP++CSP RGDFDGDCLHGY+P
Sbjct: 174 RPLIDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIP 233

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QS+DSR+EL+ELV L +QL++GQ+G NLLSLSHDSLTAAHLILE GVFL++ +MQQLQMF
Sbjct: 234 QSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMF 293

Query: 40  CHHQL 26
           C  QL
Sbjct: 294 CPRQL 298


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Solanum tuberosum]
          Length = 1446

 Score =  256 bits (655), Expect = 4e-66
 Identities = 120/185 (64%), Positives = 152/185 (82%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  +A N+ + + L++ NW+R+   CD M+ Q+G I VRRNG  + I     L+ GDII+
Sbjct: 327 PCHVAENLHMAESLSLRNWERMTDLCDLMILQRGGILVRRNGVLVRISVMDRLQNGDIIH 386

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPLIDGD+++INRPPSIHQHSLIA+ V+ILP NSVLS+NP++CSP RGDFDGDCLHGY+P
Sbjct: 387 RPLIDGDVVMINRPPSIHQHSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIP 446

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QS+DSR+EL+ELV L +QL++GQ+G NLLSLSHDSLTAAHLILE GVFL++ +MQQLQMF
Sbjct: 447 QSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMF 506

Query: 40  CHHQL 26
           C  QL
Sbjct: 507 CPRQL 511


>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
           [Vitis vinifera]
          Length = 1354

 Score =  256 bits (653), Expect = 7e-66
 Identities = 120/186 (64%), Positives = 147/186 (79%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  IA  +L+ +HLN WNW+++   C+  L +KG   VRR G    +R     + GDIIY
Sbjct: 235 PCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIY 294

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPL DGDI+LINRPPSIHQHS+IA+ VK+LP NSV+S+NP+ CSP RGDFDGDCLHGY+P
Sbjct: 295 RPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIP 354

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QSVDSRVEL+ELV L++QLIN QSG NLLSLS DSL+AAHL++EDGV LN  +MQQL+MF
Sbjct: 355 QSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMF 414

Query: 40  CHHQLQ 23
           C +QLQ
Sbjct: 415 CPYQLQ 420


>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Vitis vinifera]
          Length = 1458

 Score =  256 bits (653), Expect = 7e-66
 Identities = 120/186 (64%), Positives = 147/186 (79%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  IA  +L+ +HLN WNW+++   C+  L +KG   VRR G    +R     + GDIIY
Sbjct: 341 PCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIY 400

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPL DGDI+LINRPPSIHQHS+IA+ VK+LP NSV+S+NP+ CSP RGDFDGDCLHGY+P
Sbjct: 401 RPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIP 460

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QSVDSRVEL+ELV L++QLIN QSG NLLSLS DSL+AAHL++EDGV LN  +MQQL+MF
Sbjct: 461 QSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMF 520

Query: 40  CHHQLQ 23
           C +QLQ
Sbjct: 521 CPYQLQ 526


>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Vitis vinifera]
          Length = 1460

 Score =  256 bits (653), Expect = 7e-66
 Identities = 120/186 (64%), Positives = 147/186 (79%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  IA  +L+ +HLN WNW+++   C+  L +KG   VRR G    +R     + GDIIY
Sbjct: 341 PCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIY 400

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPL DGDI+LINRPPSIHQHS+IA+ VK+LP NSV+S+NP+ CSP RGDFDGDCLHGY+P
Sbjct: 401 RPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIP 460

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QSVDSRVEL+ELV L++QLIN QSG NLLSLS DSL+AAHL++EDGV LN  +MQQL+MF
Sbjct: 461 QSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMF 520

Query: 40  CHHQLQ 23
           C +QLQ
Sbjct: 521 CPYQLQ 526


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  256 bits (653), Expect = 7e-66
 Identities = 120/186 (64%), Positives = 147/186 (79%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  IA  +L+ +HLN WNW+++   C+  L +KG   VRR G    +R     + GDIIY
Sbjct: 317 PCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIY 376

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPL DGDI+LINRPPSIHQHS+IA+ VK+LP NSV+S+NP+ CSP RGDFDGDCLHGY+P
Sbjct: 377 RPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIP 436

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QSVDSRVEL+ELV L++QLIN QSG NLLSLS DSL+AAHL++EDGV LN  +MQQL+MF
Sbjct: 437 QSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMF 496

Query: 40  CHHQLQ 23
           C +QLQ
Sbjct: 497 CPYQLQ 502


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  256 bits (653), Expect = 7e-66
 Identities = 120/186 (64%), Positives = 147/186 (79%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  IA  +L+ +HLN WNW+++   C+  L +KG   VRR G    +R     + GDIIY
Sbjct: 344 PCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIY 403

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPL DGDI+LINRPPSIHQHS+IA+ VK+LP NSV+S+NP+ CSP RGDFDGDCLHGY+P
Sbjct: 404 RPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIP 463

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QSVDSRVEL+ELV L++QLIN QSG NLLSLS DSL+AAHL++EDGV LN  +MQQL+MF
Sbjct: 464 QSVDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMF 523

Query: 40  CHHQLQ 23
           C +QLQ
Sbjct: 524 CPYQLQ 529


>ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
           [Gossypium raimondii]
          Length = 1300

 Score =  254 bits (648), Expect = 3e-65
 Identities = 118/181 (65%), Positives = 147/181 (81%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  +A  + + + LN WN +RL+ CC+  + +KG+I +RR GK + IR    ++ GD IY
Sbjct: 355 PCHVAEKLQIAEQLNRWNEERLKTCCNLRILEKGEIRIRREGKLVRIRHNEKVQVGDTIY 414

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPL DGD +LINRPPSIHQHSLIA+ VK+LP NSV+S+NP+ICSP RGDFDGDCLHGYVP
Sbjct: 415 RPLNDGDTVLINRPPSIHQHSLIALSVKVLPVNSVVSINPLICSPFRGDFDGDCLHGYVP 474

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QS+++RVEL+ELV LD+QLINGQSG NLLSLSHDSLTAA+L+ EDGV LN  +MQQL+MF
Sbjct: 475 QSINTRVELSELVSLDRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMF 534

Query: 40  C 38
           C
Sbjct: 535 C 535


>ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Gossypium raimondii]
          Length = 1340

 Score =  254 bits (648), Expect = 3e-65
 Identities = 118/181 (65%), Positives = 147/181 (81%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  +A  + + + LN WN +RL+ CC+  + +KG+I +RR GK + IR    ++ GD IY
Sbjct: 214 PCHVAEKLQIAEQLNRWNEERLKTCCNLRILEKGEIRIRREGKLVRIRHNEKVQVGDTIY 273

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPL DGD +LINRPPSIHQHSLIA+ VK+LP NSV+S+NP+ICSP RGDFDGDCLHGYVP
Sbjct: 274 RPLNDGDTVLINRPPSIHQHSLIALSVKVLPVNSVVSINPLICSPFRGDFDGDCLHGYVP 333

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QS+++RVEL+ELV LD+QLINGQSG NLLSLSHDSLTAA+L+ EDGV LN  +MQQL+MF
Sbjct: 334 QSINTRVELSELVSLDRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMF 393

Query: 40  C 38
           C
Sbjct: 394 C 394


>gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium raimondii]
          Length = 1478

 Score =  254 bits (648), Expect = 3e-65
 Identities = 118/181 (65%), Positives = 147/181 (81%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  +A  + + + LN WN +RL+ CC+  + +KG+I +RR GK + IR    ++ GD IY
Sbjct: 352 PCHVAEKLQIAEQLNRWNEERLKTCCNLRILEKGEIRIRREGKLVRIRHNEKVQVGDTIY 411

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPL DGD +LINRPPSIHQHSLIA+ VK+LP NSV+S+NP+ICSP RGDFDGDCLHGYVP
Sbjct: 412 RPLNDGDTVLINRPPSIHQHSLIALSVKVLPVNSVVSINPLICSPFRGDFDGDCLHGYVP 471

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QS+++RVEL+ELV LD+QLINGQSG NLLSLSHDSLTAA+L+ EDGV LN  +MQQL+MF
Sbjct: 472 QSINTRVELSELVSLDRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMF 531

Query: 40  C 38
           C
Sbjct: 532 C 532


>ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Gossypium raimondii] gi|823152441|ref|XP_012476046.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
           isoform X1 [Gossypium raimondii]
           gi|763758424|gb|KJB25755.1| hypothetical protein
           B456_004G207300 [Gossypium raimondii]
           gi|763758426|gb|KJB25757.1| hypothetical protein
           B456_004G207300 [Gossypium raimondii]
          Length = 1481

 Score =  254 bits (648), Expect = 3e-65
 Identities = 118/181 (65%), Positives = 147/181 (81%)
 Frame = -2

Query: 580 PVQIAGNMLVQDHLNVWNWDRLEPCCDFMLYQKGDISVRRNGKKICIRSKYSLEGGDIIY 401
           P  +A  + + + LN WN +RL+ CC+  + +KG+I +RR GK + IR    ++ GD IY
Sbjct: 355 PCHVAEKLQIAEQLNRWNEERLKTCCNLRILEKGEIRIRREGKLVRIRHNEKVQVGDTIY 414

Query: 400 RPLIDGDILLINRPPSIHQHSLIAVYVKILPTNSVLSVNPIICSPLRGDFDGDCLHGYVP 221
           RPL DGD +LINRPPSIHQHSLIA+ VK+LP NSV+S+NP+ICSP RGDFDGDCLHGYVP
Sbjct: 415 RPLNDGDTVLINRPPSIHQHSLIALSVKVLPVNSVVSINPLICSPFRGDFDGDCLHGYVP 474

Query: 220 QSVDSRVELNELVGLDKQLINGQSGHNLLSLSHDSLTAAHLILEDGVFLNKSEMQQLQMF 41
           QS+++RVEL+ELV LD+QLINGQSG NLLSLSHDSLTAA+L+ EDGV LN  +MQQL+MF
Sbjct: 475 QSINTRVELSELVSLDRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMF 534

Query: 40  C 38
           C
Sbjct: 535 C 535