BLASTX nr result

ID: Forsythia23_contig00025805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00025805
         (470 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP01678.1| unnamed protein product [Coffea canephora]             89   1e-15
ref|XP_012086107.1| PREDICTED: pre-mRNA-splicing factor 38B isof...    81   3e-13
ref|XP_011005920.1| PREDICTED: pre-mRNA-splicing factor 38B-like...    81   3e-13
gb|KGN50931.1| hypothetical protein Csa_5G348070 [Cucumis sativus]     81   3e-13
ref|XP_012086106.1| PREDICTED: pre-mRNA-splicing factor 38B isof...    81   3e-13
ref|XP_002305255.1| pre-mRNA splicing factor PRP38 family protei...    81   3e-13
ref|XP_011655154.1| PREDICTED: pre-mRNA-splicing factor 38B [Cuc...    81   3e-13
ref|XP_006384124.1| hypothetical protein POPTR_0004s07420g [Popu...    81   3e-13
gb|KJB22759.1| hypothetical protein B456_004G064700 [Gossypium r...    80   4e-13
ref|XP_012473672.1| PREDICTED: pre-mRNA-splicing factor 38B isof...    80   4e-13
ref|XP_012473671.1| PREDICTED: pre-mRNA-splicing factor 38B isof...    80   4e-13
gb|KJB22755.1| hypothetical protein B456_004G064700 [Gossypium r...    80   4e-13
ref|XP_004236682.1| PREDICTED: pre-mRNA-splicing factor 38B [Sol...    80   4e-13
ref|XP_011100064.1| PREDICTED: pre-mRNA-splicing factor 38B-like...    80   5e-13
ref|XP_011011355.1| PREDICTED: pre-mRNA-splicing factor 38B-like...    80   5e-13
ref|XP_011038401.1| PREDICTED: pre-mRNA-splicing factor 38B-like...    80   5e-13
ref|XP_011085891.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...    80   7e-13
ref|XP_010682209.1| PREDICTED: pre-mRNA-splicing factor 38B isof...    79   9e-13
ref|XP_010682208.1| PREDICTED: pre-mRNA-splicing factor 38B isof...    79   9e-13
ref|XP_010682207.1| PREDICTED: pre-mRNA-splicing factor 38B isof...    79   9e-13

>emb|CDP01678.1| unnamed protein product [Coffea canephora]
          Length = 406

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 43/64 (67%), Positives = 49/64 (76%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDRENNXXXXXXXXXXXXXDLSD 181
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRT+PP SYDR++              +LSD
Sbjct: 196 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTIPPPSYDRDDGSRRSPSGRRSQSRELSD 255

Query: 182 REYI 193
           R+YI
Sbjct: 256 RDYI 259


>ref|XP_012086107.1| PREDICTED: pre-mRNA-splicing factor 38B isoform X2 [Jatropha
           curcas] gi|802726852|ref|XP_012086108.1| PREDICTED:
           pre-mRNA-splicing factor 38B isoform X2 [Jatropha
           curcas]
          Length = 350

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 42/64 (65%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDR-ENNXXXXXXXXXXXXXDLS 178
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRTLPP SYDR  ++             + S
Sbjct: 130 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPSYDRGSDDPRRSPSNRRSQSHEYS 189

Query: 179 DREY 190
           D+EY
Sbjct: 190 DKEY 193


>ref|XP_011005920.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Populus euphratica]
           gi|743923645|ref|XP_011005921.1| PREDICTED:
           pre-mRNA-splicing factor 38B-like [Populus euphratica]
          Length = 429

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 42/63 (66%), Positives = 47/63 (74%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDRENNXXXXXXXXXXXXXDLSD 181
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRTLPP SYDR ++             + SD
Sbjct: 196 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPSYDRTSD---DPRNHRSQSREYSD 252

Query: 182 REY 190
           +EY
Sbjct: 253 KEY 255


>gb|KGN50931.1| hypothetical protein Csa_5G348070 [Cucumis sativus]
          Length = 363

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDRENN 130
           RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLP S+ DR+NN
Sbjct: 121 RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSANDRDNN 163


>ref|XP_012086106.1| PREDICTED: pre-mRNA-splicing factor 38B isoform X1 [Jatropha
           curcas] gi|643713029|gb|KDP26015.1| hypothetical protein
           JCGZ_21048 [Jatropha curcas]
          Length = 416

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 42/64 (65%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDR-ENNXXXXXXXXXXXXXDLS 178
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRTLPP SYDR  ++             + S
Sbjct: 196 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPSYDRGSDDPRRSPSNRRSQSHEYS 255

Query: 179 DREY 190
           D+EY
Sbjct: 256 DKEY 259


>ref|XP_002305255.1| pre-mRNA splicing factor PRP38 family protein [Populus trichocarpa]
           gi|222848219|gb|EEE85766.1| pre-mRNA splicing factor
           PRP38 family protein [Populus trichocarpa]
          Length = 397

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 42/63 (66%), Positives = 47/63 (74%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDRENNXXXXXXXXXXXXXDLSD 181
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRTLPP SYDR ++             + SD
Sbjct: 196 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPSYDRTSD---DPRSHRSQSREYSD 252

Query: 182 REY 190
           +EY
Sbjct: 253 KEY 255


>ref|XP_011655154.1| PREDICTED: pre-mRNA-splicing factor 38B [Cucumis sativus]
           gi|778702204|ref|XP_011655155.1| PREDICTED:
           pre-mRNA-splicing factor 38B [Cucumis sativus]
          Length = 438

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDRENN 130
           RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLP S+ DR+NN
Sbjct: 196 RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSANDRDNN 238


>ref|XP_006384124.1| hypothetical protein POPTR_0004s07420g [Populus trichocarpa]
           gi|118481208|gb|ABK92555.1| unknown [Populus
           trichocarpa] gi|550340532|gb|ERP61921.1| hypothetical
           protein POPTR_0004s07420g [Populus trichocarpa]
          Length = 427

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 42/63 (66%), Positives = 47/63 (74%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDRENNXXXXXXXXXXXXXDLSD 181
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRTLPP SYDR ++             + SD
Sbjct: 196 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPSYDRTSD---DPRSHRSQSREYSD 252

Query: 182 REY 190
           +EY
Sbjct: 253 KEY 255


>gb|KJB22759.1| hypothetical protein B456_004G064700 [Gossypium raimondii]
          Length = 402

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDREN 127
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRTLPPS YDR +
Sbjct: 179 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPSPYDRSS 220


>ref|XP_012473672.1| PREDICTED: pre-mRNA-splicing factor 38B isoform X2 [Gossypium
           raimondii] gi|763755427|gb|KJB22758.1| hypothetical
           protein B456_004G064700 [Gossypium raimondii]
           gi|763755429|gb|KJB22760.1| hypothetical protein
           B456_004G064700 [Gossypium raimondii]
          Length = 365

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDREN 127
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRTLPPS YDR +
Sbjct: 142 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPSPYDRSS 183


>ref|XP_012473671.1| PREDICTED: pre-mRNA-splicing factor 38B isoform X1 [Gossypium
           raimondii] gi|763755426|gb|KJB22757.1| hypothetical
           protein B456_004G064700 [Gossypium raimondii]
           gi|763755430|gb|KJB22761.1| hypothetical protein
           B456_004G064700 [Gossypium raimondii]
          Length = 419

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDREN 127
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRTLPPS YDR +
Sbjct: 196 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPSPYDRSS 237


>gb|KJB22755.1| hypothetical protein B456_004G064700 [Gossypium raimondii]
           gi|763755425|gb|KJB22756.1| hypothetical protein
           B456_004G064700 [Gossypium raimondii]
          Length = 248

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDREN 127
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRTLPPS YDR +
Sbjct: 25  RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPSPYDRSS 66


>ref|XP_004236682.1| PREDICTED: pre-mRNA-splicing factor 38B [Solanum lycopersicum]
          Length = 444

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 42/64 (65%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDRE--NNXXXXXXXXXXXXXDL 175
           RPPSVKASLSVSFGQRAPHRASTRDSSP+RRT+ P SYD++  N              DL
Sbjct: 196 RPPSVKASLSVSFGQRAPHRASTRDSSPIRRTIAPPSYDKDGANGSRRSPSMRRSQSRDL 255

Query: 176 SDRE 187
           SDRE
Sbjct: 256 SDRE 259


>ref|XP_011100064.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Sesamum indicum]
          Length = 415

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 42/63 (66%), Positives = 47/63 (74%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDRENNXXXXXXXXXXXXXDLSD 181
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRT  P SYDR+++             D+SD
Sbjct: 196 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTSTP-SYDRDDDSRRSSNRRRSQSRDVSD 254

Query: 182 REY 190
           REY
Sbjct: 255 REY 257


>ref|XP_011011355.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Populus euphratica]
           gi|743934070|ref|XP_011011357.1| PREDICTED:
           pre-mRNA-splicing factor 38B-like [Populus euphratica]
          Length = 436

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 41/63 (65%), Positives = 47/63 (74%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDRENNXXXXXXXXXXXXXDLSD 181
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRT+PP SYDR ++             + SD
Sbjct: 196 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTIPPPSYDRTSD---EPRSLLGQSREYSD 252

Query: 182 REY 190
           +EY
Sbjct: 253 KEY 255


>ref|XP_011038401.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Populus euphratica]
           gi|743888283|ref|XP_011038402.1| PREDICTED:
           pre-mRNA-splicing factor 38B-like [Populus euphratica]
           gi|743888285|ref|XP_011038403.1| PREDICTED:
           pre-mRNA-splicing factor 38B-like [Populus euphratica]
          Length = 438

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 41/63 (65%), Positives = 47/63 (74%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDRENNXXXXXXXXXXXXXDLSD 181
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRT+PP SYDR ++             + SD
Sbjct: 196 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTIPPPSYDRTSD---EPRSLLGQSREYSD 252

Query: 182 REY 190
           +EY
Sbjct: 253 KEY 255


>ref|XP_011085891.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor 38B-like
           [Sesamum indicum]
          Length = 435

 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 42/62 (67%), Positives = 47/62 (75%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDRENNXXXXXXXXXXXXXDLSD 181
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRRT+ P SYDR+++             DLSD
Sbjct: 196 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRTVTP-SYDRDDDSRRSPNRHRSQSRDLSD 254

Query: 182 RE 187
           RE
Sbjct: 255 RE 256


>ref|XP_010682209.1| PREDICTED: pre-mRNA-splicing factor 38B isoform X5 [Beta vulgaris
           subsp. vulgaris] gi|870856130|gb|KMT07818.1|
           hypothetical protein BVRB_6g146300 [Beta vulgaris subsp.
           vulgaris]
          Length = 435

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 42/65 (64%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDR--ENNXXXXXXXXXXXXXDL 175
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRR LPP  YDR    +             DL
Sbjct: 197 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRALPPPPYDRGGSEDSRRSPSRHRSQSRDL 256

Query: 176 SDREY 190
           S+REY
Sbjct: 257 SEREY 261


>ref|XP_010682208.1| PREDICTED: pre-mRNA-splicing factor 38B isoform X4 [Beta vulgaris
           subsp. vulgaris]
          Length = 475

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 42/65 (64%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDR--ENNXXXXXXXXXXXXXDL 175
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRR LPP  YDR    +             DL
Sbjct: 237 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRALPPPPYDRGGSEDSRRSPSRHRSQSRDL 296

Query: 176 SDREY 190
           S+REY
Sbjct: 297 SEREY 301


>ref|XP_010682207.1| PREDICTED: pre-mRNA-splicing factor 38B isoform X3 [Beta vulgaris
           subsp. vulgaris]
          Length = 478

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 42/65 (64%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
 Frame = +2

Query: 2   RPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSSYDR--ENNXXXXXXXXXXXXXDL 175
           RPPSVKA+LSVSFGQRAPHRASTRDSSPVRR LPP  YDR    +             DL
Sbjct: 240 RPPSVKAALSVSFGQRAPHRASTRDSSPVRRALPPPPYDRGGSEDSRRSPSRHRSQSRDL 299

Query: 176 SDREY 190
           S+REY
Sbjct: 300 SEREY 304


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