BLASTX nr result
ID: Forsythia23_contig00027247
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00027247
(402 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 75 7e-27
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 75 7e-27
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 74 9e-27
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 73 1e-26
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 74 1e-26
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 74 3e-26
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 73 4e-26
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 73 8e-26
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 72 5e-25
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 70 6e-25
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 70 3e-23
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 71 2e-22
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 68 2e-22
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 68 4e-21
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 68 4e-21
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 68 4e-21
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 68 4e-21
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 69 1e-20
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 65 1e-20
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 65 2e-19
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 74.7 bits (182), Expect(2) = 7e-27
Identities = 33/44 (75%), Positives = 40/44 (90%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
G+DF DVFSP+ HSSIR LLGIVAMH++EL+Q+DVKT+FLHGE
Sbjct: 929 GIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGE 972
Score = 72.4 bits (176), Expect(2) = 7e-27
Identities = 40/88 (45%), Positives = 53/88 (60%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+V ++I+ + E TY AI D +RW AM +E+ESL KN T + ++L K+KK +R K
Sbjct: 839 LSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCK 898
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W EARYK RLVAKG SQ
Sbjct: 899 WIFKRKEGMSPSDEARYKARLVAKGYSQ 926
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 74.7 bits (182), Expect(2) = 7e-27
Identities = 33/44 (75%), Positives = 40/44 (90%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
G+DF DVFSP+ HSSIR LLGIVAMH++EL+Q+DVKT+FLHGE
Sbjct: 929 GIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGE 972
Score = 72.4 bits (176), Expect(2) = 7e-27
Identities = 40/88 (45%), Positives = 53/88 (60%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+V ++I+ + E TY AI D +RW AM +E+ESL KN T + ++L K+KK +R K
Sbjct: 839 LSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCK 898
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W EARYK RLVAKG SQ
Sbjct: 899 WIFKRKEGMSPSDEARYKARLVAKGYSQ 926
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 73.9 bits (180), Expect(2) = 9e-27
Identities = 40/88 (45%), Positives = 54/88 (61%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+V ++I+ + E TY AI D +RW AM +E+ESL KN T +L++L K+KK +R K
Sbjct: 1011 LSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCK 1070
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W EARYK RL+AKG SQ
Sbjct: 1071 WIFKRKEGISSSDEARYKARLIAKGYSQ 1098
Score = 72.8 bits (177), Expect(2) = 9e-27
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
G+DF DVFSPV HSSIR LL IVAMH++EL+Q+DVKT+FLHGE
Sbjct: 1101 GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGE 1144
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 73.2 bits (178), Expect(2) = 1e-26
Identities = 41/88 (46%), Positives = 53/88 (60%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+V + I+ + E TY AI D +RW AM +E+ESL KN T +L++L K+KK +R K
Sbjct: 776 LSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCK 835
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W EARYK RLVAKG SQ
Sbjct: 836 WIFKRKEGMSPSDEARYKARLVAKGYSQ 863
Score = 73.2 bits (178), Expect(2) = 1e-26
Identities = 33/44 (75%), Positives = 40/44 (90%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
G+DF DVFSPV HSSIR LLGIVAMH++EL+Q++VKT+FLHGE
Sbjct: 866 GIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGE 909
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 73.6 bits (179), Expect(2) = 1e-26
Identities = 41/88 (46%), Positives = 53/88 (60%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+V +DI+ + E TY AI D +RW AM +E+ESL KN T +L++L K+KK +R K
Sbjct: 586 LSVAEDIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCK 645
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W EA YK RLVAKG SQ
Sbjct: 646 WIFKRKKGISPSDEAMYKARLVAKGYSQ 673
Score = 72.8 bits (177), Expect(2) = 1e-26
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
G+DF DVFSPV HSSIR LL IVAMH++EL+Q+DVKT+FLHGE
Sbjct: 676 GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGE 719
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 74.3 bits (181), Expect(2) = 3e-26
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+V ++I+ + E TY AI D +RW AM +E+ESL KN T +L++L K+KK +R K
Sbjct: 683 LSVAEEIEGNAEPSTYSEAIVSDGCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCK 742
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W EARYK RLVAKG SQ
Sbjct: 743 WIFKRKKGMSPSDEARYKARLVAKGYSQ 770
Score = 70.9 bits (172), Expect(2) = 3e-26
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
G+DF DVFSPV HSSIR LL IVA+H++EL+Q+DVKT+FLHGE
Sbjct: 773 GIDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMDVKTAFLHGE 816
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 72.8 bits (177), Expect(2) = 4e-26
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
G+DF DVFSPV HSSIR LL IVAMH++EL+Q+DVKT+FLHGE
Sbjct: 280 GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGE 323
Score = 72.0 bits (175), Expect(2) = 4e-26
Identities = 40/88 (45%), Positives = 53/88 (60%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+V ++I+ + E TY AI D +RW AM +E+ESL KN T +L++L K+KK +R K
Sbjct: 190 LSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCK 249
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W EA YK RLVAKG SQ
Sbjct: 250 WIFKRKECISPSDEAMYKARLVAKGYSQ 277
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 72.8 bits (177), Expect(2) = 8e-26
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
G+DF DVFSPV HSSIR LL IVAMH++EL+Q+DVKT+FLHGE
Sbjct: 803 GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGE 846
Score = 70.9 bits (172), Expect(2) = 8e-26
Identities = 40/88 (45%), Positives = 53/88 (60%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+V ++I+ + E TY AI D +RW AM +E+ESL KN + +L +L K+KK +R K
Sbjct: 713 LSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKKPIRCK 772
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W EARYK RLVAKG SQ
Sbjct: 773 WIFKRKEGMSPSDEARYKARLVAKGYSQ 800
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 72.0 bits (175), Expect(2) = 5e-25
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
G+DF DVFSPV HSSIR LL IVAMH++EL Q+DVKT+FLHGE
Sbjct: 729 GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELDQMDVKTAFLHGE 772
Score = 68.9 bits (167), Expect(2) = 5e-25
Identities = 38/88 (43%), Positives = 52/88 (59%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+V ++I+ + E TY AI D +RW AM +E++SL KN T L++L K+KK++ K
Sbjct: 639 LSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMDSLEKNHTWKLVKLPKEKKLIHCK 698
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W EARYK LVAKG SQ
Sbjct: 699 WIFKRKEGMSPTDEARYKAMLVAKGYSQ 726
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 70.5 bits (171), Expect(2) = 6e-25
Identities = 39/88 (44%), Positives = 52/88 (59%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+V ++I+ + E Y AI D +RW M +E+ESL KN T +L++L K+KK +R K
Sbjct: 546 LSVAEEIEGNAEPSIYSEAIVSDDCNRWITTMHDEMESLEKNHTWELVKLPKEKKSIRCK 605
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W EARYK RLVAKG SQ
Sbjct: 606 WIFKRKEGMSPSDEARYKARLVAKGYSQ 633
Score = 70.1 bits (170), Expect(2) = 6e-25
Identities = 31/43 (72%), Positives = 38/43 (88%)
Frame = -1
Query: 129 VDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
+DF DVFSP+ HSSIR LL IVAMH++EL+Q+DVKT+FLHGE
Sbjct: 637 IDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGE 679
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 70.1 bits (170), Expect(2) = 3e-23
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = -1
Query: 138 VLGVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
++GVD+ DVFSPV HSSIR IVAMH+ EL+QLDVKT+FLHGE
Sbjct: 882 IVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGE 927
Score = 64.7 bits (156), Expect(2) = 3e-23
Identities = 35/86 (40%), Positives = 48/86 (55%)
Frame = -2
Query: 389 DDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYKWXXX 210
+ ++++ E TY A+ +W AMQEE++SL KNGT +L+ L K KK VR KW
Sbjct: 798 EQVENTLEPATYTEAVVSGDREKWISAMQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFK 857
Query: 209 XXXXXXXXXEARYKVRLVAKGNSQFL 132
R+K RLVAKG SQ +
Sbjct: 858 RKEGLSPSEPPRFKARLVAKGFSQIV 883
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 71.2 bits (173), Expect(2) = 2e-22
Identities = 39/88 (44%), Positives = 54/88 (61%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+V +DI+S E +Y A+S + ++W +AM EE+ESLHKN T +L+R+ + +KVV K
Sbjct: 893 LHVAEDIESPEP-MSYKEAVSSNESAKWLVAMSEEMESLHKNQTWELVRIPQGRKVVGCK 951
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W RYK RLVAKG SQ
Sbjct: 952 WVFKRKEGTSEGESVRYKARLVAKGFSQ 979
Score = 61.2 bits (147), Expect(2) = 2e-22
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
GVD+ ++FSPV H+SIR LL +VA + EL+QLDVKT+FLHGE
Sbjct: 982 GVDYNEIFSPVVRHTSIRVLLAMVAHFDLELEQLDVKTAFLHGE 1025
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 67.8 bits (164), Expect(2) = 2e-22
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -1
Query: 138 VLGVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
+ GVD+ DVFSPV HSSIR IV MH+ EL+QLDVKT+FLHGE
Sbjct: 882 IAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGE 927
Score = 64.3 bits (155), Expect(2) = 2e-22
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = -2
Query: 389 DDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYKWXXX 210
+ ++++ E TY A+ +W A+QEE++SL KNGT +L+ L K KK VR KW
Sbjct: 798 EQVENTLEPATYTEAVVSGDREKWISAIQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFK 857
Query: 209 XXXXXXXXXEARYKVRLVAKGNSQ 138
R+KVRLVAKG SQ
Sbjct: 858 RKEGLSPSEPPRFKVRLVAKGFSQ 881
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 67.8 bits (164), Expect(2) = 4e-21
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
GVD+ DVFSPV HSSIR L IVA H+ EL+QLDVKT+FLHGE
Sbjct: 895 GVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGE 938
Score = 60.1 bits (144), Expect(2) = 4e-21
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+ + +++ E TY A+ C W AM EE++SL KN T +++ L K KK + K
Sbjct: 805 LSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCK 864
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W +YK RLVA+G SQ
Sbjct: 865 WIFKRKEGLSSSEPPKYKARLVARGYSQ 892
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 67.8 bits (164), Expect(2) = 4e-21
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
GVD+ DVFSPV HSSIR L IVA H+ EL+QLDVKT+FLHGE
Sbjct: 897 GVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGE 940
Score = 60.1 bits (144), Expect(2) = 4e-21
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+ + +++ E TY A+ C W AM EE++SL KN T +++ L K KK + K
Sbjct: 807 LSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCK 866
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W +YK RLVA+G SQ
Sbjct: 867 WIFKRKEALSLSEPPKYKARLVARGYSQ 894
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 67.8 bits (164), Expect(2) = 4e-21
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
GVD+ DVFSPV HSSIR L IVA H+ EL+QLDVKT+FLHGE
Sbjct: 895 GVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGE 938
Score = 60.1 bits (144), Expect(2) = 4e-21
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+ + +++ E TY A+ C W AM EE++SL KN T +++ L K KK + K
Sbjct: 805 LSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCK 864
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W +YK RLVA+G SQ
Sbjct: 865 WIFKRKEGLSSSEPPKYKARLVARGYSQ 892
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 67.8 bits (164), Expect(2) = 4e-21
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
GVD+ DVFSPV HSSIR L IVA H+ EL+QLDVKT+FLHGE
Sbjct: 895 GVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGE 938
Score = 60.1 bits (144), Expect(2) = 4e-21
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L+ + +++ E TY A+ C W AM EE++SL KN T +++ L K KK + K
Sbjct: 805 LSCAEQVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCK 864
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W +YK RLVA+G SQ
Sbjct: 865 WIFKRKEGLSSSEPPKYKARLVARGYSQ 892
>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1131
Score = 69.3 bits (168), Expect(2) = 1e-20
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = -1
Query: 138 VLGVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
+ GVD+ DVFSPV HSSIR IVAMH+ EL+QLDVKT+FLHGE
Sbjct: 773 IAGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTTFLHGE 818
Score = 57.0 bits (136), Expect(2) = 1e-20
Identities = 32/84 (38%), Positives = 44/84 (52%)
Frame = -2
Query: 389 DDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYKWXXX 210
+ ++++ E TY A+ +W AMQ E++ L KNGT +L+ L K KK VR KW
Sbjct: 689 EQVENTLELATYTEAVVSGDREKWISAMQGEMQPLEKNGTWELVHLPKQKKPVRCKWIFK 748
Query: 209 XXXXXXXXXEARYKVRLVAKGNSQ 138
R+K LVAKG SQ
Sbjct: 749 RKEGLSPSEPPRFKATLVAKGFSQ 772
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 65.5 bits (158), Expect(2) = 1e-20
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -1
Query: 138 VLGVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
+ GVD+ DVFSPV HSSIR IVAM + EL+QLDVKT+FLHGE
Sbjct: 215 IAGVDYNDVFSPVVKHSSIRTFFSIVAMDDLELKQLDVKTTFLHGE 260
Score = 60.5 bits (145), Expect(2) = 1e-20
Identities = 34/84 (40%), Positives = 44/84 (52%)
Frame = -2
Query: 389 DDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYKWXXX 210
+ ++++ E TY A+ W AMQEE++SL KNGT L+ L K KK V KW
Sbjct: 131 EQVENTLEPATYTEAVVSGDRENWISAMQEEMQSLEKNGTWKLVHLPKQKKPVHCKWIFK 190
Query: 209 XXXXXXXXXEARYKVRLVAKGNSQ 138
R+K RLVAKG SQ
Sbjct: 191 RKEGLSPSEPPRFKARLVAKGFSQ 214
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 64.7 bits (156), Expect(2) = 2e-19
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = -1
Query: 132 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGE 1
GVD+ ++FSPV H+SIR LL IVA N EL+QLDVKT+FLHGE
Sbjct: 869 GVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGE 912
Score = 57.4 bits (137), Expect(2) = 2e-19
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = -2
Query: 401 LNVTDDIDSSEEHFTYLVAISCDVLSRWNIAMQEELESLHKNGT*DLLRLSKDKKVVRYK 222
L V +++D+SE TY AI +W AM +E+ESLHKN T DL+ +K++ K
Sbjct: 780 LQVAEEVDTSEPS-TYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCK 838
Query: 221 WXXXXXXXXXXXXEARYKVRLVAKGNSQ 138
W +YK R+VA+G +Q
Sbjct: 839 WVFKKKEGISPAEGVKYKARVVARGFNQ 866