BLASTX nr result

ID: Forsythia23_contig00029943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00029943
         (353 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN20408.1| Putative U6 snRNA-associated Sm-like protein LSm4...   131   2e-28
emb|CDY18781.1| BnaAnng02460D [Brassica napus]                        129   6e-28
ref|XP_010088503.1| hypothetical protein L484_001116 [Morus nota...   129   7e-28
ref|XP_012083790.1| PREDICTED: sm-like protein LSM4 [Jatropha cu...   129   7e-28
ref|XP_012082737.1| PREDICTED: sm-like protein LSM4 [Jatropha cu...   129   7e-28
gb|KJB49937.1| hypothetical protein B456_008G146200 [Gossypium r...   129   7e-28
gb|KJB49936.1| hypothetical protein B456_008G146200 [Gossypium r...   129   7e-28
gb|KJB49935.1| hypothetical protein B456_008G146200 [Gossypium r...   129   7e-28
gb|KJB49934.1| hypothetical protein B456_008G146200 [Gossypium r...   129   7e-28
gb|KJB22526.1| hypothetical protein B456_004G052500 [Gossypium r...   129   7e-28
ref|XP_012473489.1| PREDICTED: sm-like protein LSM4 [Gossypium r...   129   7e-28
ref|XP_011087432.1| PREDICTED: probable U6 snRNA-associated Sm-l...   129   7e-28
ref|XP_011079681.1| PREDICTED: probable U6 snRNA-associated Sm-l...   129   7e-28
ref|XP_011008047.1| PREDICTED: probable U6 snRNA-associated Sm-l...   129   7e-28
ref|XP_010910837.1| PREDICTED: probable U6 snRNA-associated Sm-l...   129   7e-28
ref|XP_011033554.1| PREDICTED: probable U6 snRNA-associated Sm-l...   129   7e-28
ref|XP_011033553.1| PREDICTED: probable U6 snRNA-associated Sm-l...   129   7e-28
ref|XP_010938405.1| PREDICTED: probable U6 snRNA-associated Sm-l...   129   7e-28
gb|KHN46573.1| Putative U6 snRNA-associated Sm-like protein LSm4...   129   7e-28
ref|XP_010684532.1| PREDICTED: probable U6 snRNA-associated Sm-l...   129   7e-28

>gb|KHN20408.1| Putative U6 snRNA-associated Sm-like protein LSm4 [Glycine soja]
          Length = 405

 Score =  131 bits (329), Expect = 2e-28
 Identities = 66/87 (75%), Positives = 67/87 (77%), Gaps = 4/87 (4%)
 Frame = +2

Query: 104 TQQGDSDDLRA----KLQSAEDRLAEI*RNLVELKNGETYNGHLVNCDTWMNIHLREVIC 271
           T Q DSD L      KL+        I   LVELKNGETYNGHLVNCDTWMNIHLREVIC
Sbjct: 243 TVQSDSDLLWTISIKKLELQSPTTPPINDMLVELKNGETYNGHLVNCDTWMNIHLREVIC 302

Query: 272 TSKDGDRFWRMPECYIRGNTIKYLRVP 352
           TSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 303 TSKDGDRFWRMPECYIRGNTIKYLRVP 329


>emb|CDY18781.1| BnaAnng02460D [Brassica napus]
          Length = 494

 Score =  129 bits (325), Expect = 6e-28
 Identities = 57/58 (98%), Positives = 58/58 (100%)
 Frame = +2

Query: 179 NLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           +LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 347 SLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 404


>ref|XP_010088503.1| hypothetical protein L484_001116 [Morus notabilis]
           gi|587845880|gb|EXB36416.1| hypothetical protein
           L484_001116 [Morus notabilis]
          Length = 165

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 31  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 87


>ref|XP_012083790.1| PREDICTED: sm-like protein LSM4 [Jatropha curcas]
          Length = 100

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>ref|XP_012082737.1| PREDICTED: sm-like protein LSM4 [Jatropha curcas]
          Length = 148

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>gb|KJB49937.1| hypothetical protein B456_008G146200 [Gossypium raimondii]
          Length = 101

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>gb|KJB49936.1| hypothetical protein B456_008G146200 [Gossypium raimondii]
           gi|763782868|gb|KJB49939.1| hypothetical protein
           B456_008G146200 [Gossypium raimondii]
          Length = 90

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>gb|KJB49935.1| hypothetical protein B456_008G146200 [Gossypium raimondii]
          Length = 121

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>gb|KJB49934.1| hypothetical protein B456_008G146200 [Gossypium raimondii]
          Length = 172

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>gb|KJB22526.1| hypothetical protein B456_004G052500 [Gossypium raimondii]
          Length = 135

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>ref|XP_012473489.1| PREDICTED: sm-like protein LSM4 [Gossypium raimondii]
           gi|823147160|ref|XP_012473490.1| PREDICTED: sm-like
           protein LSM4 [Gossypium raimondii]
           gi|823147162|ref|XP_012473491.1| PREDICTED: sm-like
           protein LSM4 [Gossypium raimondii]
           gi|823147164|ref|XP_012473492.1| PREDICTED: sm-like
           protein LSM4 [Gossypium raimondii]
           gi|763755191|gb|KJB22522.1| hypothetical protein
           B456_004G052500 [Gossypium raimondii]
           gi|763755192|gb|KJB22523.1| hypothetical protein
           B456_004G052500 [Gossypium raimondii]
           gi|763755193|gb|KJB22524.1| hypothetical protein
           B456_004G052500 [Gossypium raimondii]
           gi|763755194|gb|KJB22525.1| hypothetical protein
           B456_004G052500 [Gossypium raimondii]
           gi|763755196|gb|KJB22527.1| hypothetical protein
           B456_004G052500 [Gossypium raimondii]
          Length = 149

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>ref|XP_011087432.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
           [Sesamum indicum]
          Length = 147

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>ref|XP_011079681.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
           [Sesamum indicum] gi|747066030|ref|XP_011079682.1|
           PREDICTED: probable U6 snRNA-associated Sm-like protein
           LSm4 [Sesamum indicum]
          Length = 144

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>ref|XP_011008047.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
           [Populus euphratica]
          Length = 150

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>ref|XP_010910837.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
           [Elaeis guineensis]
          Length = 147

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>ref|XP_011033554.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
           isoform X2 [Populus euphratica]
          Length = 151

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>ref|XP_011033553.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
           isoform X1 [Populus euphratica]
          Length = 151

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>ref|XP_010938405.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
           [Elaeis guineensis] gi|743844689|ref|XP_010938406.1|
           PREDICTED: probable U6 snRNA-associated Sm-like protein
           LSm4 [Elaeis guineensis]
          Length = 146

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


>gb|KHN46573.1| Putative U6 snRNA-associated Sm-like protein LSm4 [Glycine soja]
          Length = 135

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 2   LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 58


>ref|XP_010684532.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Beta
           vulgaris subsp. vulgaris] gi|870854195|gb|KMT06000.1|
           hypothetical protein BVRB_7g164860 [Beta vulgaris subsp.
           vulgaris]
          Length = 145

 Score =  129 bits (324), Expect = 7e-28
 Identities = 57/57 (100%), Positives = 57/57 (100%)
 Frame = +2

Query: 182 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 352
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72


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