BLASTX nr result

ID: Forsythia23_contig00029505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00029505
         (475 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP20466.1| unnamed protein product [Coffea canephora]             66   8e-09
ref|XP_012846375.1| PREDICTED: methionine--tRNA ligase, mitochon...    55   1e-07
ref|XP_003624617.1| hypothetical protein MTR_7g085480 [Medicago ...    55   2e-06
gb|ABN09802.1| hypothetical protein MtrDRAFT_AC167711g44v2 [Medi...    55   2e-06

>emb|CDP20466.1| unnamed protein product [Coffea canephora]
          Length = 63

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = -3

Query: 245 RAVNHALVRRAHIIHQA*FPVSLELKDTEVRAYRTDP 135
           RAVNHALV+R++ IHQ  FPVSLELKDTEVRAYRTDP
Sbjct: 22  RAVNHALVKRSYFIHQTWFPVSLELKDTEVRAYRTDP 58


>ref|XP_012846375.1| PREDICTED: methionine--tRNA ligase, mitochondrial, partial
           [Erythranthe guttatus]
          Length = 817

 Score = 55.5 bits (132), Expect(2) = 1e-07
 Identities = 25/40 (62%), Positives = 34/40 (85%)
 Frame = -3

Query: 254 QSHRAVNHALVRRAHIIHQA*FPVSLELKDTEVRAYRTDP 135
           +++ ++NHALV +  +IHQ+ F VSLE+KDTEVRAYRTDP
Sbjct: 205 RANESINHALVEQPWLIHQSWFLVSLEVKDTEVRAYRTDP 244



 Score = 26.6 bits (57), Expect(2) = 1e-07
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 331 VRQPPDHPSRVNPAENDPLL 272
           VRQ  DHPS+    +NDPLL
Sbjct: 181 VRQLLDHPSQPKLTKNDPLL 200


>ref|XP_003624617.1| hypothetical protein MTR_7g085480 [Medicago truncatula]
          Length = 81

 Score = 54.7 bits (130), Expect(2) = 2e-06
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 257 KQSHRAVNHALVRRAHIIHQA*FPVSLELKDTEVRAYRTDP 135
           +  HR VNHAL+ R+ I+ Q   PVSLE+KDT VR+YRTDP
Sbjct: 36  RSHHRTVNHALITRSQILIQIYVPVSLEIKDTVVRSYRTDP 76



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 328 RQPPDHPSRVNPAENDPL 275
           R P DHP++   AEND L
Sbjct: 10  RLPCDHPNQTGLAENDHL 27


>gb|ABN09802.1| hypothetical protein MtrDRAFT_AC167711g44v2 [Medicago truncatula]
          Length = 83

 Score = 54.7 bits (130), Expect(2) = 2e-06
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 257 KQSHRAVNHALVRRAHIIHQA*FPVSLELKDTEVRAYRTDP 135
           +  HR VNHAL+ R+ I+ Q   PVSLE+KDT VR+YRTDP
Sbjct: 38  RSHHRTVNHALITRSQILIQIYVPVSLEIKDTVVRSYRTDP 78



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 328 RQPPDHPSRVNPAENDPL 275
           R P DHP++   AEND L
Sbjct: 12  RLPCDHPNQTGLAENDHL 29


Top