BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00026464
         (922 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011076392.1| PREDICTED: DNA-directed RNA polymerase III s...   247   7e-63
emb|CDP05351.1| unnamed protein product [Coffea canephora]            233   1e-58
ref|XP_009784283.1| PREDICTED: DNA-directed RNA polymerase III s...   213   2e-52
ref|XP_009784284.1| PREDICTED: DNA-directed RNA polymerase III s...   212   3e-52
ref|XP_010321476.1| PREDICTED: DNA-directed RNA polymerase III s...   206   2e-50
ref|XP_009607009.1| PREDICTED: DNA-directed RNA polymerase III s...   205   3e-50
ref|XP_006355616.1| PREDICTED: DNA-directed RNA polymerase III s...   205   3e-50
ref|XP_009607010.1| PREDICTED: DNA-directed RNA polymerase III s...   204   5e-50
ref|XP_012852318.1| PREDICTED: uncharacterized protein LOC105971...   198   4e-48
ref|XP_012466685.1| PREDICTED: DNA-directed RNA polymerase III s...   189   3e-45
ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260...   189   3e-45
emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]   187   9e-45
gb|KHG22798.1| DNA-directed RNA polymerase III subunit RPC4 [Gos...   187   1e-44
ref|XP_012466695.1| PREDICTED: DNA-directed RNA polymerase III s...   184   1e-43
ref|XP_002510979.1| DNA binding protein, putative [Ricinus commu...   184   1e-43
ref|XP_007038340.1| DNA binding protein, putative isoform 2 [The...   184   1e-43
ref|XP_012090466.1| PREDICTED: DNA-directed RNA polymerase III s...   177   7e-42
gb|KDP22444.1| hypothetical protein JCGZ_26275 [Jatropha curcas]      176   2e-41
ref|XP_010035038.1| PREDICTED: DNA-directed RNA polymerase III s...   171   8e-40
ref|XP_007038339.1| DNA binding protein, putative isoform 1 [The...   167   7e-39

>ref|XP_011076392.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like
           [Sesamum indicum] gi|747059973|ref|XP_011076393.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           rpc4-like [Sesamum indicum]
           gi|747059975|ref|XP_011076394.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc4-like [Sesamum indicum]
          Length = 366

 Score =  247 bits (631), Expect = 7e-63
 Identities = 140/271 (51%), Positives = 172/271 (63%), Gaps = 8/271 (2%)
 Frame = -3

Query: 797 MDPDPPSSNPRKVKFAPKGPPRRSTRQI--KPKIXXXXXXXXXXXDKALLRRANEHLTRR 624
           MDPDPPSS PRKVKFAPKGPPRR+ + +  K +             + L R+ +EHLTRR
Sbjct: 1   MDPDPPSSTPRKVKFAPKGPPRRAPQPLTAKSETAAQDDSDDEQTQQFLTRKVHEHLTRR 60

Query: 623 RPKAEKKSSVQVAFSHGVGSNSVRSFGKQRERKDDQCDATGLRDLASDGIENPVNLPST- 447
             K EKKSS QVAFSHGV +N++R+FGK RER  D+ DA    + A    +N V   ST 
Sbjct: 61  GSKVEKKSSAQVAFSHGVAANTIRTFGKPRERTGDRADAADSNEPAISDDQNLVASVSTA 120

Query: 446 -DTGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDEAEFGKA 270
              GV E    S  AL+ KKK EYKE WDY+ SYYP TLP R+PYSGDPE LD+ EF +A
Sbjct: 121 GTEGVDENTASSADALVVKKKREYKEPWDYKHSYYPTTLPWRRPYSGDPEKLDKEEFEEA 180

Query: 269 AAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADHLKS--- 99
           +   EYDEN  +SASDLGLL +DD  +MLFFQ PPNLPL ++    ++RDTA+ LK+   
Sbjct: 181 S---EYDENNLSSASDLGLLGQDDTQRMLFFQFPPNLPLGRRQTGTNKRDTANDLKALEC 237

Query: 98  -SMISETHQKVTAGNVPGVSGNSTDMKGKEI 9
               + +  K   G  P VSG S   KGK+I
Sbjct: 238 GVFSAASKGKEIVGCGPRVSGISMGTKGKDI 268


>emb|CDP05351.1| unnamed protein product [Coffea canephora]
          Length = 380

 Score =  233 bits (594), Expect = 1e-58
 Identities = 134/272 (49%), Positives = 174/272 (63%), Gaps = 7/272 (2%)
 Frame = -3

Query: 797 MDPDPPSSNPRKVKFAPKGPP-RRSTRQIKPKIXXXXXXXXXXXDK---ALLRRANEHLT 630
           M+P+   S PR+VKFAPKGPP RR +  ++PK            D+   +LLR+ NEHLT
Sbjct: 1   MEPNLSPSTPRRVKFAPKGPPPRRKSTPLQPKTEVAGGGDHGGDDEINESLLRKVNEHLT 60

Query: 629 RRRPKAEKKSSVQVAFSHGVGSN-SVRSFGKQRERKDDQCDATGLRDLASDGIENPVNLP 453
           RR P+AEKKSSVQVAFSHGV S+ S+R++G  +E   D+ + TGLRD A+D   +  +LP
Sbjct: 61  RRWPQAEKKSSVQVAFSHGVASSTSLRTYGSAKEGSGDRSNGTGLRDSAADTRGDIHSLP 120

Query: 452 STDT--GVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDEAEF 279
           ST     + E+  D+T     +KK EYKE WDY  SYYPV LP+R+PYSGDPE+LD  EF
Sbjct: 121 STSKIDWMVESSEDATVTSFKQKKREYKEPWDYNHSYYPVALPIRRPYSGDPEVLDREEF 180

Query: 278 GKAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADHLKS 99
           G+A A  EYDE+A +SASDLGLLE+ D  +MLF Q P NLP  K+ +      T++H  +
Sbjct: 181 GEAKAASEYDESAIHSASDLGLLEEVDGEKMLFLQFPANLPFVKRESGPGSTGTSEHASA 240

Query: 98  SMISETHQKVTAGNVPGVSGNSTDMKGKEILG 3
           S+    H+     + PG S   T  KGKEI G
Sbjct: 241 SV---NHKHRAGSSRPGGSVAPTTAKGKEIPG 269


>ref|XP_009784283.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
           isoform X1 [Nicotiana sylvestris]
          Length = 356

 Score =  213 bits (541), Expect = 2e-52
 Identities = 134/274 (48%), Positives = 173/274 (63%), Gaps = 10/274 (3%)
 Frame = -3

Query: 797 MDPDPPSSNP--RKVKFAPKGPPRRSTR---QIKPKIXXXXXXXXXXXDKALLRRANEHL 633
           MDPD PSS P  RKVKFAPK PPRR  +   Q K +             +A+L R NE L
Sbjct: 1   MDPDLPSSPPKTRKVKFAPKAPPRRKKQNSVQHKTEADRNEDTNDNEAAEAILHRVNERL 60

Query: 632 TRRRPKAEKKSSVQVAFSHGVGS-NSVRSFGKQRERKDDQCDATGLRDLASDG---IENP 465
           TR++PK EKK+ V+VAF+HGV S  S+R+FGK +E   ++   + ++D  SD    I++ 
Sbjct: 61  TRQKPKTEKKA-VEVAFAHGVASPTSIRTFGKPKELAINR--GSTVKDPESDDRMDIDSS 117

Query: 464 VNLPST-DTGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDE 288
             LPS+ +  + E    ++ ALL +KK EYKE WDY  + YP+TLPLR+PY+GDPE+LDE
Sbjct: 118 PPLPSSIEADLAEISVSNSDALLKRKKKEYKEPWDYHHTNYPITLPLRRPYAGDPEILDE 177

Query: 287 AEFGKAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADH 108
           AEFGKAAA  EYDEN  + AS+LGLLEK D  Q+LF QLP NLPL    A+   RDTA  
Sbjct: 178 AEFGKAAANAEYDENNIHPASELGLLEKKDDVQILFLQLPVNLPL----ATKGGRDTAGC 233

Query: 107 LKSSMISETHQKVTAGNVPGVSGNSTDMKGKEIL 6
           L S M+     K  AG  P +  ++   KGKEI+
Sbjct: 234 LPSPMLK---GKEAAGTAPRLLASA---KGKEIV 261


>ref|XP_009784284.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
           isoform X2 [Nicotiana sylvestris]
          Length = 355

 Score =  212 bits (539), Expect = 3e-52
 Identities = 134/274 (48%), Positives = 172/274 (62%), Gaps = 10/274 (3%)
 Frame = -3

Query: 797 MDPDPPSSNP--RKVKFAPKGPPRRSTR---QIKPKIXXXXXXXXXXXDKALLRRANEHL 633
           MDPD PSS P  RKVKFAPK PPRR  +   Q K +             +A+L R NE L
Sbjct: 1   MDPDLPSSPPKTRKVKFAPKAPPRRKKQNSVQHKTEADRNEDTNDNEAAEAILHRVNERL 60

Query: 632 TRRRPKAEKKSSVQVAFSHGVGS-NSVRSFGKQRERKDDQCDATGLRDLASDG---IENP 465
           TR++PK EKK  V+VAF+HGV S  S+R+FGK +E   ++   + ++D  SD    I++ 
Sbjct: 61  TRQKPKTEKK--VEVAFAHGVASPTSIRTFGKPKELAINR--GSTVKDPESDDRMDIDSS 116

Query: 464 VNLPST-DTGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDE 288
             LPS+ +  + E    ++ ALL +KK EYKE WDY  + YP+TLPLR+PY+GDPE+LDE
Sbjct: 117 PPLPSSIEADLAEISVSNSDALLKRKKKEYKEPWDYHHTNYPITLPLRRPYAGDPEILDE 176

Query: 287 AEFGKAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADH 108
           AEFGKAAA  EYDEN  + AS+LGLLEK D  Q+LF QLP NLPL    A+   RDTA  
Sbjct: 177 AEFGKAAANAEYDENNIHPASELGLLEKKDDVQILFLQLPVNLPL----ATKGGRDTAGC 232

Query: 107 LKSSMISETHQKVTAGNVPGVSGNSTDMKGKEIL 6
           L S M+     K  AG  P +  ++   KGKEI+
Sbjct: 233 LPSPMLK---GKEAAGTAPRLLASA---KGKEIV 260


>ref|XP_010321476.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Solanum
           lycopersicum]
          Length = 371

 Score =  206 bits (523), Expect = 2e-50
 Identities = 137/282 (48%), Positives = 174/282 (61%), Gaps = 19/282 (6%)
 Frame = -3

Query: 797 MDPDPP--SSNPRKVKFAPKGPPRRSTR---QIKPKIXXXXXXXXXXXDKALLRRANEHL 633
           MDPD P  SS+ RKVKFAPKGPPRR  +   Q K +             +A+LR+ NE L
Sbjct: 1   MDPDLPLSSSSTRKVKFAPKGPPRRKKQNPAQPKNEADGNEDRDDNEAAEAVLRKVNERL 60

Query: 632 TRRRPKAEKKSSVQVAFSHGVGS-NSVRSFGKQRERKDDQCDATGLRDLASDG--IENPV 462
           TR++PK EKK  V+VAF+HGV S  S ++ GK RE   +Q D+T   + + D   I++  
Sbjct: 61  TRQKPKTEKK--VEVAFAHGVASPTSTKTSGKSRELTVNQ-DSTLKDNESCDNMDIDSLP 117

Query: 461 NLPS-TDTGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDEA 285
            LPS T   + E   +++ +LL +KK EYKE WDY  S YPVTLPLR+PY+GDPE+L+EA
Sbjct: 118 TLPSSTGPDLAEMSVNNSDSLLKRKK-EYKEPWDYHHSNYPVTLPLRRPYAGDPEILNEA 176

Query: 284 EFGKAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADHL 105
           EFG+AA   EYDEN  N AS+LGLLEK D  Q+LF QLP NLPLSK  AS   RDTA  L
Sbjct: 177 EFGEAAKNAEYDENNINPASELGLLEKKDDVQLLFLQLPANLPLSKLQASTGGRDTAVSL 236

Query: 104 --------KSSMISE--THQKVTAGNVPGVSGNSTDMKGKEI 9
                   K++ +S      K  AG+ P    ++   KGKEI
Sbjct: 237 TLPGDKSDKAATLSSPMLKGKEVAGSAPRFLASA---KGKEI 275


>ref|XP_009607009.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
           isoform X1 [Nicotiana tomentosiformis]
          Length = 358

 Score =  205 bits (522), Expect = 3e-50
 Identities = 131/274 (47%), Positives = 168/274 (61%), Gaps = 10/274 (3%)
 Frame = -3

Query: 797 MDPDPPSSNP--RKVKFAPKGPPRRSTR---QIKPKIXXXXXXXXXXXDKALLRRANEHL 633
           MDPD PSS P  RKVKFAPK PPRR  +   Q K +             +A+ RR NE L
Sbjct: 1   MDPDLPSSPPKTRKVKFAPKAPPRRKKQNPVQPKTEADGNEDTNDNEAAEAIRRRVNERL 60

Query: 632 TRRRPKAEKKSSVQVAFSHGVGS-NSVRSFGKQRERKDDQCDATGLRDLASDG---IENP 465
           TR++PK EKK+ V+VAFSHGV S  S+R+FGK +E   +    + ++D  SD    I++ 
Sbjct: 61  TRQKPKTEKKA-VEVAFSHGVASPTSIRTFGKPKELTVNW--GSTVKDPESDDRMDIDSS 117

Query: 464 VNLPST-DTGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDE 288
             LPS+    + E    ++ AL  +KK EYKE WDY  + YP+TLPLR+PY+G+PE+LDE
Sbjct: 118 PPLPSSIGADLAEISVSNSDALFKRKKKEYKEPWDYHHTNYPITLPLRRPYAGNPEILDE 177

Query: 287 AEFGKAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADH 108
           AEFGKAA   EYDEN  + AS+LGLLEK D  Q+LF QLP NLPL    A+   RDTA  
Sbjct: 178 AEFGKAAVNAEYDENNIHPASELGLLEKKDDVQILFLQLPANLPL----ATKGGRDTAGC 233

Query: 107 LKSSMISETHQKVTAGNVPGVSGNSTDMKGKEIL 6
           L S M+     K   G  P +  ++   KGKEI+
Sbjct: 234 LSSPMLK---GKEATGTAPRLLASA---KGKEIV 261


>ref|XP_006355616.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
           [Solanum tuberosum]
          Length = 368

 Score =  205 bits (522), Expect = 3e-50
 Identities = 134/278 (48%), Positives = 170/278 (61%), Gaps = 15/278 (5%)
 Frame = -3

Query: 797 MDPDPP--SSNPRKVKFAPKGPPRRSTR---QIKPKIXXXXXXXXXXXDKALLRRANEHL 633
           MDPD P  SS+ RKVKFAPKGPPRR  +   Q K +             +A+LR+ NE L
Sbjct: 1   MDPDLPLSSSSTRKVKFAPKGPPRRKKQNPAQPKNEADGNEDRDDNEAAEAILRKVNERL 60

Query: 632 TRRRPKAEKKSSVQVAFSHGVGS-NSVRSFGKQRERKDDQCDATGLRDLASDG--IENPV 462
           TR++PK EKK  V+VAF+HGV S  S ++FGK RE   +Q D+T   + + D   I++  
Sbjct: 61  TRQKPKTEKK--VEVAFTHGVASPTSTKTFGKSRELTVNQ-DSTLKDNESCDNMDIDSLP 117

Query: 461 NLPS-TDTGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDEA 285
            LPS T   + E   +++ +LL +KK EYKE WDY  S YPVTLPLR+PY+GDPE+L+EA
Sbjct: 118 TLPSSTGPDLAEMSVNNSDSLLKRKK-EYKEPWDYHHSNYPVTLPLRRPYAGDPEILNEA 176

Query: 284 EFGKAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADHL 105
           EFG+AA    YDEN  N AS+LGLLEK D  Q+LF QLP NLPLSK  AS   RDTA  L
Sbjct: 177 EFGEAAKNAVYDENNINPASELGLLEKKDDVQLLFLQLPANLPLSKLQASTGGRDTAVCL 236

Query: 104 KSSMISETHQKVTAGNVPGVSGNS------TDMKGKEI 9
             ++  +   K    + P + G           KGKEI
Sbjct: 237 --TLPGDKSDKAATLSSPMLKGKEVAGSALAGAKGKEI 272


>ref|XP_009607010.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
           isoform X2 [Nicotiana tomentosiformis]
          Length = 357

 Score =  204 bits (520), Expect = 5e-50
 Identities = 131/274 (47%), Positives = 167/274 (60%), Gaps = 10/274 (3%)
 Frame = -3

Query: 797 MDPDPPSSNP--RKVKFAPKGPPRRSTR---QIKPKIXXXXXXXXXXXDKALLRRANEHL 633
           MDPD PSS P  RKVKFAPK PPRR  +   Q K +             +A+ RR NE L
Sbjct: 1   MDPDLPSSPPKTRKVKFAPKAPPRRKKQNPVQPKTEADGNEDTNDNEAAEAIRRRVNERL 60

Query: 632 TRRRPKAEKKSSVQVAFSHGVGS-NSVRSFGKQRERKDDQCDATGLRDLASDG---IENP 465
           TR++PK EKK  V+VAFSHGV S  S+R+FGK +E   +    + ++D  SD    I++ 
Sbjct: 61  TRQKPKTEKK--VEVAFSHGVASPTSIRTFGKPKELTVNW--GSTVKDPESDDRMDIDSS 116

Query: 464 VNLPST-DTGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDE 288
             LPS+    + E    ++ AL  +KK EYKE WDY  + YP+TLPLR+PY+G+PE+LDE
Sbjct: 117 PPLPSSIGADLAEISVSNSDALFKRKKKEYKEPWDYHHTNYPITLPLRRPYAGNPEILDE 176

Query: 287 AEFGKAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADH 108
           AEFGKAA   EYDEN  + AS+LGLLEK D  Q+LF QLP NLPL    A+   RDTA  
Sbjct: 177 AEFGKAAVNAEYDENNIHPASELGLLEKKDDVQILFLQLPANLPL----ATKGGRDTAGC 232

Query: 107 LKSSMISETHQKVTAGNVPGVSGNSTDMKGKEIL 6
           L S M+     K   G  P +  ++   KGKEI+
Sbjct: 233 LSSPMLK---GKEATGTAPRLLASA---KGKEIV 260


>ref|XP_012852318.1| PREDICTED: uncharacterized protein LOC105971930 [Erythranthe
           guttatus] gi|604305879|gb|EYU24936.1| hypothetical
           protein MIMGU_mgv1a009918mg [Erythranthe guttata]
          Length = 327

 Score =  198 bits (504), Expect = 4e-48
 Identities = 118/253 (46%), Positives = 156/253 (61%), Gaps = 5/253 (1%)
 Frame = -3

Query: 797 MDPDPPSSNPRKVKFAPKGPPRRSTRQIKPKIXXXXXXXXXXXDKA---LLRRANEHLTR 627
           MDPDPP + PRKV+FAPK P RR+ +    KI            +A   L R+  EHL R
Sbjct: 1   MDPDPPKAAPRKVRFAPKEPRRRTPKPSSFKIEPAPEVDDTDDLEAQEFLTRKVKEHLAR 60

Query: 626 R-RPKAEKKSSVQVAFSHGVGSNSVRSFGKQRERKDDQCDATGLRDLASDGIENPVNLPS 450
           R RPK+E K  VQVAFS+ VGS+S+R+FG+Q+E  D   DA   ++L  +G++N V   S
Sbjct: 61  RGRPKSENKGRVQVAFSNDVGSSSIRTFGRQKESSDVGHDAVDSKELTPNGVQNLVTSMS 120

Query: 449 TDTGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDEAEFGKA 270
             TG+    T     +  KKK EYKE WDY  SYYP TLPLR+PYSG+PELLD +EF  A
Sbjct: 121 I-TGLTNGVT-----VTKKKKREYKEPWDYENSYYPTTLPLRRPYSGNPELLDNSEFEDA 174

Query: 269 AAKLEYDENATNSASDLGLLEKD-DKPQMLFFQLPPNLPLSKQPASVSRRDTADHLKSSM 93
              +EYDE++ +SAS LGLL++D + P+MLFFQ P NLP  K+ AS          K   
Sbjct: 175 ---VEYDEDSLSSASGLGLLDEDANTPKMLFFQFPSNLPTGKRAAS----------KGKE 221

Query: 92  ISETHQKVTAGNV 54
           I+ T+ ++ A ++
Sbjct: 222 IAGTNSRILATSI 234


>ref|XP_012466685.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 isoform X1
           [Gossypium raimondii] gi|763740373|gb|KJB07872.1|
           hypothetical protein B456_001G049700 [Gossypium
           raimondii]
          Length = 302

 Score =  189 bits (479), Expect = 3e-45
 Identities = 118/241 (48%), Positives = 145/241 (60%), Gaps = 7/241 (2%)
 Frame = -3

Query: 797 MDPDPPSSNPRKVKFAPKGPPRRSTRQIKPKIXXXXXXXXXXXDKA-----LLRRANEHL 633
           MD D PSS  RKV+FAPK P  +S+R  KPK+           ++A     LL R NE+L
Sbjct: 1   MDVDGPSSGRRKVRFAPKAP--QSSR--KPKLAVAKSETSDEDEEAAQAQYLLGRFNENL 56

Query: 632 TRRRPKAEKKSSVQVAFSHGV-GSNSVRSFGKQRE-RKDDQCDATGLRDLASDGIENPVN 459
           TR++PK EKKSSVQ+AF  G   S S+RS+G +R  R  D   +T   D           
Sbjct: 57  TRQKPKVEKKSSVQIAFGPGAPSSTSLRSYGNKRAGRILDDSSSTSKEDC---------- 106

Query: 458 LPSTDTGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDEAEF 279
                T +C +  D+  A   + K EY+E WDY R+YYP TLPLR+PYSGDPELLDEAEF
Sbjct: 107 -----TDICSS--DAIEAPAPRVKSEYREPWDYNRTYYPTTLPLRRPYSGDPELLDEAEF 159

Query: 278 GKAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADHLKS 99
            + A K EYDE   N ASDLGLLE+ DK +MLFFQ P NLP  KQP S   ++ A+H  S
Sbjct: 160 VETAKK-EYDETTINPASDLGLLEEGDKQKMLFFQFPGNLPRIKQPVSKKGKEKAEHSVS 218

Query: 98  S 96
           S
Sbjct: 219 S 219


>ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260717 [Vitis vinifera]
           gi|297745083|emb|CBI38675.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score =  189 bits (479), Expect = 3e-45
 Identities = 112/239 (46%), Positives = 142/239 (59%), Gaps = 6/239 (2%)
 Frame = -3

Query: 797 MDPDPPSS-NPRKVKFAPKGPPRRSTRQIKPKIXXXXXXXXXXXDKALLRRANEHLTRRR 621
           MD +  SS +PRKV+FAPK PPRR  +   P+             + LLRR NE L R+ 
Sbjct: 1   MDHNESSSVSPRKVRFAPKSPPRRKPKTTAPQPVVAEEEDEAKRAQYLLRRVNEKLRRQG 60

Query: 620 PKAEKKSSVQVAFSHGVG--SNSVRSFGKQRERKDDQCDATGLRDLASDGIENPVNLPST 447
           PK EK SSVQV F  G    S+++R+FG  R+   D+     L+    D  E  V+ PST
Sbjct: 61  PKVEKTSSVQVVFGPGAATPSDTIRTFGVHRDGNSDKSSGMELKVSTPDHEEIAVSSPST 120

Query: 446 DTGVCET---FTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDEAEFG 276
            T   ET   F D+T      +K  YKE WDY  SYYP TLPLR+P+SGDPE+LDEAEFG
Sbjct: 121 -TKPDETNGYFADATDDSAQIRK-RYKEPWDYVHSYYPTTLPLRKPHSGDPEILDEAEFG 178

Query: 275 KAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADHLKS 99
           +A+  LEYDE   N AS+LGLLE+ +K +M  FQLP NLPL KQ  S   ++  ++  S
Sbjct: 179 EASTNLEYDEKTINPASELGLLEESEKGRMFLFQLPANLPLFKQSPSAKGKEIVENSTS 237


>emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]
          Length = 348

 Score =  187 bits (475), Expect = 9e-45
 Identities = 117/269 (43%), Positives = 148/269 (55%), Gaps = 6/269 (2%)
 Frame = -3

Query: 797 MDPDPPSS-NPRKVKFAPKGPPRRSTRQIKPKIXXXXXXXXXXXDKALLRRANEHLTRRR 621
           MD +  SS +PRKV+FAPK PPRR  +   P+             + LLRR NE L R+ 
Sbjct: 1   MDHNESSSVSPRKVRFAPKSPPRRKPKTTAPQPVVAEEEDEAKRAQYLLRRVNEKLRRQG 60

Query: 620 PKAEKKSSVQVAFSHGVG--SNSVRSFGKQRERKDDQCDATGLRDLASDGIENPVNLPST 447
           PK EK SSVQV F  G    S+++R+FG  R+   D+     L+    D  E  V+  ST
Sbjct: 61  PKVEKTSSVQVVFGPGAATPSDTIRTFGVHRDGNSDKSSGMELKVSTPDHEEIAVSSXST 120

Query: 446 DTGVCET---FTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDEAEFG 276
            T   ET   F D+T      +K  YKE WDY  SYYP TLPLR+P+SGDPE+LDEAEFG
Sbjct: 121 -TKPDETNGXFADATDDSAQIRK-RYKEPWDYVHSYYPTTLPLRKPHSGDPEILDEAEFG 178

Query: 275 KAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADHLKSS 96
           +A+  LEYDE   N AS+LGLLE+ +K +M  FQLP NLPL KQ AS   ++        
Sbjct: 179 EASTNLEYDEKTINPASELGLLEESEKGRMFLFQLPANLPLVKQSASAKGKE-------- 230

Query: 95  MISETHQKVTAGNVPGVSGNSTDMKGKEI 9
                      GN   + G     KGK++
Sbjct: 231 ---------IVGNSTSLEGIYASAKGKQV 250


>gb|KHG22798.1| DNA-directed RNA polymerase III subunit RPC4 [Gossypium arboreum]
          Length = 302

 Score =  187 bits (474), Expect = 1e-44
 Identities = 117/241 (48%), Positives = 145/241 (60%), Gaps = 7/241 (2%)
 Frame = -3

Query: 797 MDPDPPSSNPRKVKFAPKGPPRRSTRQIKPKIXXXXXXXXXXXDKA-----LLRRANEHL 633
           MD D PSS  RKV+FAPK P  +S+R  KPK+           ++A     LL R NE+L
Sbjct: 1   MDVDGPSSGRRKVRFAPKAP--QSSR--KPKLAVAKSETSDEDEEAAQAQYLLGRFNENL 56

Query: 632 TRRRPKAEKKSSVQVAFSHGV-GSNSVRSFGKQRE-RKDDQCDATGLRDLASDGIENPVN 459
           TR++PK EKKSSVQ+AF  G   S S+RS+G +R  R  D   +T   D           
Sbjct: 57  TRQKPKVEKKSSVQIAFGPGAPSSTSLRSYGNKRAGRILDDSSSTSKEDC---------- 106

Query: 458 LPSTDTGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDEAEF 279
                T +C +  D+  A   + K EY+E WDY R+YYP TLPLR+PYSGDPELLDEAEF
Sbjct: 107 -----TDICSS--DAIEAPAPRVKSEYREPWDYNRTYYPTTLPLRRPYSGDPELLDEAEF 159

Query: 278 GKAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADHLKS 99
            + A K EYDE   N ASDLGLL++ DK +MLFFQ P NLP  KQP S   ++ A+H  S
Sbjct: 160 VETAKK-EYDEATINPASDLGLLQEGDKQKMLFFQFPGNLPRIKQPVSKKGKEKAEHSVS 218

Query: 98  S 96
           S
Sbjct: 219 S 219


>ref|XP_012466695.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 isoform X2
           [Gossypium raimondii] gi|763740374|gb|KJB07873.1|
           hypothetical protein B456_001G049700 [Gossypium
           raimondii]
          Length = 301

 Score =  184 bits (466), Expect = 1e-43
 Identities = 118/241 (48%), Positives = 144/241 (59%), Gaps = 7/241 (2%)
 Frame = -3

Query: 797 MDPDPPSSNPRKVKFAPKGPPRRSTRQIKPKIXXXXXXXXXXXDKA-----LLRRANEHL 633
           MD D PSS  RKV+FAPK P  +S+R  KPK+           ++A     LL R NE+L
Sbjct: 1   MDVDGPSSGRRKVRFAPKAP--QSSR--KPKLAVAKSETSDEDEEAAQAQYLLGRFNENL 56

Query: 632 TRRRPKAEKKSSVQVAFSHGV-GSNSVRSFGKQRE-RKDDQCDATGLRDLASDGIENPVN 459
           TR++PK EKKSSVQ+AF  G   S S+RS+G +R  R  D   +T   D           
Sbjct: 57  TRQKPKVEKKSSVQIAFGPGAPSSTSLRSYGNKRAGRILDDSSSTSKEDC---------- 106

Query: 458 LPSTDTGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDEAEF 279
                T +C +  D+  A   + K EY+E WDY R+YYP TLPLR+PYSGDPELLDEAEF
Sbjct: 107 -----TDICSS--DAIEAPAPRVKSEYREPWDYNRTYYPTTLPLRRPYSGDPELLDEAEF 159

Query: 278 GKAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADHLKS 99
            + A K EYDE   N ASDLGLLE  DK +MLFFQ P NLP  KQP S   ++ A+H  S
Sbjct: 160 VETAKK-EYDETTINPASDLGLLE-GDKQKMLFFQFPGNLPRIKQPVSKKGKEKAEHSVS 217

Query: 98  S 96
           S
Sbjct: 218 S 218


>ref|XP_002510979.1| DNA binding protein, putative [Ricinus communis]
           gi|223550094|gb|EEF51581.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 328

 Score =  184 bits (466), Expect = 1e-43
 Identities = 106/235 (45%), Positives = 143/235 (60%), Gaps = 6/235 (2%)
 Frame = -3

Query: 797 MDPDPPSSNPRKVKFAPKGPPRRSTRQIKPKIXXXXXXXXXXXD---KALLRRANEHLTR 627
           MD + PS + RKVKF PK P +R  R+  PK                + L+R+ NE+  R
Sbjct: 1   MDDEQPSPSQRKVKFTPKAPSQRRPRRTVPKTEVNGVDNNEDEAVQAQKLMRKFNENFRR 60

Query: 626 RRPKAEKKSSVQVAFSHGV-GSNSVRSFGKQRERKDDQCDATGLRDLASDGIENPVNLPS 450
           + P+ EKKS+VQVAF  G   S S+R+FG     K +   ++G++D   D  +  ++  S
Sbjct: 61  QGPRVEKKSTVQVAFGPGATSSTSIRTFGVS---KGENPVSSGIKDSTDDDGKIVISSLS 117

Query: 449 TDTG--VCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDEAEFG 276
           TD    +    ++   AL  K K +Y+E WDY R+YYP TLPLR+PYSGDP LLDEAEFG
Sbjct: 118 TDKEDEIINCASEDIDALPLKIKKDYREPWDYDRTYYPTTLPLRRPYSGDPVLLDEAEFG 177

Query: 275 KAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTAD 111
           +AA KLEYDE+  N ASDL LLE+ D  +M+FFQLP  LPL K+ AS   ++ A+
Sbjct: 178 EAARKLEYDESTMNPASDLELLEECDTEKMIFFQLPAKLPLVKRSASAKGKEKAE 232


>ref|XP_007038340.1| DNA binding protein, putative isoform 2 [Theobroma cacao]
           gi|508775585|gb|EOY22841.1| DNA binding protein,
           putative isoform 2 [Theobroma cacao]
          Length = 328

 Score =  184 bits (466), Expect = 1e-43
 Identities = 113/244 (46%), Positives = 150/244 (61%), Gaps = 10/244 (4%)
 Frame = -3

Query: 797 MDPDPPSSNPRKVKFAPKGPPRRSTRQIKP---KIXXXXXXXXXXXDKALLRRANEHLTR 627
           MD D PSS  RKV+FAPK P  +S+R++K    K             + LL R NE+ TR
Sbjct: 1   MDQDGPSSGRRKVRFAPKAP--QSSRRLKTTVSKSEVNDEDGEAAQAQYLLGRFNENQTR 58

Query: 626 RRPKAEKKSSVQVAFSHGV-GSNSVRSFGKQRERKDDQCDATGLRDLASDGIENPV--NL 456
           +RPK EKKSS Q++F  G   SN +R++G QR     +  +T  R  + D  +  +  + 
Sbjct: 59  QRPKVEKKSSAQISFGPGAPSSNLLRAYGSQRGGTSGK--STDSRQRSPDDNDGQIIGSF 116

Query: 455 PSTD----TGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDE 288
           PS      T +C +  D+  A   K K EY+E WDY  +YYP+TLPLR+PYSGDPELLD+
Sbjct: 117 PSASKEDRTDICSS--DAIEASAPKIKREYREPWDYHHTYYPITLPLRRPYSGDPELLDQ 174

Query: 287 AEFGKAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADH 108
           AEF +AA K EYDE   N ASDLGLLE+ +K +M FFQLP NLP+ K+ AS   ++ A++
Sbjct: 175 AEFVEAARK-EYDEKTINPASDLGLLEEGEKGKMFFFQLPANLPVIKRLASTKGKEKAEN 233

Query: 107 LKSS 96
           L SS
Sbjct: 234 LGSS 237


>ref|XP_012090466.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 isoform X1
           [Jatropha curcas]
          Length = 350

 Score =  177 bits (450), Expect = 7e-42
 Identities = 103/249 (41%), Positives = 137/249 (55%), Gaps = 6/249 (2%)
 Frame = -3

Query: 839 FAEKLLLQFTLIHSMDPDPPSSNPRKVKFAPKGPPRRSTRQIKPKIXXXXXXXXXXXD-- 666
           F+   L   +    MD + PS  PRK KF PK PP+R       K               
Sbjct: 6   FSNNFLFSPSSFAGMDQEQPSPTPRKAKFTPKAPPQRKPIPTVTKSEVNDSNNDEDEAAQ 65

Query: 665 -KALLRRANEHLTRRRPKAEKKSSVQVAFSHGVG-SNSVRSFGKQRERKDDQCDATGLRD 492
            + L+R+ NE+L R+ PK EKKSSVQVAF  G   S S+R +G              ++D
Sbjct: 66  AQKLMRKFNENLRRKVPKVEKKSSVQVAFGPGAAPSTSIRKYGVPGCENAGSSSRLDIKD 125

Query: 491 LASDGIENPVNLPST--DTGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQP 318
             +D     V+  ST  + G  +  +++   L  K K +Y+E WDY  +YYP TLPLR+P
Sbjct: 126 SDNDDRRIVVSSLSTAEEDGASKYHSEAIGVLPLKIKKDYREPWDYNHTYYPTTLPLRRP 185

Query: 317 YSGDPELLDEAEFGKAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPA 138
           YSGDPELL+E EFG+AA KLEY+EN    ASDLGLLE+ DK ++ FFQLP  LPL K+ A
Sbjct: 186 YSGDPELLNEEEFGEAARKLEYNENTIKPASDLGLLEESDKERLFFFQLPSKLPLVKRSA 245

Query: 137 SVSRRDTAD 111
               ++  +
Sbjct: 246 ITKGKEKVE 254


>gb|KDP22444.1| hypothetical protein JCGZ_26275 [Jatropha curcas]
          Length = 331

 Score =  176 bits (446), Expect = 2e-41
 Identities = 101/235 (42%), Positives = 133/235 (56%), Gaps = 6/235 (2%)
 Frame = -3

Query: 797 MDPDPPSSNPRKVKFAPKGPPRRSTRQIKPKIXXXXXXXXXXXD---KALLRRANEHLTR 627
           MD + PS  PRK KF PK PP+R       K                + L+R+ NE+L R
Sbjct: 1   MDQEQPSPTPRKAKFTPKAPPQRKPIPTVTKSEVNDSNNDEDEAAQAQKLMRKFNENLRR 60

Query: 626 RRPKAEKKSSVQVAFSHGVG-SNSVRSFGKQRERKDDQCDATGLRDLASDGIENPVNLPS 450
           + PK EKKSSVQVAF  G   S S+R +G              ++D  +D     V+  S
Sbjct: 61  KVPKVEKKSSVQVAFGPGAAPSTSIRKYGVPGCENAGSSSRLDIKDSDNDDRRIVVSSLS 120

Query: 449 T--DTGVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDEAEFG 276
           T  + G  +  +++   L  K K +Y+E WDY  +YYP TLPLR+PYSGDPELL+E EFG
Sbjct: 121 TAEEDGASKYHSEAIGVLPLKIKKDYREPWDYNHTYYPTTLPLRRPYSGDPELLNEEEFG 180

Query: 275 KAAAKLEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTAD 111
           +AA KLEY+EN    ASDLGLLE+ DK ++ FFQLP  LPL K+ A    ++  +
Sbjct: 181 EAARKLEYNENTIKPASDLGLLEESDKERLFFFQLPSKLPLVKRSAITKGKEKVE 235


>ref|XP_010035038.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like
           [Eucalyptus grandis] gi|629079862|gb|KCW46307.1|
           hypothetical protein EUGRSUZ_K00171 [Eucalyptus grandis]
          Length = 331

 Score =  171 bits (432), Expect = 8e-40
 Identities = 102/235 (43%), Positives = 133/235 (56%), Gaps = 11/235 (4%)
 Frame = -3

Query: 767 RKVKFAPKGP-PRRSTRQIKPKIXXXXXXXXXXXD-----KALLRRANEHLTRRRPKAEK 606
           RKVKF PK P PR+    + PK                  + LLRR NE+  ++  +   
Sbjct: 7   RKVKFTPKAPAPRKKPPTVSPKTEANGGDGGEEAAVEAEAQMLLRRFNENFGQQGARVGN 66

Query: 605 KSSVQVAFSHGVGSNS--VRSFGKQRERKDDQCDATGLRDLAS---DGIENPVNLPSTDT 441
           KSSVQVAF  G  S++  +R+FG  +E + DQ     LR  A+     I  P+   +  T
Sbjct: 67  KSSVQVAFGPGAPSSASTIRTFGVPKEERSDQGCGPRLRSYAAAKGQTISPPIVAETDAT 126

Query: 440 GVCETFTDSTSALLSKKKGEYKELWDYRRSYYPVTLPLRQPYSGDPELLDEAEFGKAAAK 261
               T  D+T+ +  K K EYKE WD+  SYYP TLPLR PYSGDPE+L+E EFG+A   
Sbjct: 127 DA--TMEDATAEVPRKSKKEYKEPWDFHHSYYPTTLPLRMPYSGDPEILNEKEFGEATRN 184

Query: 260 LEYDENATNSASDLGLLEKDDKPQMLFFQLPPNLPLSKQPASVSRRDTADHLKSS 96
            EYDE   N+ASDLGLLE   + +MLFFQLPPNLP  ++  SV  ++ A+   SS
Sbjct: 185 FEYDEGIINAASDLGLLEDSGRGKMLFFQLPPNLPSVRRSTSVKGKEKAESSASS 239


>ref|XP_007038339.1| DNA binding protein, putative isoform 1 [Theobroma cacao]
           gi|508775584|gb|EOY22840.1| DNA binding protein,
           putative isoform 1 [Theobroma cacao]
          Length = 359

 Score =  167 bits (424), Expect = 7e-39
 Identities = 113/275 (41%), Positives = 150/275 (54%), Gaps = 41/275 (14%)
 Frame = -3

Query: 797 MDPDPPSSNPRKVKFAPKGPPRRSTRQIKP---KIXXXXXXXXXXXDKALLRRANEHLTR 627
           MD D PSS  RKV+FAPK P  +S+R++K    K             + LL R NE+ TR
Sbjct: 1   MDQDGPSSGRRKVRFAPKAP--QSSRRLKTTVSKSEVNDEDGEAAQAQYLLGRFNENQTR 58

Query: 626 RRPKAEKKSSVQVAFSHGV-GSNSVRSFGKQRERKDDQCDATGLRDLASDGIENPV--NL 456
           +RPK EKKSS Q++F  G   SN +R++G QR     +  +T  R  + D  +  +  + 
Sbjct: 59  QRPKVEKKSSAQISFGPGAPSSNLLRAYGSQRGGTSGK--STDSRQRSPDDNDGQIIGSF 116

Query: 455 PSTD----TGVCETFTDSTSALLSKKKGEYKELW-------------------------- 366
           PS      T +C +  D+  A   K K EY+E W                          
Sbjct: 117 PSASKEDRTDICSS--DAIEASAPKIKREYREPWVKVCSLFVCLRPSAHLCAIPLILLSS 174

Query: 365 -----DYRRSYYPVTLPLRQPYSGDPELLDEAEFGKAAAKLEYDENATNSASDLGLLEKD 201
                DY  +YYP+TLPLR+PYSGDPELLD+AEF +AA K EYDE   N ASDLGLLE+ 
Sbjct: 175 MIALQDYHHTYYPITLPLRRPYSGDPELLDQAEFVEAARK-EYDEKTINPASDLGLLEEG 233

Query: 200 DKPQMLFFQLPPNLPLSKQPASVSRRDTADHLKSS 96
           +K +M FFQLP NLP+ K+ AS   ++ A++L SS
Sbjct: 234 EKGKMFFFQLPANLPVIKRLASTKGKEKAENLGSS 268