BLASTX nr result

ID: Forsythia23_contig00026863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00026863
         (341 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012829347.1| PREDICTED: general transcription factor IIH ...    87   6e-15
ref|XP_011101336.1| PREDICTED: general transcription factor IIH ...    86   1e-14
ref|XP_009626298.1| PREDICTED: general transcription factor IIH ...    81   3e-13
ref|XP_009776618.1| PREDICTED: general transcription factor IIH ...    79   2e-12
ref|XP_006347459.1| PREDICTED: general transcription factor IIH ...    76   1e-11
ref|XP_004241513.1| PREDICTED: general transcription factor IIH ...    76   1e-11
emb|CDP12389.1| unnamed protein product [Coffea canephora]             75   1e-11
ref|XP_002284465.2| PREDICTED: general transcription factor IIH ...    72   1e-10
emb|CBI19033.3| unnamed protein product [Vitis vinifera]               72   1e-10
ref|XP_010999373.1| PREDICTED: uncharacterized protein LOC105107...    72   1e-10
ref|XP_010999372.1| PREDICTED: general transcription factor IIH ...    72   1e-10
ref|XP_010999370.1| PREDICTED: general transcription factor IIH ...    72   1e-10
ref|XP_010999369.1| PREDICTED: general transcription factor IIH ...    72   1e-10
ref|XP_010675067.1| PREDICTED: general transcription factor IIH ...    71   2e-10
ref|XP_008367337.1| PREDICTED: general transcription factor IIH ...    71   3e-10
ref|XP_008391898.1| PREDICTED: general transcription factor IIH ...    71   3e-10
ref|XP_004290858.1| PREDICTED: general transcription factor IIH ...    70   5e-10
ref|XP_004290857.1| PREDICTED: general transcription factor IIH ...    70   5e-10
ref|XP_010530197.1| PREDICTED: general transcription factor IIH ...    69   9e-10
ref|XP_002532948.1| RNA polymerase II transcription factor B sub...    69   1e-09

>ref|XP_012829347.1| PREDICTED: general transcription factor IIH subunit 3 [Erythranthe
           guttatus] gi|604297450|gb|EYU17663.1| hypothetical
           protein MIMGU_mgv1a011002mg [Erythranthe guttata]
          Length = 295

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 40/49 (81%), Positives = 46/49 (93%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           MTPV+SK+YTDDVSLL+VLIDTNPFFWNS+ S L FSKF+S+VLAFLNS
Sbjct: 1   MTPVSSKLYTDDVSLLVVLIDTNPFFWNSVKSNLPFSKFISHVLAFLNS 49


>ref|XP_011101336.1| PREDICTED: general transcription factor IIH subunit 3 [Sesamum
           indicum] gi|747106105|ref|XP_011101337.1| PREDICTED:
           general transcription factor IIH subunit 3 [Sesamum
           indicum]
          Length = 292

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           MTPV+ K+YTDDVSLLMVLIDTNPFFWNS+ S L FSKFLS+VLAFLN+
Sbjct: 1   MTPVSVKLYTDDVSLLMVLIDTNPFFWNSVKSALPFSKFLSHVLAFLNA 49


>ref|XP_009626298.1| PREDICTED: general transcription factor IIH subunit 3 [Nicotiana
           tomentosiformis]
          Length = 288

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 39/50 (78%), Positives = 47/50 (94%), Gaps = 1/50 (2%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSI-NSTLSFSKFLSNVLAFLNS 1
           MTPV+SK+YTDDVSLLMVLIDTNP+FW+S+ N+  +FSKFLS+VLAFLNS
Sbjct: 1   MTPVSSKLYTDDVSLLMVLIDTNPYFWSSMKNTAFTFSKFLSHVLAFLNS 50


>ref|XP_009776618.1| PREDICTED: general transcription factor IIH subunit 3 [Nicotiana
           sylvestris]
          Length = 291

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 38/50 (76%), Positives = 46/50 (92%), Gaps = 1/50 (2%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSI-NSTLSFSKFLSNVLAFLNS 1
           MTPV+SK+YTDDVSLLMVLIDTNP+ W+S+ N+  +FSKFLS+VLAFLNS
Sbjct: 1   MTPVSSKLYTDDVSLLMVLIDTNPYLWSSMKNTAFTFSKFLSHVLAFLNS 50


>ref|XP_006347459.1| PREDICTED: general transcription factor IIH subunit 3-like [Solanum
           tuberosum]
          Length = 290

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 35/50 (70%), Positives = 45/50 (90%), Gaps = 1/50 (2%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSI-NSTLSFSKFLSNVLAFLNS 1
           MTPV+SK+Y DDVSLLMVL+DTNP+FW+S+ N+  +F KF+S+VLAFLNS
Sbjct: 1   MTPVSSKLYADDVSLLMVLVDTNPYFWSSMKNTAFTFPKFISHVLAFLNS 50


>ref|XP_004241513.1| PREDICTED: general transcription factor IIH subunit 3 [Solanum
           lycopersicum]
          Length = 290

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 35/50 (70%), Positives = 45/50 (90%), Gaps = 1/50 (2%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSI-NSTLSFSKFLSNVLAFLNS 1
           MTPV+SK+Y DDVSLLMVL+DTNP+FW+S+ N+  +F KF+S+VLAFLNS
Sbjct: 1   MTPVSSKLYADDVSLLMVLVDTNPYFWSSMKNTAFTFPKFISHVLAFLNS 50


>emb|CDP12389.1| unnamed protein product [Coffea canephora]
          Length = 287

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 38/47 (80%), Positives = 40/47 (85%)
 Frame = -3

Query: 141 PVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           PV SKI TDDVSLLMVLIDTNP FW+SI    SFSKFLS+VLAFLNS
Sbjct: 4   PVPSKILTDDVSLLMVLIDTNPHFWSSIKPHFSFSKFLSHVLAFLNS 50


>ref|XP_002284465.2| PREDICTED: general transcription factor IIH subunit 3 [Vitis
           vinifera]
          Length = 303

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 35/49 (71%), Positives = 44/49 (89%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           M PV SK+Y+DDVSLL+VL+DTNPFFW++  ++L FSKFLS+VLAFLNS
Sbjct: 7   MAPVPSKLYSDDVSLLVVLLDTNPFFWST--ASLPFSKFLSHVLAFLNS 53


>emb|CBI19033.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 35/49 (71%), Positives = 44/49 (89%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           M PV SK+Y+DDVSLL+VL+DTNPFFW++  ++L FSKFLS+VLAFLNS
Sbjct: 1   MAPVPSKLYSDDVSLLVVLLDTNPFFWST--ASLPFSKFLSHVLAFLNS 47


>ref|XP_010999373.1| PREDICTED: uncharacterized protein LOC105107223 isoform X4 [Populus
           euphratica]
          Length = 273

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 35/49 (71%), Positives = 45/49 (91%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           MT V SK+Y+DDVSLL+VL+DTNPFFW + +S+LSFS+FLS+VLAF+NS
Sbjct: 1   MTSVPSKLYSDDVSLLVVLLDTNPFFWTA-SSSLSFSQFLSHVLAFVNS 48


>ref|XP_010999372.1| PREDICTED: general transcription factor IIH subunit 3 isoform X3
           [Populus euphratica]
          Length = 295

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 35/49 (71%), Positives = 45/49 (91%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           MT V SK+Y+DDVSLL+VL+DTNPFFW + +S+LSFS+FLS+VLAF+NS
Sbjct: 1   MTSVPSKLYSDDVSLLVVLLDTNPFFWTA-SSSLSFSQFLSHVLAFVNS 48


>ref|XP_010999370.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Populus euphratica] gi|743911031|ref|XP_010999371.1|
           PREDICTED: general transcription factor IIH subunit 3
           isoform X2 [Populus euphratica]
          Length = 298

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 35/49 (71%), Positives = 45/49 (91%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           MT V SK+Y+DDVSLL+VL+DTNPFFW + +S+LSFS+FLS+VLAF+NS
Sbjct: 1   MTSVPSKLYSDDVSLLVVLLDTNPFFWTA-SSSLSFSQFLSHVLAFVNS 48


>ref|XP_010999369.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Populus euphratica]
          Length = 411

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 35/49 (71%), Positives = 45/49 (91%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           MT V SK+Y+DDVSLL+VL+DTNPFFW + +S+LSFS+FLS+VLAF+NS
Sbjct: 1   MTSVPSKLYSDDVSLLVVLLDTNPFFWTA-SSSLSFSQFLSHVLAFVNS 48


>ref|XP_010675067.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Beta vulgaris subsp. vulgaris]
           gi|870868920|gb|KMT19706.1| hypothetical protein
           BVRB_1g007610 [Beta vulgaris subsp. vulgaris]
          Length = 306

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 34/51 (66%), Positives = 46/51 (90%), Gaps = 2/51 (3%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFW--NSINSTLSFSKFLSNVLAFLNS 1
           M PVASK+YTDDVSL+++L+DTNP+FW  +S +S+LSFS FLS+VL+F+NS
Sbjct: 1   MAPVASKLYTDDVSLVVLLLDTNPYFWTSSSPSSSLSFSHFLSHVLSFVNS 51


>ref|XP_008367337.1| PREDICTED: general transcription factor IIH subunit 3-like [Malus
           domestica]
          Length = 274

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 36/49 (73%), Positives = 40/49 (81%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           M   ASK+Y DDVSLLMVL+DTNPFFW+S  S L FSKFL +VLAFLNS
Sbjct: 1   MASAASKLYADDVSLLMVLLDTNPFFWSS--SNLPFSKFLPHVLAFLNS 47


>ref|XP_008391898.1| PREDICTED: general transcription factor IIH subunit 3 [Malus
           domestica] gi|657998960|ref|XP_008391899.1| PREDICTED:
           general transcription factor IIH subunit 3 [Malus
           domestica]
          Length = 297

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 36/49 (73%), Positives = 40/49 (81%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           M   ASK+Y DDVSLLMVL+DTNPFFW+S  S L FSKFL +VLAFLNS
Sbjct: 1   MASAASKLYADDVSLLMVLLDTNPFFWSS--SNLPFSKFLPHVLAFLNS 47


>ref|XP_004290858.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Fragaria vesca subsp. vesca]
          Length = 298

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 35/49 (71%), Positives = 41/49 (83%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           M  V SK+Y DDVSLLMVL+DTNPFFW+S  S+L FSK+LS+VL FLNS
Sbjct: 1   MASVPSKLYADDVSLLMVLLDTNPFFWSS--SSLPFSKYLSHVLTFLNS 47


>ref|XP_004290857.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Fragaria vesca subsp. vesca]
          Length = 300

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 35/49 (71%), Positives = 41/49 (83%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           M  V SK+Y DDVSLLMVL+DTNPFFW+S  S+L FSK+LS+VL FLNS
Sbjct: 1   MASVPSKLYADDVSLLMVLLDTNPFFWSS--SSLPFSKYLSHVLTFLNS 47


>ref|XP_010530197.1| PREDICTED: general transcription factor IIH subunit 3 [Tarenaya
           hassleriana]
          Length = 298

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 33/49 (67%), Positives = 45/49 (91%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           M  VA+K+Y+DDVSLL+VL+DTNPFFW++  S+L+FS+FLS+VLAFLN+
Sbjct: 1   MASVAAKLYSDDVSLLVVLLDTNPFFWST--SSLAFSQFLSHVLAFLNA 47


>ref|XP_002532948.1| RNA polymerase II transcription factor B subunit, putative [Ricinus
           communis] gi|223527277|gb|EEF29432.1| RNA polymerase II
           transcription factor B subunit, putative [Ricinus
           communis]
          Length = 266

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 34/49 (69%), Positives = 42/49 (85%)
 Frame = -3

Query: 147 MTPVASKIYTDDVSLLMVLIDTNPFFWNSINSTLSFSKFLSNVLAFLNS 1
           M  V SK+Y+DDVSL+MVL+DTNPFFW +  S+L FS+FLS+VLAFLNS
Sbjct: 1   MASVPSKLYSDDVSLVMVLLDTNPFFWTT--SSLPFSQFLSHVLAFLNS 47


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