BLASTX nr result
ID: Forsythia23_contig00030733
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00030733
(383 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011082531.1| PREDICTED: putative E3 ubiquitin-protein lig... 92 1e-16
ref|XP_008234929.1| PREDICTED: putative E3 ubiquitin-protein lig... 65 2e-08
ref|XP_010242548.1| PREDICTED: putative E3 ubiquitin-protein lig... 64 3e-08
ref|XP_007201686.1| hypothetical protein PRUPE_ppa022819mg [Prun... 60 8e-07
ref|XP_009614905.1| PREDICTED: putative E3 ubiquitin-protein lig... 57 4e-06
ref|XP_004290694.1| PREDICTED: putative E3 ubiquitin-protein lig... 57 5e-06
ref|XP_008360889.1| PREDICTED: putative E3 ubiquitin-protein lig... 57 6e-06
ref|XP_008360888.1| PREDICTED: putative E3 ubiquitin-protein lig... 57 6e-06
ref|XP_008360887.1| PREDICTED: putative E3 ubiquitin-protein lig... 57 6e-06
>ref|XP_011082531.1| PREDICTED: putative E3 ubiquitin-protein ligase RF4 [Sesamum
indicum] gi|747071335|ref|XP_011082532.1| PREDICTED:
putative E3 ubiquitin-protein ligase RF4 [Sesamum
indicum]
Length = 836
Score = 92.4 bits (228), Expect = 1e-16
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 3/129 (2%)
Frame = -2
Query: 382 ACAVERDPSGSIGGICGPEVPGGNSESTFPESKPEVLDTSHSNSNKPHNPKQSI---QNS 212
AC VE G +GG G E G+ + +SK E TS +++NK NPKQ++ Q+S
Sbjct: 214 ACVVE---GGPLGGSSGQEAQRGSPRLS--QSKSETSSTSQADTNKLDNPKQTMPRAQSS 268
Query: 211 QPENLIAGAVSRLPNSKNSRPSEMANPKKGSSSSLQDARGKFSGITREHIQTLSQATVLD 32
Q E ++G + P S + P E+A+ K S +LQ+A+GK S I REHIQT +QA V D
Sbjct: 269 QHEFPVSGPAPQ-PLSSRAAPDELASTGKEISLALQEAKGKLSVIGREHIQTSTQAMVTD 327
Query: 31 EKSGGSRKG 5
EKSGGSRKG
Sbjct: 328 EKSGGSRKG 336
>ref|XP_008234929.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Prunus mume]
Length = 681
Score = 64.7 bits (156), Expect = 2e-08
Identities = 45/135 (33%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Frame = -2
Query: 382 ACAVERDPSGSIGGICGPEVPGGNSESTFPESKPEVLDTSHSNSNK----------PHNP 233
AC E DP +IG +S ST S+ +T H N N H
Sbjct: 34 ACTSEGDPLTAIGFEESSRESSSDSSSTQLRSEATSFETIHPNPNPNQANSSMPPLSHAQ 93
Query: 232 KQSIQNSQPENLIAGAVSRLPNSKNSRPSEMANPKKGSSSSLQDARGKFSGITREHIQTL 53
+++ QN+ E L G+ +PNSK+S P+K S SS+ D+ K G T E++Q
Sbjct: 94 ERAPQNNSTEALKFGSFPNVPNSKHSHAPGGLTPEKDSLSSMLDSLEKCLGFTEEYMQNK 153
Query: 52 SQATVLDEKSGGSRK 8
SQ +EKSG RK
Sbjct: 154 SQTCTSEEKSGAVRK 168
>ref|XP_010242548.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Nelumbo
nucifera] gi|720082305|ref|XP_010242549.1| PREDICTED:
putative E3 ubiquitin-protein ligase RF298 [Nelumbo
nucifera]
Length = 893
Score = 64.3 bits (155), Expect = 3e-08
Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Frame = -2
Query: 382 ACAVERDPSGSIGGICGPEVPGGN-SESTFPESKPEVLDTSHSNSNKPHNPKQSIQNSQ- 209
ACA++ DP + G E PGG+ S +T P+ K EV ++S N P P S
Sbjct: 250 ACAMDGDP---LSGFGADEAPGGSPSVTTVPQLKTEV-NSSELNLPNPIKPNPIFPCSHG 305
Query: 208 --PENLIAGAVSRLPNSKNSRPSEMANPKKGSSSSLQDARGKFSGITREHIQTLSQATVL 35
++ + LPN +N E P+K +S+S D K SG+ E +Q SQ++V
Sbjct: 306 PHSDSPTVTGIPNLPNPRNPLVLEGLPPEKENSTSTSDGADKPSGVIGERLQMTSQSSVP 365
Query: 34 DEKSGGSRKG 5
+EKS G RKG
Sbjct: 366 EEKSVGGRKG 375
>ref|XP_007201686.1| hypothetical protein PRUPE_ppa022819mg [Prunus persica]
gi|462397086|gb|EMJ02885.1| hypothetical protein
PRUPE_ppa022819mg [Prunus persica]
Length = 800
Score = 59.7 bits (143), Expect = 8e-07
Identities = 43/135 (31%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Frame = -2
Query: 382 ACAVERDPSGSIGGICGPEVPGGNSESTFPESKPEVLDTSHSNSNK----------PHNP 233
AC E DP + +S ST S+ +T H N N H
Sbjct: 155 ACTSEGDPLSAFEE--SSRASSSDSSSTQLRSEATSFETIHPNPNPNQANSSMPPLSHAQ 212
Query: 232 KQSIQNSQPENLIAGAVSRLPNSKNSRPSEMANPKKGSSSSLQDARGKFSGITREHIQTL 53
+++ QN+ E L G+ +PNSK+S P+K S SS+ D+ K G T E++Q
Sbjct: 213 ERAPQNNSTEALKFGSFPNVPNSKHSHAPGGLTPEKDSLSSMLDSLEKCLGFTEEYMQNK 272
Query: 52 SQATVLDEKSGGSRK 8
SQ +EKSG RK
Sbjct: 273 SQTCTSEEKSGAVRK 287
>ref|XP_009614905.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Nicotiana
tomentosiformis] gi|697121848|ref|XP_009614906.1|
PREDICTED: putative E3 ubiquitin-protein ligase RF298
[Nicotiana tomentosiformis]
Length = 814
Score = 57.4 bits (137), Expect = 4e-06
Identities = 47/128 (36%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = -2
Query: 382 ACAVERDPSGSIGGICGPEVPGGNSESTFPESKPEVLDTSHSNSNKPHNPKQSIQNSQPE 203
AC VE D + +C E G + K E +T+ SN +K K SI +Q +
Sbjct: 206 ACTVEGD---ILDELCSQESLGDSL-------KTEASETTQSNPDKLQLSKPSIAIAQSK 255
Query: 202 NLIAGAVSRLPNSKNSRPSEMANPKKGSSSSLQDARGK-FSGITREHIQTLSQATVLDEK 26
+A A + P SKNS + A K GSS L +A K +R H Q S+A VL++K
Sbjct: 256 VAVASAAPQEPTSKNSHVRQAAIGK-GSSVPLPEAEAKSLPTSSRGHKQNPSKAAVLEDK 314
Query: 25 SGGSRKGS 2
SG RKGS
Sbjct: 315 SGAGRKGS 322
>ref|XP_004290694.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Fragaria
vesca subsp. vesca]
Length = 827
Score = 57.0 bits (136), Expect = 5e-06
Identities = 41/126 (32%), Positives = 65/126 (51%)
Frame = -2
Query: 382 ACAVERDPSGSIGGICGPEVPGGNSESTFPESKPEVLDTSHSNSNKPHNPKQSIQNSQPE 203
AC +E D S + +S S+ +S+ +T+H N +K ++ K S+ NSQ
Sbjct: 207 ACTMEGDLSSVLAFEESSTESSPDSSSSQLQSEANN-ETNHPNPSKENSSKPSLPNSQNH 265
Query: 202 NLIAGAVSRLPNSKNSRPSEMANPKKGSSSSLQDARGKFSGITREHIQTLSQATVLDEKS 23
++ V + N NS E K+ S SS+ D+ K G TR+++ + SQ + +EKS
Sbjct: 266 PSLSETV-KFGNLSNSANPETPEGKEESLSSMLDSLEKCLGSTRDYVLSSSQTSTSEEKS 324
Query: 22 GGSRKG 5
G SRKG
Sbjct: 325 GASRKG 330
>ref|XP_008360889.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X3
[Malus domestica]
Length = 755
Score = 56.6 bits (135), Expect = 6e-06
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Frame = -2
Query: 382 ACAVERDPSGSIGGICGPEVPGGNSESTFPESKPEVLDTSHSNSNKPHNPKQS------- 224
AC E DP ++G SE + S P++ ++S+ NP ++
Sbjct: 89 ACTSEGDPFSALG-----------SEESADSSSPQLSSEANSSETILPNPNEANSSKPLP 137
Query: 223 --IQNSQPENLIAGAVSRLPNSKNSRPSEMANPKKGSSSSLQDARGKFSGITREHIQTLS 50
Q++ PE L G+ NS +S E P+K S SS+ D+ K G T E++Q+ S
Sbjct: 138 AYAQSNPPETLKFGSFRIHSNSTHSHAPEEVTPEKDSLSSMLDSLEKCLGFTGENVQSKS 197
Query: 49 QATVLDEKSGGSRKG 5
Q + +EKSG G
Sbjct: 198 QTSTSEEKSGAGLTG 212
>ref|XP_008360888.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X2
[Malus domestica]
Length = 760
Score = 56.6 bits (135), Expect = 6e-06
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Frame = -2
Query: 382 ACAVERDPSGSIGGICGPEVPGGNSESTFPESKPEVLDTSHSNSNKPHNPKQS------- 224
AC E DP ++G SE + S P++ ++S+ NP ++
Sbjct: 94 ACTSEGDPFSALG-----------SEESADSSSPQLSSEANSSETILPNPNEANSSKPLP 142
Query: 223 --IQNSQPENLIAGAVSRLPNSKNSRPSEMANPKKGSSSSLQDARGKFSGITREHIQTLS 50
Q++ PE L G+ NS +S E P+K S SS+ D+ K G T E++Q+ S
Sbjct: 143 AYAQSNPPETLKFGSFRIHSNSTHSHAPEEVTPEKDSLSSMLDSLEKCLGFTGENVQSKS 202
Query: 49 QATVLDEKSGGSRKG 5
Q + +EKSG G
Sbjct: 203 QTSTSEEKSGAGLTG 217
>ref|XP_008360887.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X1
[Malus domestica]
Length = 868
Score = 56.6 bits (135), Expect = 6e-06
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Frame = -2
Query: 382 ACAVERDPSGSIGGICGPEVPGGNSESTFPESKPEVLDTSHSNSNKPHNPKQS------- 224
AC E DP ++G SE + S P++ ++S+ NP ++
Sbjct: 202 ACTSEGDPFSALG-----------SEESADSSSPQLSSEANSSETILPNPNEANSSKPLP 250
Query: 223 --IQNSQPENLIAGAVSRLPNSKNSRPSEMANPKKGSSSSLQDARGKFSGITREHIQTLS 50
Q++ PE L G+ NS +S E P+K S SS+ D+ K G T E++Q+ S
Sbjct: 251 AYAQSNPPETLKFGSFRIHSNSTHSHAPEEVTPEKDSLSSMLDSLEKCLGFTGENVQSKS 310
Query: 49 QATVLDEKSGGSRKG 5
Q + +EKSG G
Sbjct: 311 QTSTSEEKSGAGLTG 325