BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00030803
         (1398 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP07323.1| unnamed protein product [Coffea canephora]            543   e-151
ref|XP_009778087.1| PREDICTED: tRNA pseudouridine synthase A, mi...   527   e-147
ref|XP_009589249.1| PREDICTED: tRNA pseudouridine synthase A, mi...   525   e-146
emb|CBI18897.3| unnamed protein product [Vitis vinifera]              506   e-140
ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phas...   506   e-140
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas...   506   e-140
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi...   506   e-140
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   506   e-140
gb|KHN42806.1| tRNA pseudouridine synthase 1 [Glycine soja]           504   e-140
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu...   503   e-139
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|...   502   e-139
ref|XP_008452911.1| PREDICTED: tRNA pseudouridine synthase A, mi...   501   e-139
ref|XP_008221186.1| PREDICTED: tRNA pseudouridine synthase A, mi...   499   e-138
ref|XP_011003107.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   498   e-138
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   498   e-138
ref|XP_010064573.1| PREDICTED: tRNA pseudouridine synthase A, mi...   498   e-138
ref|XP_010266077.1| PREDICTED: tRNA pseudouridine synthase A, mi...   497   e-137
ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mi...   494   e-137
ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mi...   494   e-137
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ...   493   e-136

>emb|CDP07323.1| unnamed protein product [Coffea canephora]
          Length = 423

 Score =  543 bits (1399), Expect = e-151
 Identities = 276/393 (70%), Positives = 315/393 (80%), Gaps = 5/393 (1%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFYVDPPGL++RLNS L PQIR+FG+KRVT SFNAKKFCDRRRYVYLIP
Sbjct: 46   GVSAVGQVVSGRFYVDPPGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIP 105

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFALDPSCHRDRESVLAS+GSENELVKCLECSERGRKV G+MGKRN  SK   +   ++S
Sbjct: 106  VFALDPSCHRDRESVLASLGSENELVKCLECSERGRKVEGIMGKRNFDSKIGLDVGKLES 165

Query: 1038 SITLNTSSLLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQS----DKIE 871
             I+ N       E                          E +KD   GA       +K E
Sbjct: 166  GISSNNQDAGTTE--------------------------EKIKDFSLGANNGGFDIEKTE 199

Query: 870  EDKVDCGNVDGN-LKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAK 694
            ED+V   +V+   +K  K+S+F YGE+ERERFNR+L++Y+GTHNFHNFTTRTKAEDP+A+
Sbjct: 200  EDEVLVQDVNQEEVKAIKKSDFRYGEEERERFNRVLQYYQGTHNFHNFTTRTKAEDPAAR 259

Query: 693  RYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQ 514
            RYIISF+A TT+NVEGIEFVKCEVIGQSFMLHQIRK+IGLAVAIMRNIAPESLIE AF Q
Sbjct: 260  RYIISFDAKTTVNVEGIEFVKCEVIGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFRQ 319

Query: 513  NVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTE 334
            +V+INVPMAPEVGLYLDECFFSSYN+KWKDSHEELSM+ YAEEAEDFKM+YIYSHIASTE
Sbjct: 320  DVDINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTE 379

Query: 333  HKDGVVALWLHSLNYRNYSDLRGLNSGQSTETK 235
            HK+GVVALWLHSLNYRNY DLR +N+  + + +
Sbjct: 380  HKEGVVALWLHSLNYRNYPDLRFINNNVNNDVE 412


>ref|XP_009778087.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Nicotiana
            sylvestris]
          Length = 596

 Score =  527 bits (1358), Expect = e-147
 Identities = 277/417 (66%), Positives = 319/417 (76%), Gaps = 9/417 (2%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFYVDPPG I+RLNS LSPQIR+FGFKRVT +FNAKKFCDRRRYVY +P
Sbjct: 113  GVSAVGQVVSGRFYVDPPGFIDRLNSILSPQIRIFGFKRVTNAFNAKKFCDRRRYVYFVP 172

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVD- 1042
            VFALDPS HRDRE+VLASVGS  ELVKCLECSERGRKVFGVMGKR     + S  V  + 
Sbjct: 173  VFALDPSSHRDRETVLASVGSGKELVKCLECSERGRKVFGVMGKRVYDPITKSVIVVAEP 232

Query: 1041 SSITLNTSSLLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEEDK 862
             ++  N  + + L+N E  V   +               TE    + +GA+ S+K EE K
Sbjct: 233  GNMPNNGDAQVTLQNIESNVNVNANDVI-----------TESNMVIENGASLSEKGEETK 281

Query: 861  VDCGNVDGNLKP----EKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAK 694
             +    D N K      + S FSYGE+E+ERFNRILK+YEGTHNFHNFTTRTKA+DP+AK
Sbjct: 282  EEVEKGDENAKAIEEQVEESVFSYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAK 341

Query: 693  RYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQ 514
            RYIISF ANT +NVEGIEFVKCEV+GQSFMLHQIRK+IGLAVAIMRN APESLI+ AF +
Sbjct: 342  RYIISFTANTIVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIQTAFRR 401

Query: 513  NVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTE 334
            +VNINVPMAPEVGLYLDECFF+SYN KWKD+HEE+S+KAY E AE+FKMKYIYSHIASTE
Sbjct: 402  DVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVSLKAYTEAAEEFKMKYIYSHIASTE 461

Query: 333  HKDGVVALWLHSLNYRNYSDLRGL----NSGQSTETKCDEFVDNCQSTGVKHNEAVD 175
            HKDG +ALWLHSLNYRNY DLRG+    ++G S  +K  E V       VK+ E+ D
Sbjct: 462  HKDGTMALWLHSLNYRNYPDLRGVDNDNSAGASDGSKAIEAVVEAGIGAVKNGESTD 518


>ref|XP_009589249.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Nicotiana tomentosiformis]
          Length = 596

 Score =  525 bits (1353), Expect = e-146
 Identities = 275/417 (65%), Positives = 316/417 (75%), Gaps = 9/417 (2%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFYVDPPG I+RLNS LSPQIR+FGFKRVT +FNAKKFCDRRRYVY +P
Sbjct: 113  GVSAVGQVVSGRFYVDPPGFIDRLNSILSPQIRIFGFKRVTNAFNAKKFCDRRRYVYFVP 172

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFALDPS HRDRE+VLASVGS  ELVKCLECSERGRKVFGVMGKR     + S  V  + 
Sbjct: 173  VFALDPSSHRDRETVLASVGSGKELVKCLECSERGRKVFGVMGKRVFDPITKSVIVVAEP 232

Query: 1038 SITLNTSSL-LELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEEDK 862
                NT    L L+N E  V   +               TE    + +GA+ S+K+EE K
Sbjct: 233  CNMPNTGDAQLTLQNTESNVNVNANDVI-----------TESNMVIENGASVSEKVEETK 281

Query: 861  VDCGNVDGNLKPEKR----SEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAK 694
             +    D N K  +     S F YGE+E+ERFNRILK+YEGTHNFHNFTTRTKA+DP+AK
Sbjct: 282  EEVEKGDENAKTVEEQVEESVFCYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAK 341

Query: 693  RYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQ 514
            RYIISF ANT +NVE IEFVKCEV+GQSFMLHQIRK+IGLAVAIMRN APESLI+ AF +
Sbjct: 342  RYIISFTANTIVNVESIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIQTAFRR 401

Query: 513  NVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTE 334
            +VNINVPMAPEVGLYLDECFF+SYN KWKD+HEE+S+KAY+E AE+FKMKYIYSHIASTE
Sbjct: 402  DVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVSLKAYSEAAEEFKMKYIYSHIASTE 461

Query: 333  HKDGVVALWLHSLNYRNYSDLRGLNSGQST----ETKCDEFVDNCQSTGVKHNEAVD 175
            HKDG +ALWLHSLNYRNY DLR +++G S      +K  E V       VK+ E+ +
Sbjct: 462  HKDGTMALWLHSLNYRNYPDLRAVDNGNSAGAGDGSKAVEAVVEAGVGAVKNGESTE 518


>emb|CBI18897.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  506 bits (1303), Expect = e-140
 Identities = 262/391 (67%), Positives = 302/391 (77%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPGL+ERLNSNL PQIR+FGFKRVT SFNAKKFCDRRRYVYLIP
Sbjct: 46   GVSAVGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIP 105

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFALDPS H DRESVLASVGSENELVKCLECSERGRKV G+MGKR   SK          
Sbjct: 106  VFALDPSSHPDRESVLASVGSENELVKCLECSERGRKVVGIMGKRKGESK---------- 155

Query: 1038 SITLNTSSLLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEEDKV 859
                N   L    NDE  +V +                T    ++    + S+ I+E+  
Sbjct: 156  ----NIVQLGIPSNDEAAIVNSEVQEEIKA--------TSNNNNIDANNSISETIKEEAA 203

Query: 858  DCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIIS 679
               + +G  K EK S F YG++ERERFNRIL  Y GTHNFHNFTTR KAEDPSA+R+I+S
Sbjct: 204  KLSS-EGENKLEKGSGFCYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVS 262

Query: 678  FNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNIN 499
            F+ NT + VEGIEFVKCEV+GQSFMLHQIRK+IGLAVAIMRN+APESL+E A  ++VNIN
Sbjct: 263  FDGNTIVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNIN 322

Query: 498  VPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGV 319
            VP APEVGLYLDECFFSSYNKKW+DSHEE+SMKAYAEEAE+FKMK++YSHIA+TEHK+GV
Sbjct: 323  VPTAPEVGLYLDECFFSSYNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGV 382

Query: 318  VALWLHSLNYRNYSDLRGLNSGQSTETKCDE 226
            VALWLHSLN+RNY DL   ++G +++ K  E
Sbjct: 383  VALWLHSLNHRNYPDLCIGDNGAASDGKNGE 413


>ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028255|gb|ESW26895.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 556

 Score =  506 bits (1303), Expect = e-140
 Identities = 261/412 (63%), Positives = 307/412 (74%), Gaps = 24/412 (5%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPGL++RLNSNL  QIR+FG+KRVTGSFNAKKFCDRRRYVYLIP
Sbjct: 84   GVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIP 143

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFALDP CHRDRE+V+AS+GS NELVKCLECSERGRKV G++G R      + EA+ V++
Sbjct: 144  VFALDPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRK--HNLELEAMDVEA 201

Query: 1038 SITLNTSSLLE------------------------LENDEKIVVKTSEXXXXXXXXXXNK 931
             I+ NT  +L+                        ++N  K++V  +            +
Sbjct: 202  GISSNTDVVLDSVVTGDVEASLSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEKGIPVQ 261

Query: 930  FNTEPVKDLGDGAAQSDKIEEDKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEG 751
                P+   G+    SD IEE+K++     G  K    S F YGE+ERERFN+IL  + G
Sbjct: 262  DEVMPLN--GESVNNSDIIEEEKMN-----GEDKSTSGSMFCYGEKERERFNKILNCFVG 314

Query: 750  THNFHNFTTRTKAEDPSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLA 571
            THNFHNFTTRTKAEDP+A+RYIISFNANT   VEGIEFVKCEV+GQSFMLHQIRK++GLA
Sbjct: 315  THNFHNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLA 374

Query: 570  VAIMRNIAPESLIEAAFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYA 391
            VAIMRN APESLI  A +Q+VNINVP APEVGLYLDECFFSSYN+KWKDSHEELSMKAY 
Sbjct: 375  VAIMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYE 434

Query: 390  EEAEDFKMKYIYSHIASTEHKDGVVALWLHSLNYRNYSDLRGLNSGQSTETK 235
            +EAE+FKMKYIYSHI+ TE K+G VALWLHSLN+RNY DLR +N    T+ K
Sbjct: 435  KEAEEFKMKYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVNEEAITDNK 486


>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|593783723|ref|XP_007154902.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028254|gb|ESW26894.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028256|gb|ESW26896.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 586

 Score =  506 bits (1303), Expect = e-140
 Identities = 261/412 (63%), Positives = 307/412 (74%), Gaps = 24/412 (5%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPGL++RLNSNL  QIR+FG+KRVTGSFNAKKFCDRRRYVYLIP
Sbjct: 114  GVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIP 173

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFALDP CHRDRE+V+AS+GS NELVKCLECSERGRKV G++G R      + EA+ V++
Sbjct: 174  VFALDPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRK--HNLELEAMDVEA 231

Query: 1038 SITLNTSSLLE------------------------LENDEKIVVKTSEXXXXXXXXXXNK 931
             I+ NT  +L+                        ++N  K++V  +            +
Sbjct: 232  GISSNTDVVLDSVVTGDVEASLSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEKGIPVQ 291

Query: 930  FNTEPVKDLGDGAAQSDKIEEDKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEG 751
                P+   G+    SD IEE+K++     G  K    S F YGE+ERERFN+IL  + G
Sbjct: 292  DEVMPLN--GESVNNSDIIEEEKMN-----GEDKSTSGSMFCYGEKERERFNKILNCFVG 344

Query: 750  THNFHNFTTRTKAEDPSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLA 571
            THNFHNFTTRTKAEDP+A+RYIISFNANT   VEGIEFVKCEV+GQSFMLHQIRK++GLA
Sbjct: 345  THNFHNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLA 404

Query: 570  VAIMRNIAPESLIEAAFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYA 391
            VAIMRN APESLI  A +Q+VNINVP APEVGLYLDECFFSSYN+KWKDSHEELSMKAY 
Sbjct: 405  VAIMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYE 464

Query: 390  EEAEDFKMKYIYSHIASTEHKDGVVALWLHSLNYRNYSDLRGLNSGQSTETK 235
            +EAE+FKMKYIYSHI+ TE K+G VALWLHSLN+RNY DLR +N    T+ K
Sbjct: 465  KEAEEFKMKYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVNEEAITDNK 516


>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Glycine max]
          Length = 518

 Score =  506 bits (1302), Expect = e-140
 Identities = 261/393 (66%), Positives = 305/393 (77%), Gaps = 13/393 (3%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPGL++RLNSNL  QIR+FG+KRVT SFNAKKFCDRRRYVYLIP
Sbjct: 81   GVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIP 140

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFALDPSCHRDRE+V+AS+GS NELVKCLECSERGRKV G++G R      + EAV V++
Sbjct: 141  VFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRK--QNLELEAVDVEA 198

Query: 1038 SITLNTSS--------LLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLG-----D 898
             I+ N  S         L   +D  +  ++                  PV++ G     +
Sbjct: 199  GISSNRDSGVTEDVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGE 258

Query: 897  GAAQSDKIEEDKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRT 718
                SD +EE+KV+     G  KP   S F YGE+ERERFN+ILK + GTHNFHNFTTRT
Sbjct: 259  SVNNSDILEEEKVN-----GEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRT 313

Query: 717  KAEDPSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPES 538
            KAEDP+A+RYIISFNANTT+ VEG+EFVKCEV+GQSFMLHQIRK+IGLAVAIMRN APES
Sbjct: 314  KAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPES 373

Query: 537  LIEAAFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYI 358
            LI+ A +Q+VNINVP APEVGLYLDECFF+SYN+KWKD HEELSMKAY +EA++FKMKYI
Sbjct: 374  LIDEALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYI 432

Query: 357  YSHIASTEHKDGVVALWLHSLNYRNYSDLRGLN 259
            YSHIASTE K+G VALWLHSLN+RNY DLR +N
Sbjct: 433  YSHIASTEQKEGTVALWLHSLNHRNYPDLRVIN 465


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 548

 Score =  506 bits (1302), Expect = e-140
 Identities = 261/393 (66%), Positives = 305/393 (77%), Gaps = 13/393 (3%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPGL++RLNSNL  QIR+FG+KRVT SFNAKKFCDRRRYVYLIP
Sbjct: 111  GVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIP 170

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFALDPSCHRDRE+V+AS+GS NELVKCLECSERGRKV G++G R      + EAV V++
Sbjct: 171  VFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRK--QNLELEAVDVEA 228

Query: 1038 SITLNTSS--------LLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLG-----D 898
             I+ N  S         L   +D  +  ++                  PV++ G     +
Sbjct: 229  GISSNRDSGVTEDVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGE 288

Query: 897  GAAQSDKIEEDKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRT 718
                SD +EE+KV+     G  KP   S F YGE+ERERFN+ILK + GTHNFHNFTTRT
Sbjct: 289  SVNNSDILEEEKVN-----GEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRT 343

Query: 717  KAEDPSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPES 538
            KAEDP+A+RYIISFNANTT+ VEG+EFVKCEV+GQSFMLHQIRK+IGLAVAIMRN APES
Sbjct: 344  KAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPES 403

Query: 537  LIEAAFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYI 358
            LI+ A +Q+VNINVP APEVGLYLDECFF+SYN+KWKD HEELSMKAY +EA++FKMKYI
Sbjct: 404  LIDEALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYI 462

Query: 357  YSHIASTEHKDGVVALWLHSLNYRNYSDLRGLN 259
            YSHIASTE K+G VALWLHSLN+RNY DLR +N
Sbjct: 463  YSHIASTEQKEGTVALWLHSLNHRNYPDLRVIN 495


>gb|KHN42806.1| tRNA pseudouridine synthase 1 [Glycine soja]
          Length = 552

 Score =  504 bits (1297), Expect = e-140
 Identities = 260/393 (66%), Positives = 304/393 (77%), Gaps = 13/393 (3%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPGL++RLNSNL  QIR+FG+KRVT SFNAKKFCDRRRYVYLIP
Sbjct: 115  GVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIP 174

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFALDPSCHRDRE+V+AS+GS NELVKCLECSERGRKV G++G R      + EAV V++
Sbjct: 175  VFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRK--QNLELEAVDVEA 232

Query: 1038 SITLNTSS--------LLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLG-----D 898
             I+ N  S         L   +D  +  ++                  PV++ G     +
Sbjct: 233  GISSNRDSGVTEDVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGE 292

Query: 897  GAAQSDKIEEDKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRT 718
                SD +EE+KV+     G  KP   S F YGE+ERERFN+ILK + GTHNFHNFTTRT
Sbjct: 293  SVNNSDILEEEKVN-----GEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRT 347

Query: 717  KAEDPSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPES 538
            KAEDP+A+RYIISFNANTT+ VEG+EFVKCEV+GQSFMLHQIRK+IGLAVAIMRN APES
Sbjct: 348  KAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPES 407

Query: 537  LIEAAFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYI 358
            LI+ A +Q+VNINVP APEVGLYLDECFF+SYN+KWKD HEELSMKAY +EA++FKMKYI
Sbjct: 408  LIDEALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYI 466

Query: 357  YSHIASTEHKDGVVALWLHSLNYRNYSDLRGLN 259
            YSHIASTE K+G VALWLHSLN+RNY DL  +N
Sbjct: 467  YSHIASTEQKEGTVALWLHSLNHRNYPDLHVIN 499


>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
            gi|550339814|gb|EEE94755.2| hypothetical protein
            POPTR_0005s26830g [Populus trichocarpa]
          Length = 497

 Score =  503 bits (1294), Expect = e-139
 Identities = 253/384 (65%), Positives = 305/384 (79%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPGL+ERL+SNLSPQIR+FG+KRVTGSFNAKKFCDRRRYVYLIP
Sbjct: 115  GVSAVGQVVSGRFYIDPPGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIP 174

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFAL+P  HRDRESVLAS+GS +ELVKCL+CSERGRKV G +GKR+  SKSD     + S
Sbjct: 175  VFALNPCSHRDRESVLASLGSGSELVKCLQCSERGRKVVGAVGKRSFESKSDVSPTEIWS 234

Query: 1038 SITLNTSSLLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEEDKV 859
            +   +  + L+ E  E++ + ++            +   E +  + +G  ++ K EE+ +
Sbjct: 235  N---DKDTTLKSEIKEEVSISSNSEDANANP----EIKDEIMVSIENGDDKNTKSEEEAI 287

Query: 858  DCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIIS 679
                        K S F YGE+E+ERFNRIL +Y G+HNFHNFTTRTKAEDPSA+RYIIS
Sbjct: 288  ------------KGSGFCYGEKEKERFNRILNYYLGSHNFHNFTTRTKAEDPSAQRYIIS 335

Query: 678  FNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNIN 499
            F+A TT+ VEGIEFVKCEV+GQSFMLHQIRK+IG+AVAIMRN A ESLI+ A ++NVNIN
Sbjct: 336  FDAKTTVAVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCASESLIQTALQKNVNIN 395

Query: 498  VPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGV 319
            VP APEVGLYLDECFF+SYN+KWKDSHEELSMK Y EEAE+FKMK+IYSHIA+TEHK+G 
Sbjct: 396  VPTAPEVGLYLDECFFTSYNQKWKDSHEELSMKDYEEEAEEFKMKHIYSHIATTEHKEGS 455

Query: 318  VALWLHSLNYRNYSDLRGLNSGQS 247
            VALWLHSLN+RNY DLR  ++G +
Sbjct: 456  VALWLHSLNHRNYPDLRACDNGDN 479


>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|508726926|gb|EOY18823.1|
            Pseudouridine synthase [Theobroma cacao]
          Length = 507

 Score =  502 bits (1293), Expect = e-139
 Identities = 258/408 (63%), Positives = 307/408 (75%), Gaps = 4/408 (0%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPGL+ERLN  L  QIR+FG+KRVT SFN+KKFCDRRRYVYLIP
Sbjct: 119  GVSAVGQVVSGRFYIDPPGLVERLNRILPAQIRIFGYKRVTASFNSKKFCDRRRYVYLIP 178

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFALDPSCHRDRESVLAS+GS NELVKCLECSERGRKV GVMGKR+  +KS      V S
Sbjct: 179  VFALDPSCHRDRESVLASLGSGNELVKCLECSERGRKVAGVMGKRSFEAKS----TIVHS 234

Query: 1038 SITLNTSSLLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEEDKV 859
             ++ N      +  +  +                    T  ++++ D + Q++  E DKV
Sbjct: 235  DVSSNNGESGNVIKEHNL--------------------TSELEEVTDSSVQNEFTEVDKV 274

Query: 858  DCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIIS 679
            +   +     P +   F YGE+E+  FNRILK Y G+HNFHNFTTRTKAEDPSA+RYI+S
Sbjct: 275  NVEKI-----PLEERRFCYGEEEKGLFNRILKHYVGSHNFHNFTTRTKAEDPSARRYIVS 329

Query: 678  FNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNIN 499
            F+ANT +NVEGI+FVKCEV+GQSFMLHQIRK+IG+AVA+MRN APESLIE A  ++V+IN
Sbjct: 330  FHANTVVNVEGIDFVKCEVVGQSFMLHQIRKMIGMAVAVMRNCAPESLIETALRKDVSIN 389

Query: 498  VPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGV 319
            VP APEVGLYLDEC F+SYN+KWKDSHEELSMKAY EEAE+FKMK+IYSHIASTE ++GV
Sbjct: 390  VPTAPEVGLYLDECLFASYNQKWKDSHEELSMKAYEEEAEEFKMKFIYSHIASTEREEGV 449

Query: 318  VALWLHSLNYRNYSDLRGLNSG--QSTETKCDEFVDN--CQSTGVKHN 187
            VALWLHSLN+RNY DLRG N    +    K D+  DN   +S  V+ N
Sbjct: 450  VALWLHSLNHRNYPDLRGCNVEMIEGMSLKVDDNTDNTDAKSASVEKN 497


>ref|XP_008452911.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            melo] gi|659104353|ref|XP_008452912.1| PREDICTED: tRNA
            pseudouridine synthase A, mitochondrial-like [Cucumis
            melo] gi|307136307|gb|ADN34131.1| tRNA pseudouridine
            synthase family protein [Cucumis melo subsp. melo]
          Length = 519

 Score =  501 bits (1289), Expect = e-139
 Identities = 253/385 (65%), Positives = 300/385 (77%), Gaps = 8/385 (2%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPG ++RLNSNLSPQIR+FG+KRVT SFNAKKFCDRRRYVYLIP
Sbjct: 116  GVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIP 175

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFALDP+CHRDRESV AS+GS+NELVKCLECSERGRKV G+MGKRN   K+      + S
Sbjct: 176  VFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTAITESDISS 235

Query: 1038 SITLNTSSLLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIE---- 871
            +I +N   + +++ +  +    +            +     +    +G A+S+  E    
Sbjct: 236  NI-VNAIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELTVASEGIAKSESSEMSGL 294

Query: 870  ----EDKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDP 703
                E  V   +V+G  KP     F YGE+E+ RFNRILK Y GTHNFHNFTTRTKAEDP
Sbjct: 295  GNDSEIVVSKESVNGKEKPS--GSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDP 352

Query: 702  SAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAA 523
            +A+R+I+SF+A+TT+ VEGIEFVKCEV+GQSFMLHQIRK++GLAVAIMRN APESLIE A
Sbjct: 353  AARRFIVSFDASTTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKA 412

Query: 522  FEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIA 343
             +++VNINVP APEVGLYLDEC F+SYN+KWKD+HEE+SMKAY E AEDFKMK IYSHIA
Sbjct: 413  LQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEVAEDFKMKQIYSHIA 472

Query: 342  STEHKDGVVALWLHSLNYRNYSDLR 268
            STEHKDG VALWLHSLN+RNY DLR
Sbjct: 473  STEHKDGAVALWLHSLNHRNYPDLR 497


>ref|XP_008221186.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Prunus mume]
          Length = 532

 Score =  499 bits (1284), Expect = e-138
 Identities = 261/409 (63%), Positives = 307/409 (75%), Gaps = 15/409 (3%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFYVDPPG ++RLNSN+SPQIR+FG+KRVT SFNAKKFCDRRRYVYLIP
Sbjct: 110  GVSAVGQVVSGRFYVDPPGFVDRLNSNISPQIRIFGYKRVTASFNAKKFCDRRRYVYLIP 169

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFALDPS HRDRESVLAS+GS+ E VKCLECSERGRKV G+MGKRN   +  S  + + S
Sbjct: 170  VFALDPSAHRDRESVLASLGSDKEFVKCLECSERGRKVGGLMGKRNYELRGTSFGLDISS 229

Query: 1038 SITLNTSSLLELE-NDEKIVVKTSEXXXXXXXXXXNKFNTEP---------VKDLGDGAA 889
            +      S++E E N+E  V   +           N+ +T           V+D  D   
Sbjct: 230  N---TNESMVESEFNEETKVSPDNAGGDDSKSEPKNEISTSSNNNGVSGVEVEDSEDTDL 286

Query: 888  QSDKIEED-KVDCG--NVDGNLKPEKRS--EFSYGEQERERFNRILKFYEGTHNFHNFTT 724
             S+ + +  KV  G  N +G  KPEK S  EF YGE+E++RFNRIL  YEGTHNFHNFTT
Sbjct: 287  NSEPLNDTTKVSVGEENANGEEKPEKGSGSEFCYGEKEKDRFNRILNCYEGTHNFHNFTT 346

Query: 723  RTKAEDPSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAP 544
            RTKA DP+A RYIISFNANTT+ V G++FVKCEV+GQSFMLHQIRK+IGLAVAI RN AP
Sbjct: 347  RTKAADPAAWRYIISFNANTTVTVGGMDFVKCEVVGQSFMLHQIRKMIGLAVAIFRNCAP 406

Query: 543  ESLIEAAFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMK 364
            +SL+E A +++VN+NVP APEVGLYLDECFF+SYN+KW DSHEELSMK Y +EAEDFKMK
Sbjct: 407  DSLLEIALQKDVNVNVPTAPEVGLYLDECFFASYNQKWGDSHEELSMKDYEQEAEDFKMK 466

Query: 363  YIYSHIASTEHKDGVVALWLHSLNYRNYSDLRGLNSGQSTETKCDEFVD 217
            +IY HIASTE K+GVV LWLHSLN+RNY DL    +     T  +E VD
Sbjct: 467  HIYPHIASTEQKEGVVGLWLHSLNHRNYPDLCTTGADNDGNTSNEESVD 515


>ref|XP_011003107.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
            mitochondrial [Populus euphratica]
          Length = 538

 Score =  498 bits (1282), Expect = e-138
 Identities = 255/412 (61%), Positives = 307/412 (74%), Gaps = 28/412 (6%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPGL+ERL+SNLSPQIR+FG+KRVTGSFNAKKFCDRRRYVYLIP
Sbjct: 115  GVSAVGQVVSGRFYIDPPGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIP 174

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFAL+P  HRDRESVLAS+GS +ELVKCL+CSERGRKV G +GKR+  SKSD     + S
Sbjct: 175  VFALNPCSHRDRESVLASLGSGSELVKCLQCSERGRKVVGAVGKRSFESKSDVSPTEIWS 234

Query: 1038 SITLNTSSLLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDL----GDGAAQSDKIE 871
            +   +T+   E++ +   ++   +             N+EPV +      + + +  +  
Sbjct: 235  N-DKDTTLKYEIKEEVSGLMDNGDGDIR---------NSEPVDETKVFQNEDSGKKSETT 284

Query: 870  EDKVDCGNVDGNLKPE------------------------KRSEFSYGEQERERFNRILK 763
            E  +   + D N  PE                        K S F YGE+E+ERFNRIL 
Sbjct: 285  ESGISSNSEDANANPEIKDEMMVSIENGDDKNTKSEEEAIKGSGFCYGEKEKERFNRILN 344

Query: 762  FYEGTHNFHNFTTRTKAEDPSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKL 583
            +Y G+HNFHNFTTRTKAEDPSA+RYIISF+A TT+ VEGIEFVKCEV+GQSFMLHQIRK+
Sbjct: 345  YYVGSHNFHNFTTRTKAEDPSAQRYIISFDAKTTVTVEGIEFVKCEVVGQSFMLHQIRKM 404

Query: 582  IGLAVAIMRNIAPESLIEAAFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSM 403
            IG+AVAIMRN A ESLI+ A ++NVNINVP APEVGLYLDECFF+SYN+KWKDSHEELSM
Sbjct: 405  IGVAVAIMRNCASESLIQTALQKNVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEELSM 464

Query: 402  KAYAEEAEDFKMKYIYSHIASTEHKDGVVALWLHSLNYRNYSDLRGLNSGQS 247
            K Y EEAE+FKM++IYSHIA+TEHK+G VALWLHSLNY NY DLR  ++G +
Sbjct: 465  KDYEEEAEEFKMQHIYSHIATTEHKEGSVALWLHSLNYXNYPDLRVCDNGDN 516


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            sativus] gi|700200317|gb|KGN55475.1| hypothetical protein
            Csa_4G652870 [Cucumis sativus]
          Length = 519

 Score =  498 bits (1282), Expect = e-138
 Identities = 251/386 (65%), Positives = 302/386 (78%), Gaps = 9/386 (2%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPG ++RLNSNLSPQIR+FG+KRVT SFNAKKFCDRRRYVYLIP
Sbjct: 116  GVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIP 175

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFALDP+CHRDRESV AS+GS+NELVKCLECSERGRKV G++GKRN   K+       +S
Sbjct: 176  VFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKT----AITES 231

Query: 1038 SITLNTSSLLELENDEK--IVVKTSEXXXXXXXXXXNKFNTEPVKDLG-DGAAQSDKIE- 871
             I+ NT + +E+ + +   ++  ++              NT    ++G +G A+S+  E 
Sbjct: 232  DISSNTVNAIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSESSEM 291

Query: 870  -----EDKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAED 706
                 + ++       N K +    F YGE+E+ RFNRILK Y GTHNFHNFTTRTKAED
Sbjct: 292  SGLGSDSEIVVSKESVNGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAED 351

Query: 705  PSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEA 526
            P+A+R+I+SF+A+  + VEGIEFVKCEV+GQSFMLHQIRK++GLAVAIMRN APESLIE 
Sbjct: 352  PAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEK 411

Query: 525  AFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHI 346
            A +++VNINVP APEVGLYLDEC F+SYN+KWKD+HEE+SMKAY E AEDFKMK IYSHI
Sbjct: 412  ALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHI 471

Query: 345  ASTEHKDGVVALWLHSLNYRNYSDLR 268
            ASTEHKDG VALWLHSLN+RNY DLR
Sbjct: 472  ASTEHKDGAVALWLHSLNHRNYPDLR 497


>ref|XP_010064573.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Eucalyptus
            grandis] gi|629102556|gb|KCW68025.1| hypothetical protein
            EUGRSUZ_F01708 [Eucalyptus grandis]
          Length = 553

 Score =  498 bits (1281), Expect = e-138
 Identities = 262/414 (63%), Positives = 305/414 (73%), Gaps = 23/414 (5%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPGL++RLNSNL+PQIR+FG+KR T SF+AKKFCDRRRYVYLIP
Sbjct: 140  GVSAVGQVVSGRFYIDPPGLVDRLNSNLNPQIRIFGYKRATASFSAKKFCDRRRYVYLIP 199

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKS--------- 1066
            VFALDPS HRDRESV AS+GS NELVKCLECSERGRKV GVMGKRN   +          
Sbjct: 200  VFALDPSSHRDRESVAASLGSGNELVKCLECSERGRKVVGVMGKRNFELRGHVSDSNGCE 259

Query: 1065 ----DSEAVSVDSSITLNTS-SLLELENDEKIVVKTSEXXXXXXXXXXN-KFNTEPVKD- 907
                DS    V+S IT N   + +  E  E IV  +S             K +T  + D 
Sbjct: 260  EATVDSVDAKVESGITSNDCCAFMGNEGKEGIVDSSSNGIDDKSISDVIDKVDTSTMVDT 319

Query: 906  ---LGDGAAQSDKIE----EDKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGT 748
               +    A SD       + K+    V+G  KP K SEF YGE+ +ERFNRIL +Y G+
Sbjct: 320  VVSVDSAPADSDTGSVLNLDGKIAETIVNGEEKPVKGSEFCYGEEMKERFNRILGYYVGS 379

Query: 747  HNFHNFTTRTKAEDPSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAV 568
            HNFHNFTTRTKAEDPSA+RYI+SFN +T + VEG+EFVKCEV+GQSFMLHQIRK++GLAV
Sbjct: 380  HNFHNFTTRTKAEDPSARRYILSFNGDTVVTVEGMEFVKCEVVGQSFMLHQIRKMMGLAV 439

Query: 567  AIMRNIAPESLIEAAFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAE 388
            AIMRN APE+LI  A +++V +NVP APEVGLYLDECFF+SYN KWKDSHEELSMK Y +
Sbjct: 440  AIMRNCAPETLIVNALQKDVKVNVPTAPEVGLYLDECFFTSYNNKWKDSHEELSMKDYEK 499

Query: 387  EAEDFKMKYIYSHIASTEHKDGVVALWLHSLNYRNYSDLRGLNSGQSTETKCDE 226
            EAEDFKMK+IY HIA TEHK+GVVALWLHSLN+RNY DLR  +  + TE K  E
Sbjct: 500  EAEDFKMKHIYPHIALTEHKEGVVALWLHSLNHRNYPDLRAGDKQELTENKSSE 553


>ref|XP_010266077.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X2
            [Nelumbo nucifera]
          Length = 475

 Score =  497 bits (1279), Expect = e-137
 Identities = 247/380 (65%), Positives = 296/380 (77%), Gaps = 3/380 (0%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPGL++RLNSNL  QIR+FGFKRVT SFNAKKFCDRRRYVYLIP
Sbjct: 95   GVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGFKRVTSSFNAKKFCDRRRYVYLIP 154

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDS 1039
            VFALDPS HRDRESVLAS+GSENELVKCLECSERGRKV GVMG+RN  SK+     +  S
Sbjct: 155  VFALDPSSHRDRESVLASLGSENELVKCLECSERGRKVAGVMGRRNSESKNVENGGNDAS 214

Query: 1038 SITLNTSSLLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQS---DKIEE 868
               L + +++ + +  +  ++                  +P     D +A +   ++ ++
Sbjct: 215  QSGLTSDNVITVLSHSETKIEPEVSSIDAVALSNFALAVDPCLVSSDNSAAAPHPEQADQ 274

Query: 867  DKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRY 688
            + V CGN  G     K   F YGE+E+ERFNRILK YEGTHNFHNFTTRTK EDPSA RY
Sbjct: 275  NLVRCGNGGG--AAVKGRVFCYGEKEKERFNRILKHYEGTHNFHNFTTRTKVEDPSANRY 332

Query: 687  IISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNV 508
            I+SF+AN  + VEGI+FVKCEV+GQSFMLHQIRK++GLAVA+MRN APESLI  A ++++
Sbjct: 333  IVSFDANKVVTVEGIDFVKCEVVGQSFMLHQIRKMVGLAVAVMRNCAPESLINIALQKDI 392

Query: 507  NINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHK 328
            NINVP APEVGLYLDEC F+SYN+KWKDSHEE+SM+AY EEAEDFK++ IY+HI+ TE K
Sbjct: 393  NINVPTAPEVGLYLDECLFTSYNQKWKDSHEEISMEAYKEEAEDFKIQQIYTHISFTEQK 452

Query: 327  DGVVALWLHSLNYRNYSDLR 268
            +GVVALWLHSLN+RNY DLR
Sbjct: 453  EGVVALWLHSLNHRNYPDLR 472


>ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X2
            [Cicer arietinum]
          Length = 475

 Score =  494 bits (1271), Expect = e-137
 Identities = 255/394 (64%), Positives = 303/394 (76%), Gaps = 4/394 (1%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPG ++RLNSNL  QIR+FG+KRVT SF+AKKFCDRRRYVYLIP
Sbjct: 85   GVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRYVYLIP 144

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMG--KRNLHSKS-DSEAVS 1048
            VFALDP CHRDRE+VLAS+GSENELVKCLECSERGRKV G++G  KRNL  ++ D E   
Sbjct: 145  VFALDPCCHRDRETVLASLGSENELVKCLECSERGRKVEGLVGNSKRNLELEAMDVETTD 204

Query: 1047 VDSSITLNTSSLLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEE 868
                   N  S+ +  N+ K+ V+              +    P+   G     S  +EE
Sbjct: 205  KGDDNRSNKESIND--NEGKVSVEDVNSKTSFETVVSGQDEVSPLN--GGSENNSAVLEE 260

Query: 867  DKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRY 688
            +KV+     G   P KRSEF YGE+ERERFN+ILK Y GTHNFHNFTTR K EDPSAKR+
Sbjct: 261  EKVN-----GEDTPAKRSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRF 315

Query: 687  IISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNV 508
            IISF+A+ T+ +EG+EFVKCE++GQSFMLHQIRK++GLAVAIMRN APESLIE A + +V
Sbjct: 316  IISFDASNTVVIEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQTDV 375

Query: 507  NINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHK 328
            +I VP APEVGLYLDECFF+SYN+KWKD+HEE+SMKAY +EAEDFKMK+IYSHIASTE K
Sbjct: 376  SITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMKFIYSHIASTEQK 435

Query: 327  DGVVALWLHSLNYRNYSDLRGL-NSGQSTETKCD 229
            +G V LWLHSLN+RNYSDLR +   G + E K +
Sbjct: 436  EGTVGLWLHSLNHRNYSDLRVVEEEGVANEKKSE 469


>ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X1
            [Cicer arietinum]
          Length = 505

 Score =  494 bits (1271), Expect = e-137
 Identities = 255/394 (64%), Positives = 303/394 (76%), Gaps = 4/394 (1%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQVVSGRFY+DPPG ++RLNSNL  QIR+FG+KRVT SF+AKKFCDRRRYVYLIP
Sbjct: 115  GVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRYVYLIP 174

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMG--KRNLHSKS-DSEAVS 1048
            VFALDP CHRDRE+VLAS+GSENELVKCLECSERGRKV G++G  KRNL  ++ D E   
Sbjct: 175  VFALDPCCHRDRETVLASLGSENELVKCLECSERGRKVEGLVGNSKRNLELEAMDVETTD 234

Query: 1047 VDSSITLNTSSLLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEE 868
                   N  S+ +  N+ K+ V+              +    P+   G     S  +EE
Sbjct: 235  KGDDNRSNKESIND--NEGKVSVEDVNSKTSFETVVSGQDEVSPLN--GGSENNSAVLEE 290

Query: 867  DKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRY 688
            +KV+     G   P KRSEF YGE+ERERFN+ILK Y GTHNFHNFTTR K EDPSAKR+
Sbjct: 291  EKVN-----GEDTPAKRSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRF 345

Query: 687  IISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNV 508
            IISF+A+ T+ +EG+EFVKCE++GQSFMLHQIRK++GLAVAIMRN APESLIE A + +V
Sbjct: 346  IISFDASNTVVIEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQTDV 405

Query: 507  NINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHK 328
            +I VP APEVGLYLDECFF+SYN+KWKD+HEE+SMKAY +EAEDFKMK+IYSHIASTE K
Sbjct: 406  SITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMKFIYSHIASTEQK 465

Query: 327  DGVVALWLHSLNYRNYSDLRGL-NSGQSTETKCD 229
            +G V LWLHSLN+RNYSDLR +   G + E K +
Sbjct: 466  EGTVGLWLHSLNHRNYSDLRVVEEEGVANEKKSE 499


>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 584

 Score =  493 bits (1269), Expect = e-136
 Identities = 263/434 (60%), Positives = 310/434 (71%), Gaps = 39/434 (8%)
 Frame = -1

Query: 1398 GVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIP 1219
            GVSAVGQV+SGRFYVDPPGL++RLNS L  QIR+FG+KRVT SFNAKKFCDRRRYVYLIP
Sbjct: 115  GVSAVGQVISGRFYVDPPGLVDRLNSILPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIP 174

Query: 1218 VFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSV-- 1045
            VFALDPS HRDRESVLAS+GS +ELVKCLECSERGRKV G +GKR+  SKS++    +  
Sbjct: 175  VFALDPSSHRDRESVLASLGSGDELVKCLECSERGRKVIGAVGKRSFESKSEAFQTDILL 234

Query: 1044 -------------DSSITLNTSSLLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDL 904
                         D S++++ +  + + ++   V +T+               T+ + + 
Sbjct: 235  NGGCAIANCEIKEDISMSMDNAHGVRMHSE--FVEQTNVSHNEDSETESAMPRTDILSNS 292

Query: 903  GDGAAQSDK------IEEDKVDCGN------------------VDGNLKPEKRSEFSYGE 796
             DG  +SD       + ED  D GN                  V+G     K SEF YGE
Sbjct: 293  EDGNVKSDSKQEEVMVSEDAADGGNKESETMEKDSKASVGEERVNGEEHVMKGSEFCYGE 352

Query: 795  QERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIISFNANTTINVEGIEFVKCEVIG 616
            +E+E+FNRILK+Y G+HNFHNFTTRTKAEDPSA+RYIISF+A TT+ VEGIEFVKCEVIG
Sbjct: 353  EEKEKFNRILKYYVGSHNFHNFTTRTKAEDPSAQRYIISFDARTTVTVEGIEFVKCEVIG 412

Query: 615  QSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNINVPMAPEVGLYLDECFFSSYNK 436
            QSFMLHQIRK+IGLAVAIMRN APESLI  A +++V INVP APEVGLYLDECFF+SYN+
Sbjct: 413  QSFMLHQIRKMIGLAVAIMRNCAPESLISTALQKDVKINVPTAPEVGLYLDECFFTSYNQ 472

Query: 435  KWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGVVALWLHSLNYRNYSDLRGLNS 256
            KWKD HEEL MK Y E AEDFKMKYIYSHIASTE K+GVV LWLHSLNYRNY DLR   +
Sbjct: 473  KWKD-HEELCMKDYEEVAEDFKMKYIYSHIASTEQKEGVVGLWLHSLNYRNYPDLRFCYT 531

Query: 255  GQSTETKCDEFVDN 214
              +   K  E V+N
Sbjct: 532  LDANNEKSTEVVNN 545