BLASTX nr result
ID: Forsythia23_contig00030911
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00030911
(517 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011071821.1| PREDICTED: RNA-dependent RNA polymerase 2 [S... 244 1e-62
gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza] 217 2e-54
gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlise... 215 1e-53
emb|CDP19325.1| unnamed protein product [Coffea canephora] 197 2e-48
ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [E... 187 2e-45
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 179 5e-43
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 174 2e-41
ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [N... 173 3e-41
ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [N... 171 1e-40
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 167 2e-39
ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [C... 166 6e-39
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 166 7e-39
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 166 7e-39
ref|XP_012440441.1| PREDICTED: RNA-dependent RNA polymerase 2 [G... 165 1e-38
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 165 1e-38
gb|KHG14638.1| RNA-dependent RNA polymerase 2 -like protein [Gos... 163 4e-38
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th... 163 4e-38
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2 [F... 163 4e-38
gb|KEH31853.1| RNA-dependent RNA polymerase family protein [Medi... 163 5e-38
gb|AES91141.2| RNA-dependent RNA polymerase family protein [Medi... 163 5e-38
>ref|XP_011071821.1| PREDICTED: RNA-dependent RNA polymerase 2 [Sesamum indicum]
Length = 1133
Score = 244 bits (624), Expect = 1e-62
Identities = 118/168 (70%), Positives = 141/168 (83%)
Frame = -3
Query: 509 IELFSDGGEYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISR 330
IE+F+ E+ NWKSRGHGRVQFD+PEAK +AL LS+Q KL F+G ++S+ +F+D+I R
Sbjct: 45 IEIFT---EHKNWKSRGHGRVQFDSPEAKIKALSLSEQRKLLFKGFYISISPSFEDVIIR 101
Query: 329 PLEPRNRVGDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKL 150
P+EPRNRVG G G+VL AG+M+R DC GILESWDGV+LW +PERKKLE F+ HEGE YKL
Sbjct: 102 PVEPRNRVGYGGGMVLLAGVMVRADCMGILESWDGVRLWFMPERKKLEFFVNHEGECYKL 161
Query: 149 EVQFGDVLETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
EVQFGDVLET GC LDGD + VDAILLKLK+APKVYRK+SG VASKF
Sbjct: 162 EVQFGDVLETRGCYLDGDGKKVDAILLKLKHAPKVYRKISGPKVASKF 209
>gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
Length = 972
Score = 217 bits (553), Expect = 2e-54
Identities = 103/168 (61%), Positives = 132/168 (78%)
Frame = -3
Query: 509 IELFSDGGEYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISR 330
+E+F+ E NWKSRGHGRVQF++PEAK +AL LS K F+G +LS+ + ++II R
Sbjct: 45 VEIFT---ERENWKSRGHGRVQFESPEAKIEALSLSHHRKFLFKGFYLSVTHSLEEIIIR 101
Query: 329 PLEPRNRVGDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKL 150
P++P RVGDG G+VLFAG+MIR DC G LESW+G+KLW +PERKK+ F+ H GESYKL
Sbjct: 102 PVDPIYRVGDGGGLVLFAGIMIRADCMGTLESWNGMKLWFMPERKKIHFFVDHGGESYKL 161
Query: 149 EVQFGDVLETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
EVQFGDVLE+ GCCL G VDAILLKL++APK+++KVSG +AS+F
Sbjct: 162 EVQFGDVLESRGCCLGGGDMKVDAILLKLRHAPKIFKKVSGPKIASRF 209
>gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlisea aurea]
Length = 1094
Score = 215 bits (547), Expect = 1e-53
Identities = 100/168 (59%), Positives = 136/168 (80%)
Frame = -3
Query: 509 IELFSDGGEYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISR 330
I++F+ E+ NWKSRGHGRVQFD+P+ K +AL LS++ KL F+G +L + +F+DII+R
Sbjct: 10 IDIFT---EHVNWKSRGHGRVQFDSPKFKAEALSLSEERKLVFKGHYLCVSHSFEDIITR 66
Query: 329 PLEPRNRVGDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKL 150
P++P NR+ + G+ L AG+M++GDC GILESW+G KLWV+PERKKL LFL +E ESYKL
Sbjct: 67 PVDPENRLENAAGLCLLAGIMLKGDCMGILESWNGCKLWVLPERKKLLLFLDNEEESYKL 126
Query: 149 EVQFGDVLETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
E+Q+GD+ ET+ CC +GD ++AILLKLK+APKV+RK+SG DV SKF
Sbjct: 127 EIQYGDICETHLCCSNGDGDEINAILLKLKHAPKVFRKISGPDVTSKF 174
>emb|CDP19325.1| unnamed protein product [Coffea canephora]
Length = 1120
Score = 197 bits (502), Expect = 2e-48
Identities = 97/168 (57%), Positives = 130/168 (77%)
Frame = -3
Query: 509 IELFSDGGEYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISR 330
IE+FS E+ NWKSRGHG+VQF+T EAK + L LS++ KLFF+GSHL L + D++I R
Sbjct: 41 IEIFS---EHKNWKSRGHGKVQFETLEAKIKCLSLSEKGKLFFKGSHLRLSHSIDEVIFR 97
Query: 329 PLEPRNRVGDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKL 150
P++ + R+ +G VL G+++R DC +LE WDGVK+W++PER LE +L+H GE YKL
Sbjct: 98 PVDSKLRIKNG---VLRTGILLRNDCMSVLERWDGVKVWIMPERNILEFWLSHGGECYKL 154
Query: 149 EVQFGDVLETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
EVQFGDVLE+ GCCL D QN +A+LLKLK+APK+Y+K SG +VA+KF
Sbjct: 155 EVQFGDVLESCGCCL--DDQNPNAVLLKLKHAPKIYQKFSGPNVAAKF 200
>ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [Erythranthe guttatus]
gi|604343689|gb|EYU42543.1| hypothetical protein
MIMGU_mgv1a000463mg [Erythranthe guttata]
Length = 1135
Score = 187 bits (475), Expect = 2e-45
Identities = 92/168 (54%), Positives = 124/168 (73%)
Frame = -3
Query: 509 IELFSDGGEYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISR 330
+E+F+ E NWKSRGHGRVQF+ EAK +AL LS+Q L F+G LS+ + +D+I R
Sbjct: 40 VEIFT---ERTNWKSRGHGRVQFEEQEAKIKALSLSEQGNLIFKGFRLSILPSSEDVIIR 96
Query: 329 PLEPRNRVGDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKL 150
P++P NRVG+ G AG+M+R +C +LE+W G LW +PERK+L+ + ++GESYKL
Sbjct: 97 PVDPTNRVGNCAGSGFVAGVMVRDNCMAVLENWVG-DLWFMPERKRLDFVVIYDGESYKL 155
Query: 149 EVQFGDVLETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
EVQFGDV E+ CCLD + VDAILLKLK+APKVY+K+SG V+S+F
Sbjct: 156 EVQFGDVAESGRCCLDRGGEKVDAILLKLKHAPKVYKKISGPKVSSRF 203
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 179 bits (455), Expect = 5e-43
Identities = 91/160 (56%), Positives = 116/160 (72%)
Frame = -3
Query: 485 EYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISRPLEPRNRV 306
E+ NWKSRG GRVQF+T +AK A LLS Q L FRGS LS+ FDDII RP+EPRN+V
Sbjct: 44 EHKNWKSRGFGRVQFETLQAKRAADLLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQV 103
Query: 305 GDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVL 126
G VL G ++ DC +LESW+GVK V+PER ++E ++ +GE YKLEV F DVL
Sbjct: 104 DSG---VLHVGFLVEDDCMLVLESWEGVKTLVMPERNRVEFWVDKDGERYKLEVPFDDVL 160
Query: 125 ETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
E+ CCL G K V+A+LLKLKYAPK+++K +G ++ASKF
Sbjct: 161 ESSACCLGGGK--VNALLLKLKYAPKIFQKFAGPNIASKF 198
>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
gi|462407047|gb|EMJ12511.1| hypothetical protein
PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 174 bits (441), Expect = 2e-41
Identities = 84/168 (50%), Positives = 122/168 (72%)
Frame = -3
Query: 509 IELFSDGGEYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISR 330
+E+ SD + NWKSRG GRVQF T EAK++A LS QN L F+ L L +DDII R
Sbjct: 39 VEIISD---HKNWKSRGFGRVQFTTLEAKSEAYSLSLQNGLVFKSESLRLSETYDDIIQR 95
Query: 329 PLEPRNRVGDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKL 150
P++P+ R+ G VL AG M++GDC +LESW+GV+ WV+PERK++E ++ E YKL
Sbjct: 96 PVDPKRRLN---GTVLHAGFMVKGDCMSMLESWEGVRAWVMPERKRVEFWVWLRDECYKL 152
Query: 149 EVQFGDVLETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
E+ F +++E++GC L G+K V+A+LLKLK+ P+++RK+SG +VA++F
Sbjct: 153 EIAFENIMESFGCRLGGEK--VNALLLKLKFGPRIFRKISGPNVAARF 198
>ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana
tomentosiformis]
Length = 1120
Score = 173 bits (439), Expect = 3e-41
Identities = 86/161 (53%), Positives = 120/161 (74%), Gaps = 1/161 (0%)
Frame = -3
Query: 485 EYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISRPLEPRNRV 306
E+ NWKSRGHGRVQF+T ++K Q+L LS+Q KL F+G L L +FDDII+RP+EP R
Sbjct: 46 EHKNWKSRGHGRVQFETAQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIEPNYRF 105
Query: 305 GDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTH-EGESYKLEVQFGDV 129
G +L G++++ D +LE+W+ VK ++PERK LE +++H +GE Y+LEVQFGD+
Sbjct: 106 QKG---ILHTGVLLKNDYMEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDI 162
Query: 128 LETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
+ET GC L+ +K A+LLKLK+APK+Y++VSG VASKF
Sbjct: 163 IETCGCSLEDEK---PALLLKLKHAPKLYQRVSGPGVASKF 200
>ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris]
Length = 1120
Score = 171 bits (434), Expect = 1e-40
Identities = 86/161 (53%), Positives = 119/161 (73%), Gaps = 1/161 (0%)
Frame = -3
Query: 485 EYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISRPLEPRNRV 306
E+ NWKSRGHGRVQF+T ++K QAL LS+Q KL F+G L L +FDDII RP+EP R
Sbjct: 46 EHKNWKSRGHGRVQFETSQSKLQALSLSEQGKLIFKGHQLILTSSFDDIIVRPIEPNYRF 105
Query: 305 GDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTH-EGESYKLEVQFGDV 129
G +L G++++ D +LE+W+ VK ++PERK LE ++++ +GE Y+LEVQFGD+
Sbjct: 106 QKG---ILHTGVLLKNDYMEVLETWENVKTLIMPERKSLEFWVSYAKGECYRLEVQFGDI 162
Query: 128 LETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
+ET GC L+ +K A+LLKLK+APK+Y++VSG VASKF
Sbjct: 163 IETCGCSLEDEK---PALLLKLKHAPKLYQRVSGPGVASKF 200
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 167 bits (424), Expect = 2e-39
Identities = 84/160 (52%), Positives = 114/160 (71%)
Frame = -3
Query: 485 EYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISRPLEPRNRV 306
E+ NWKSRGHGRVQF+T + K L LS+Q L F+G LSL +FDDII+RP+EP+ R
Sbjct: 46 EHKNWKSRGHGRVQFETLQDKLHCLSLSEQGNLLFKGHQLSLVSSFDDIIARPVEPKCRF 105
Query: 305 GDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVL 126
DG +L G++++ D +LE+W+ VK ++PERK LE +++H E Y+LEVQFGDV+
Sbjct: 106 QDG---ILHTGLLVKNDVMQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVV 162
Query: 125 ETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
E C L+ K A+LLKLK+APK+Y++VSG VASKF
Sbjct: 163 EATVCSLENQK---SALLLKLKHAPKLYQRVSGPAVASKF 199
>ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cucumis melo]
Length = 1117
Score = 166 bits (420), Expect = 6e-39
Identities = 86/168 (51%), Positives = 116/168 (69%)
Frame = -3
Query: 509 IELFSDGGEYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISR 330
IE+F+ E NWKSRG GRVQF T EAK +A+ LS QN L F +L L DDI+ R
Sbjct: 39 IEIFT---ERKNWKSRGSGRVQFTTLEAKAKAMALSVQNNLVFGTQNLRFSLINDDIVVR 95
Query: 329 PLEPRNRVGDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKL 150
P+ NR +G VL G M++ + +LESW+GVK W++PER+++E ++ HE E YKL
Sbjct: 96 PVHATNRTENG---VLHVGFMLKEERMSVLESWEGVKAWIMPERRRIEFWIWHEQECYKL 152
Query: 149 EVQFGDVLETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
EV F ++LET G CL +K N A+L KLKYAP++Y+K+SGS++ASKF
Sbjct: 153 EVMFEEILETTGYCLGEEKLN--ALLFKLKYAPRIYKKISGSNMASKF 198
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 166 bits (419), Expect = 7e-39
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 1/161 (0%)
Frame = -3
Query: 485 EYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISRPLEPRNRV 306
E+ NWKSRGHGRVQF+T ++K Q+L LS+Q KL F+G L L +FDDII+RP+E R
Sbjct: 46 EHKNWKSRGHGRVQFETSQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRF 105
Query: 305 GDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTH-EGESYKLEVQFGDV 129
G +L G+++ D +LE+W+ VK ++PERK LE +++H +GE Y+LEVQFGD+
Sbjct: 106 QKG---ILHTGILLENDYMEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDI 162
Query: 128 LETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
+ET C L+ +K A+LLKLK+APK+Y++VSG VASKF
Sbjct: 163 IETCECSLEDEK---TALLLKLKHAPKLYQRVSGPGVASKF 200
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus] gi|700208501|gb|KGN63597.1|
hypothetical protein Csa_1G005580 [Cucumis sativus]
Length = 1117
Score = 166 bits (419), Expect = 7e-39
Identities = 86/168 (51%), Positives = 117/168 (69%)
Frame = -3
Query: 509 IELFSDGGEYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISR 330
IE+F+ E NWKSRG GRVQF T EAK +A+ LS QN L F +L L DDI+ R
Sbjct: 39 IEIFT---ERKNWKSRGSGRVQFTTLEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVR 95
Query: 329 PLEPRNRVGDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKL 150
P+ NR +G VL G M++ + +LESW+GVK W++PER+++E ++ HE E YKL
Sbjct: 96 PVHATNRTENG---VLHVGFMLKEERMSVLESWEGVKAWIMPERRRIEFWIWHEQECYKL 152
Query: 149 EVQFGDVLETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
EV F ++LET G CL +K N A+LLKLKYAP++Y+K+SGS++AS+F
Sbjct: 153 EVMFEEILETTGHCLGEEKLN--ALLLKLKYAPRIYKKISGSNMASRF 198
>ref|XP_012440441.1| PREDICTED: RNA-dependent RNA polymerase 2 [Gossypium raimondii]
gi|763786137|gb|KJB53208.1| hypothetical protein
B456_008G296900 [Gossypium raimondii]
Length = 1147
Score = 165 bits (417), Expect = 1e-38
Identities = 80/158 (50%), Positives = 109/158 (68%)
Frame = -3
Query: 479 NNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISRPLEPRNRVGD 300
NNWKSRG GRVQF P+AK+ AL LS+ + L F+ L L +DDII RP+ +R+
Sbjct: 48 NNWKSRGFGRVQFAAPQAKSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDG 107
Query: 299 GMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLET 120
G VL AG M DC +LE W+GV+ W++PER++LE ++ +GE YKL+ F D+ ET
Sbjct: 108 G---VLHAGFMSSDDCLRVLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDIFET 164
Query: 119 YGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
GCC DG N A+LL+++YAP++Y+KVSG +VASKF
Sbjct: 165 VGCCFDGSACN--ALLLRVRYAPRIYQKVSGPNVASKF 200
>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 165 bits (417), Expect = 1e-38
Identities = 80/158 (50%), Positives = 109/158 (68%)
Frame = -3
Query: 479 NNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISRPLEPRNRVGD 300
NNWKSRG GRVQF P+AK+ AL LS+ + L F+ L L +DDII RP+ +R+
Sbjct: 48 NNWKSRGFGRVQFAAPQAKSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDG 107
Query: 299 GMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLET 120
G VL AG M DC +LE W+GV+ W++PER++LE ++ +GE YKL+ F D+ ET
Sbjct: 108 G---VLHAGFMSSDDCLRVLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDIFET 164
Query: 119 YGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
GCC DG N A+LL+++YAP++Y+KVSG +VASKF
Sbjct: 165 VGCCFDGSACN--ALLLRVRYAPRIYQKVSGPNVASKF 200
>gb|KHG14638.1| RNA-dependent RNA polymerase 2 -like protein [Gossypium arboreum]
Length = 1147
Score = 163 bits (413), Expect = 4e-38
Identities = 80/158 (50%), Positives = 108/158 (68%)
Frame = -3
Query: 479 NNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISRPLEPRNRVGD 300
NNWKSRG GRVQF P+A + AL LS+ + L F+ L L +DDII RP+ +R+
Sbjct: 48 NNWKSRGFGRVQFAAPQAMSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDG 107
Query: 299 GMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLET 120
G VL AG M DC +LE W+GV+ W++PER++LE ++ +GE YKL+ F D+ ET
Sbjct: 108 G---VLHAGFMSSDDCLRVLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDLFET 164
Query: 119 YGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
GCC DG N A+LL+++YAP++YRKVSG +VASKF
Sbjct: 165 VGCCFDGSACN--ALLLRVRYAPRIYRKVSGPNVASKF 200
>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
polymerase 2 isoform 1 [Theobroma cacao]
gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
Length = 1149
Score = 163 bits (413), Expect = 4e-38
Identities = 83/159 (52%), Positives = 111/159 (69%)
Frame = -3
Query: 479 NNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISRPLEPRNRVGD 300
NNWKSRG GRVQF T EAK++A LLS +N L F+ L L +DDII RP+ +R+
Sbjct: 53 NNWKSRGFGRVQFATLEAKSKAHLLSLRNDLVFKSHSLKLSETYDDIIPRPIRADHRLDG 112
Query: 299 GMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLET 120
G VL G M++ D +LE W+ V+ W++PER++LE +L + GE YKLEV F DVLET
Sbjct: 113 G---VLHVGFMVQDDYLRVLERWEDVRGWLMPERRRLEFWLWNNGECYKLEVLFDDVLET 169
Query: 119 YGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKFR 3
GCC +G N A+LL++KYAP++Y+KVSG ++ASK R
Sbjct: 170 VGCCFNGSSCN--ALLLRVKYAPRIYQKVSGPNIASKLR 206
>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2 [Fragaria vesca subsp.
vesca]
Length = 1136
Score = 163 bits (413), Expect = 4e-38
Identities = 80/168 (47%), Positives = 117/168 (69%)
Frame = -3
Query: 509 IELFSDGGEYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISR 330
+E+ SD + NWKSRG+GR+QF K +A LS LFF+ +L LF A DDII R
Sbjct: 42 VEIVSD---HKNWKSRGYGRIQFTALRHKARAQSLSSSADLFFKSHNLRLFEAHDDIIPR 98
Query: 329 PLEPRNRVGDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKL 150
PL+PR+R+ VL AG ++ + +LESW+GV+ WV+PERK++E ++ G+ YK+
Sbjct: 99 PLDPRHRLNS---TVLHAGFVVNDETMSVLESWEGVRAWVMPERKRVEFWVWRVGDCYKM 155
Query: 149 EVQFGDVLETYGCCLDGDKQNVDAILLKLKYAPKVYRKVSGSDVASKF 6
E+ F +++E+ GCCL GDK V+A+ LKLK+ PK++R++SG +VASKF
Sbjct: 156 EIAFENIVESVGCCLGGDK--VNALRLKLKFGPKIFRQLSGPNVASKF 201
>gb|KEH31853.1| RNA-dependent RNA polymerase family protein [Medicago truncatula]
Length = 1123
Score = 163 bits (412), Expect = 5e-38
Identities = 83/170 (48%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Frame = -3
Query: 509 IELFSDGGEYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISR 330
+E+FSD Y NWKSRG GRVQF+T EAK++AL L++ KL L L + DDII R
Sbjct: 41 LEIFSD---YTNWKSRGVGRVQFETLEAKSKALTLAENKKLLLSSHFLCLDASSDDIIPR 97
Query: 329 PLEPRNRVGDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKL 150
P PRNR+ +G L+AG I DC +L+SW+GV+ WV+PER++L+ ++TH + +KL
Sbjct: 98 PALPRNRINNG---ALYAGFPIGPDCMSVLQSWEGVRGWVMPERQRLDFWVTHGDQCFKL 154
Query: 149 EVQFGDVLETYGCCLD-GDKQNVDAILLKLKYAPKVYRKVSGSDVASKFR 3
E+ F ++LE G C D G K N A+LLKL+Y P++Y+K++G +VA+KF+
Sbjct: 155 EIPFENILECDGYCSDEGSKPN--ALLLKLRYGPRIYQKMAGPNVAAKFK 202
>gb|AES91141.2| RNA-dependent RNA polymerase family protein [Medicago truncatula]
Length = 1277
Score = 163 bits (412), Expect = 5e-38
Identities = 83/170 (48%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Frame = -3
Query: 509 IELFSDGGEYNNWKSRGHGRVQFDTPEAKNQALLLSQQNKLFFRGSHLSLFLAFDDIISR 330
+E+FSD Y NWKSRG GRVQF+T EAK++AL L++ KL L L + DDII R
Sbjct: 41 LEIFSD---YTNWKSRGVGRVQFETLEAKSKALTLAENKKLLLSSHFLCLDASSDDIIPR 97
Query: 329 PLEPRNRVGDGMGVVLFAGMMIRGDCFGILESWDGVKLWVVPERKKLELFLTHEGESYKL 150
P PRNR+ +G L+AG I DC +L+SW+GV+ WV+PER++L+ ++TH + +KL
Sbjct: 98 PALPRNRINNG---ALYAGFPIGPDCMSVLQSWEGVRGWVMPERQRLDFWVTHGDQCFKL 154
Query: 149 EVQFGDVLETYGCCLD-GDKQNVDAILLKLKYAPKVYRKVSGSDVASKFR 3
E+ F ++LE G C D G K N A+LLKL+Y P++Y+K++G +VA+KF+
Sbjct: 155 EIPFENILECDGYCSDEGSKPN--ALLLKLRYGPRIYQKMAGPNVAAKFK 202