BLASTX nr result
ID: Forsythia23_contig00031904
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00031904
(507 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011073493.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_009604540.1| PREDICTED: pentatricopeptide repeat-containi... 90 7e-16
ref|XP_012847213.1| PREDICTED: pentatricopeptide repeat-containi... 88 2e-15
ref|XP_009762023.1| PREDICTED: pentatricopeptide repeat-containi... 86 1e-14
gb|KDO46397.1| hypothetical protein CISIN_1g003295mg [Citrus sin... 85 2e-14
ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citr... 85 2e-14
ref|XP_010644689.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
emb|CBI29222.3| unnamed protein product [Vitis vinifera] 84 3e-14
ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_012466482.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_010274574.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containi... 80 5e-13
gb|KHG16388.1| hypothetical protein F383_21662 [Gossypium arboreum] 79 1e-12
ref|XP_010269879.1| PREDICTED: pentatricopeptide repeat-containi... 79 1e-12
emb|CDP20623.1| unnamed protein product [Coffea canephora] 79 1e-12
gb|AHB18408.1| pentatricopeptide repeat-containing protein [Goss... 79 1e-12
ref|XP_011465300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 74 5e-11
ref|XP_009342743.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 73 6e-11
ref|XP_010677535.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_002303480.2| pentatricopeptide repeat-containing family p... 72 1e-10
>ref|XP_011073493.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Sesamum indicum]
Length = 847
Score = 100 bits (250), Expect = 3e-19
Identities = 65/147 (44%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Frame = -1
Query: 429 MDIRRF--KNLNAATVTNVVLLQPIKRPFTISSSTA--PQNQKPENRKSSKLKLEDEGVP 262
MD+RR + AAT T +L PIKRP T+S PQN KPE ++ LE
Sbjct: 1 MDMRRLLVQKTAAATNTAAILFLPIKRPLTVSLHPLQKPQNPKPEPQEVGSSNLE----- 55
Query: 261 VKPGGAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLI 82
P AFD+ L NK S ILSS +L + K LL +PH FD+IF EI+ +
Sbjct: 56 ----ATPSAAAFDRSLHNKDSSFS-ILSSANLTINQCKDLLTHFTPHQFDSIFWEIHKYV 110
Query: 81 DPTIALKFFYFASTSAGFKFTLRSYRL 1
+ + ALKFFYFA S F+FTLRSY L
Sbjct: 111 NASTALKFFYFACESCSFRFTLRSYCL 137
>ref|XP_009604540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana tomentosiformis]
gi|697190943|ref|XP_009604541.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana tomentosiformis]
gi|697190945|ref|XP_009604542.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana tomentosiformis]
gi|697190947|ref|XP_009604544.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana tomentosiformis]
gi|697190949|ref|XP_009604545.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana tomentosiformis]
gi|697190951|ref|XP_009604546.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana tomentosiformis]
gi|697190953|ref|XP_009604547.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana tomentosiformis]
gi|697190955|ref|XP_009604548.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana tomentosiformis]
gi|697190957|ref|XP_009604549.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana tomentosiformis]
Length = 839
Score = 89.7 bits (221), Expect = 7e-16
Identities = 55/141 (39%), Positives = 76/141 (53%)
Frame = -1
Query: 429 MDIRRFKNLNAATVTNVVLLQPIKRPFTISSSTAPQNQKPENRKSSKLKLEDEGVPVKPG 250
MD+RR K + + IKRP T STA +Q E + K + K
Sbjct: 1 MDVRRLK-----IPKTIAIFSHIKRPLTCVISTASSDQISETLHQTPSKQPNPSSESKQ- 54
Query: 249 GAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLIDPTI 70
FD LN +KW++S+LS+PH+++ K K LL L+P FD IFLEI+ + P
Sbjct: 55 ----QKVFD---LNLRKWVTSVLSNPHVDSLKIKDLLTHLTPQQFDAIFLEIHSSLKPLN 107
Query: 69 ALKFFYFASTSAGFKFTLRSY 7
ALKFF+ AS S GF F+++SY
Sbjct: 108 ALKFFHLASGSYGFSFSVQSY 128
>ref|XP_012847213.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Erythranthe guttatus]
gi|604317058|gb|EYU29134.1| hypothetical protein
MIMGU_mgv1a001281mg [Erythranthe guttata]
Length = 847
Score = 88.2 bits (217), Expect = 2e-15
Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Frame = -1
Query: 429 MDIRRF------KNLNAATVTNVVLLQPIKRPFTISSSTAPQNQKPENRKSSKLKLEDEG 268
MD+RR K+ ++A T + PI+RP T+S KP+ K + E
Sbjct: 1 MDMRRLAAAAAHKSSSSAAATAAIFFLPIRRPLTVSPHPI---HKPKTPKKPSPQPNLEA 57
Query: 267 VPVKPGGAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYH 88
P A DQ L +K L+S+LS + N+ + K+L++Q+SP FD+IF EI++
Sbjct: 58 APPDSSAA-----LDQTLRYRKS-LASVLSGSNFNSNQCKELISQISPRQFDSIFWEIHN 111
Query: 87 LIDPTIALKFFYFASTSAGFKFTLRSY 7
I+P+ ALK FYFA F FTLRSY
Sbjct: 112 NIEPSTALKLFYFAGDYCSFSFTLRSY 138
>ref|XP_009762023.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana sylvestris]
gi|698530400|ref|XP_009762024.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana sylvestris]
gi|698530402|ref|XP_009762025.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana sylvestris]
gi|698530404|ref|XP_009762026.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana sylvestris]
gi|698530406|ref|XP_009762027.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana sylvestris]
gi|698530408|ref|XP_009762028.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Nicotiana sylvestris]
Length = 839
Score = 85.5 bits (210), Expect = 1e-14
Identities = 54/141 (38%), Positives = 74/141 (52%)
Frame = -1
Query: 429 MDIRRFKNLNAATVTNVVLLQPIKRPFTISSSTAPQNQKPENRKSSKLKLEDEGVPVKPG 250
MD+RR K + + IKRP T TA +Q E + K + K
Sbjct: 1 MDVRRLK-----IPKTIAIFSHIKRPLTCVIYTASSDQISETLHQTPSKQPNPSSESKQ- 54
Query: 249 GAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLIDPTI 70
FD LN +KW++S+LS+PH+++ K K LL L+P FD IFLEI+ + P
Sbjct: 55 ----QKVFD---LNLRKWVTSVLSNPHVDSLKIKDLLTHLTPLQFDAIFLEIHSSLKPLN 107
Query: 69 ALKFFYFASTSAGFKFTLRSY 7
ALKFF+ AS S F F++RSY
Sbjct: 108 ALKFFHLASGSYAFSFSVRSY 128
>gb|KDO46397.1| hypothetical protein CISIN_1g003295mg [Citrus sinensis]
Length = 833
Score = 85.1 bits (209), Expect = 2e-14
Identities = 56/143 (39%), Positives = 74/143 (51%)
Frame = -1
Query: 429 MDIRRFKNLNAATVTNVVLLQPIKRPFTISSSTAPQNQKPENRKSSKLKLEDEGVPVKPG 250
MD+RR +++ V RP T +STA Q Q+ NR +
Sbjct: 1 MDLRRLSIPKPCSLSIAV-----SRPLTHVTSTAQQQQELHNRNQQQQP----------- 44
Query: 249 GAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLIDPTI 70
P P + +Q LL KW+SS+LS L+ +K K L LSP FDT+F I ++P
Sbjct: 45 --PPPQSSNQSLL---KWVSSVLSKQSLDPSKCKLFLPNLSPQEFDTLFFSIRSNVNPKT 99
Query: 69 ALKFFYFASTSAGFKFTLRSYRL 1
ALKFFYFAS S F+FT+RSY L
Sbjct: 100 ALKFFYFASQSCNFRFTVRSYCL 122
>ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citrus clementina]
gi|568835123|ref|XP_006471629.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568835125|ref|XP_006471630.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|557534991|gb|ESR46109.1| hypothetical protein
CICLE_v10000274mg [Citrus clementina]
Length = 833
Score = 85.1 bits (209), Expect = 2e-14
Identities = 56/143 (39%), Positives = 74/143 (51%)
Frame = -1
Query: 429 MDIRRFKNLNAATVTNVVLLQPIKRPFTISSSTAPQNQKPENRKSSKLKLEDEGVPVKPG 250
MD+RR +++ V RP T +STA Q Q+ NR +
Sbjct: 1 MDLRRLSIPKPCSLSIAV-----SRPLTHVTSTAQQQQELHNRNQQQQP----------- 44
Query: 249 GAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLIDPTI 70
P P + +Q LL KW+SS+LS L+ +K K L LSP FDT+F I ++P
Sbjct: 45 --PPPQSSNQSLL---KWVSSVLSKQSLDPSKCKLFLPNLSPQEFDTLFFSIRSNVNPKT 99
Query: 69 ALKFFYFASTSAGFKFTLRSYRL 1
ALKFFYFAS S F+FT+RSY L
Sbjct: 100 ALKFFYFASQSCNFRFTVRSYCL 122
>ref|XP_010644689.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
gi|731382358|ref|XP_010644698.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
gi|731382360|ref|XP_010644702.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 842
Score = 84.3 bits (207), Expect = 3e-14
Identities = 49/120 (40%), Positives = 66/120 (55%)
Frame = -1
Query: 366 PIKRPFTISSSTAPQNQKPENRKSSKLKLEDEGVPVKPGGAPIPVAFDQILLNKKKWLSS 187
PI RP T +S AP P ++ P + D LL K ++S
Sbjct: 33 PIARPLTCVTSAAPHPPSPLPSQNQ------------------PPSSDHALL---KSVTS 71
Query: 186 ILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLIDPTIALKFFYFASTSAGFKFTLRSY 7
ILS+P L++T+ KQL+ LSPH FD++F + ++P AL FFYFAS S GF+FTLRSY
Sbjct: 72 ILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSY 131
>emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 84.3 bits (207), Expect = 3e-14
Identities = 49/120 (40%), Positives = 66/120 (55%)
Frame = -1
Query: 366 PIKRPFTISSSTAPQNQKPENRKSSKLKLEDEGVPVKPGGAPIPVAFDQILLNKKKWLSS 187
PI RP T +S AP P ++ P + D LL K ++S
Sbjct: 17 PIARPLTCVTSAAPHPPSPLPSQNQ------------------PPSSDHALL---KSVTS 55
Query: 186 ILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLIDPTIALKFFYFASTSAGFKFTLRSY 7
ILS+P L++T+ KQL+ LSPH FD++F + ++P AL FFYFAS S GF+FTLRSY
Sbjct: 56 ILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSY 115
>ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Solanum tuberosum]
Length = 928
Score = 84.3 bits (207), Expect = 3e-14
Identities = 52/143 (36%), Positives = 75/143 (52%)
Frame = -1
Query: 435 IHMDIRRFKNLNAATVTNVVLLQPIKRPFTISSSTAPQNQKPENRKSSKLKLEDEGVPVK 256
I MD+RR K + + IKRP T TA +Q E + ++ K
Sbjct: 88 IRMDVRRLK-----IPKTIAIFSHIKRPLTCVIYTASSDQISEPLQKAQSN--------K 134
Query: 255 PGGAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLIDP 76
P + + + LN +KW+ S+LS+P +++ K K LL L+P FD IFLEIY + P
Sbjct: 135 PNPSSEKKQKNGLDLNLRKWVVSVLSNPPVDSLKIKDLLTLLTPQQFDAIFLEIYSSLKP 194
Query: 75 TIALKFFYFASTSAGFKFTLRSY 7
LKFF+ AS + GF F++RSY
Sbjct: 195 LNVLKFFHVASGTCGFSFSVRSY 217
>ref|XP_012466482.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Gossypium raimondii]
gi|763817666|gb|KJB84450.1| hypothetical protein
B456_N026600 [Gossypium raimondii]
Length = 846
Score = 82.0 bits (201), Expect = 1e-13
Identities = 58/157 (36%), Positives = 82/157 (52%)
Frame = -1
Query: 477 SYMRIYTYTFTYIFIHMDIRRFKNLNAATVTNVVLLQPIKRPFTISSSTAPQNQKPENRK 298
S+ +Y T + MD+RR AA + + + PI RP T ++S++P +
Sbjct: 12 SFANLYPQTL----LAMDVRRL----AAVIKPIYIYTPITRPLTCATSSSPIPSPAAPQI 63
Query: 297 SSKLKLEDEGVPVKPGGAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHH 118
P + +P+PV +Q LL+ LSSILS P L+++KSKQLL LSP
Sbjct: 64 D----------PQRQPPSPLPV--NQSLLDT---LSSILSKPSLDSSKSKQLLPLLSPSD 108
Query: 117 FDTIFLEIYHLIDPTIALKFFYFASTSAGFKFTLRSY 7
FD F+ + DP L FF+ AS S F+FTLRSY
Sbjct: 109 FDRFFIALSPRADPKTTLNFFHLASRSFNFRFTLRSY 145
>ref|XP_010274574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Nelumbo nucifera]
gi|720059440|ref|XP_010274575.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Nelumbo nucifera]
Length = 856
Score = 82.0 bits (201), Expect = 1e-13
Identities = 44/97 (45%), Positives = 61/97 (62%)
Frame = -1
Query: 297 SSKLKLEDEGVPVKPGGAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHH 118
+S + + E P +P P +DQ LNK ++SILSS L+T+K ++ L+ +SPHH
Sbjct: 29 TSTAQQQHEQHPKQPPAPTPPPPYDQHFLNK---VTSILSSKSLDTSKCREALSHISPHH 85
Query: 117 FDTIFLEIYHLIDPTIALKFFYFASTSAGFKFTLRSY 7
FD IF E+ +P AL FF FAS S GF+FT+RSY
Sbjct: 86 FDHIFFELRSSTNPKTALNFFTFASQSVGFRFTVRSY 122
>ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Solanum lycopersicum]
gi|723740556|ref|XP_010312482.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Solanum lycopersicum]
Length = 839
Score = 80.1 bits (196), Expect = 5e-13
Identities = 51/141 (36%), Positives = 71/141 (50%)
Frame = -1
Query: 429 MDIRRFKNLNAATVTNVVLLQPIKRPFTISSSTAPQNQKPENRKSSKLKLEDEGVPVKPG 250
MD+RR K + + IKRP T TA +Q E + +G KP
Sbjct: 1 MDVRRLK-----IPKTIAIFSHIKRPLTCVIYTASSDQISEPLQ--------KGDSNKPN 47
Query: 249 GAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLIDPTI 70
+ + LN +KW+ S+LS P +++ K K LL L+P FD IFLEI+ + P
Sbjct: 48 PSSEKKQIKGLDLNLRKWVVSVLSDPPVDSLKIKDLLTLLNPQQFDAIFLEIHSSLKPLN 107
Query: 69 ALKFFYFASTSAGFKFTLRSY 7
LKFF+ AS + F FT+RSY
Sbjct: 108 VLKFFHVASGTCSFSFTVRSY 128
>gb|KHG16388.1| hypothetical protein F383_21662 [Gossypium arboreum]
Length = 794
Score = 79.0 bits (193), Expect = 1e-12
Identities = 58/143 (40%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Frame = -1
Query: 429 MDIRRFKNLNAATVTNVVLLQPIKRPFTI--SSSTAPQNQKPENRKSSKLKLEDEGVPVK 256
MD+RR AA + + + PI RP T SSS P P+ P +
Sbjct: 1 MDVRRL----AAVIKPIYIYTPITRPLTCVTSSSPIPSPAAPQID------------PQR 44
Query: 255 PGGAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLIDP 76
+P PV +Q LL+ LSSILS P L+++KSKQLL LSP FD F+ + DP
Sbjct: 45 QPSSPPPV--NQSLLDA---LSSILSKPSLDSSKSKQLLPLLSPADFDRFFIALSPRADP 99
Query: 75 TIALKFFYFASTSAGFKFTLRSY 7
L FF+ AS S F+FTLRSY
Sbjct: 100 KTTLNFFHLASRSFNFRFTLRSY 122
>ref|XP_010269879.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Nelumbo nucifera]
gi|720044416|ref|XP_010269880.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Nelumbo nucifera]
gi|720044419|ref|XP_010269881.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Nelumbo nucifera]
Length = 854
Score = 79.0 bits (193), Expect = 1e-12
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
Frame = -1
Query: 429 MDIRRFKNLNAATVTNVVL--LQPIKRPFTISSSTAPQNQKPENRKSSKLKLEDEGVPVK 256
MD+RR T +VL ++ R + S PQ Q+P +P
Sbjct: 1 MDLRRIATSIEPKHTPLVLSFIRCSSRATSTSQQQYPQQQQP--------------LP-- 44
Query: 255 PGGAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLIDP 76
P P +D+ +LNK ++SILS+ L+T+K +++L LSPHHFD +F ++ ++P
Sbjct: 45 ----PPPPPYDRSILNK---VASILSNKSLDTSKCREVLCHLSPHHFDRLFFDMRDSVNP 97
Query: 75 TIALKFFYFASTSAGFKFTLRSYRL 1
AL FF FAS S GF+FT+RSY L
Sbjct: 98 KTALNFFTFASQSLGFRFTVRSYCL 122
>emb|CDP20623.1| unnamed protein product [Coffea canephora]
Length = 867
Score = 79.0 bits (193), Expect = 1e-12
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 13/154 (8%)
Frame = -1
Query: 429 MDIRRFKNLNAATVTNVVLLQPIKRPFTISSST----APQNQKPENRKSSKLKLEDEGVP 262
MDI R + A + L PI R S++ + +N +PE ++ K + P
Sbjct: 1 MDITRLRAHKATKL----LFPPINRLLITSTAQDNIHSNRNNQPEKQQQQHQKPQLTK-P 55
Query: 261 VKPGGAPIP-----VAFDQILLNKK----KWLSSILSSPHLNTTKSKQLLNQLSPHHFDT 109
+ P P+P + +++ + ++ KW+SSILS L+ +K K LL LSP F+
Sbjct: 56 I-PKSKPLPGKEQWIDKEKVGIGERNNLAKWVSSILSKERLDFSKCKDLLTLLSPLQFEG 114
Query: 108 IFLEIYHLIDPTIALKFFYFASTSAGFKFTLRSY 7
IFL+I+ + P ALKFFYF+S S GF+F+LRSY
Sbjct: 115 IFLDIHQTVKPLAALKFFYFSSNSCGFRFSLRSY 148
>gb|AHB18408.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 846
Score = 79.0 bits (193), Expect = 1e-12
Identities = 57/157 (36%), Positives = 80/157 (50%)
Frame = -1
Query: 477 SYMRIYTYTFTYIFIHMDIRRFKNLNAATVTNVVLLQPIKRPFTISSSTAPQNQKPENRK 298
S+ +Y T + MD+RR AA + + + PI RP T ++S++P +
Sbjct: 12 SFANLYPQTL----LAMDVRRL----AAVIKPIYIYTPITRPLTCATSSSPIPSPAAPQI 63
Query: 297 SSKLKLEDEGVPVKPGGAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHH 118
P + +P PV +Q LL+ LSSILS P L+++KSKQLL LSP
Sbjct: 64 D----------PQRQPSSPPPV--NQSLLDT---LSSILSKPSLDSSKSKQLLPLLSPSD 108
Query: 117 FDTIFLEIYHLIDPTIALKFFYFASTSAGFKFTLRSY 7
FD F+ + DP L FF+ AS F+FTLRSY
Sbjct: 109 FDRFFIALSPRADPKTTLNFFHLASRCFNFRFTLRSY 145
>ref|XP_011465300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic [Fragaria vesca subsp.
vesca]
Length = 800
Score = 73.6 bits (179), Expect = 5e-11
Identities = 52/141 (36%), Positives = 72/141 (51%)
Frame = -1
Query: 429 MDIRRFKNLNAATVTNVVLLQPIKRPFTISSSTAPQNQKPENRKSSKLKLEDEGVPVKPG 250
MD+RR A+ L PI RP T + T + P S L+ P PG
Sbjct: 1 MDLRRLSISKPAS-----LFYPITRPITGVTFTLQRRHDPPPPPLS-LQPPTPPQPPNPG 54
Query: 249 GAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLIDPTI 70
LLN W+SS+LS+P L+++K + L+ LSPH FD +F I ++P
Sbjct: 55 -----------LLN---WVSSVLSNPSLDSSKCESLIPLLSPHQFDHLFYSIRSNVNPKT 100
Query: 69 ALKFFYFASTSAGFKFTLRSY 7
AL FF+FAS S F+FT+RS+
Sbjct: 101 ALHFFHFASQSFKFRFTVRSF 121
>ref|XP_009342743.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Pyrus x
bretschneideri]
Length = 835
Score = 73.2 bits (178), Expect = 6e-11
Identities = 51/141 (36%), Positives = 72/141 (51%)
Frame = -1
Query: 429 MDIRRFKNLNAATVTNVVLLQPIKRPFTISSSTAPQNQKPENRKSSKLKLEDEGVPVKPG 250
MD+RR + +++ L PI RP + + P+ L+L D+ P
Sbjct: 5 MDLRRL----SIPKSHLFLFSPINRPCATCTVLHRPQEPPQ---PPPLQLPDQPEPT--- 54
Query: 249 GAPIPVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLIDPTI 70
DQ L N W+SSILS P L+++K K L+ LSP FD +F I ++P
Sbjct: 55 --------DQTLHN---WVSSILSKPSLDSSKCKALVPLLSPLQFDQLFCSISSNVNPKT 103
Query: 69 ALKFFYFASTSAGFKFTLRSY 7
AL FFYFAS S F+FT+RS+
Sbjct: 104 ALHFFYFASESFKFRFTVRSF 124
>ref|XP_010677535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Beta vulgaris subsp. vulgaris]
gi|731333068|ref|XP_010677536.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Beta vulgaris subsp. vulgaris]
gi|870860167|gb|KMT11530.1| hypothetical protein
BVRB_5g108490 [Beta vulgaris subsp. vulgaris]
Length = 829
Score = 72.4 bits (176), Expect = 1e-10
Identities = 30/65 (46%), Positives = 46/65 (70%)
Frame = -1
Query: 201 KWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIYHLIDPTIALKFFYFASTSAGFKF 22
KW+SS+LS+P L+++K K +L LSP FD +F E+ L++P L+FFYF S G+ F
Sbjct: 53 KWVSSVLSNPSLDSSKCKDILTLLSPSQFDRVFSEVNSLVNPNTVLRFFYFGIESCGYSF 112
Query: 21 TLRSY 7
+++SY
Sbjct: 113 SVKSY 117
>ref|XP_002303480.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550342907|gb|EEE78459.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 842
Score = 72.0 bits (175), Expect = 1e-10
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Frame = -1
Query: 429 MDIRRFKNLNAATVTNVVLLQ-PIKRPFTISSSTAPQNQKPENRKSSKLKLEDEGVPVKP 253
MD+RR T+T + +Q P+KRP T ++T L+ + + P P
Sbjct: 5 MDMRRL------TITKPIFIQSPLKRPLTCITTT--------------LQKQHQIHPQAP 44
Query: 252 GGAPI------PVAFDQILLNKKKWLSSILSSPHLNTTKSKQLLNQLSPHHFDTIFLEIY 91
P+ P A +Q LL + +S ILS+P L+ K K+L+ LSP FD+ FL +
Sbjct: 45 PPPPLLQTQTNPQALNQSLLKR---VSLILSNPSLDCAKCKELVPHLSPQEFDSCFLALK 101
Query: 90 HLIDPTIALKFFYFASTSAGFKFTLRSY 7
++P AL FF+F S + F+FT RSY
Sbjct: 102 SNVNPKTALNFFHFVSETCKFRFTARSY 129