BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00025763
         (1025 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP06761.1| unnamed protein product [Coffea canephora]            408   e-111
ref|XP_011094632.1| PREDICTED: RNA polymerase sigma factor sigF,...   403   e-110
ref|XP_011094631.1| PREDICTED: RNA polymerase sigma factor sigF,...   403   e-110
ref|XP_012840944.1| PREDICTED: RNA polymerase sigma factor sigF,...   393   e-106
ref|XP_012840943.1| PREDICTED: RNA polymerase sigma factor sigF,...   393   e-106
gb|KHG05515.1| RNA polymerase sigma factor rpoD [Gossypium arbor...   390   e-106
ref|XP_012443172.1| PREDICTED: RNA polymerase sigma factor sigF,...   390   e-105
ref|XP_012443171.1| PREDICTED: RNA polymerase sigma factor sigF,...   390   e-105
ref|XP_012443173.1| PREDICTED: RNA polymerase sigma factor sigF,...   390   e-105
ref|XP_012443174.1| PREDICTED: RNA polymerase sigma factor sigF,...   390   e-105
gb|AKC88770.1| sigma factor [Francoa sonchifolia]                     387   e-105
ref|XP_009794392.1| PREDICTED: RNA polymerase sigma factor sigF,...   387   e-105
ref|XP_009794385.1| PREDICTED: RNA polymerase sigma factor sigF,...   387   e-105
ref|XP_009621232.1| PREDICTED: RNA polymerase sigma factor sigF,...   385   e-104
ref|XP_008243975.1| PREDICTED: RNA polymerase sigma factor sigF,...   384   e-104
ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prun...   384   e-104
ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF,...   383   e-103
ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [...   381   e-103
ref|XP_008359645.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   380   e-103
gb|AKC88774.1| sigma factor [Melianthus villosus]                     380   e-102

>emb|CDP06761.1| unnamed protein product [Coffea canephora]
          Length = 556

 Score =  408 bits (1048), Expect = e-111
 Identities = 202/244 (82%), Positives = 223/244 (91%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            G  SREKLIYAN RMVVHIA+QY GRGLSLQDLLQEGS GLMRS+EKFKPQVGCRFATYA
Sbjct: 313  GNRSREKLIYANHRMVVHIARQYMGRGLSLQDLLQEGSMGLMRSIEKFKPQVGCRFATYA 372

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQAIRKAIFQHSRTIRLP+NVYGLLSKV+EAKK+CIQ+G H P KEEIA+ AGITV
Sbjct: 373  YWWIRQAIRKAIFQHSRTIRLPDNVYGLLSKVKEAKKLCIQQGIHSPTKEEIASCAGITV 432

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            EKL++LLFTARMPLSMQQPVWMDQ+TTFQE+TAD  +E  D+SVSKQLMR HIRNLL +L
Sbjct: 433  EKLEKLLFTARMPLSMQQPVWMDQDTTFQEVTADTAIEASDLSVSKQLMRIHIRNLLRIL 492

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            +PKERKIIRLRFGIED  QKSLSEIG +FGLSKERVRQLE+RALYKLKQ L+S GL AY+
Sbjct: 493  NPKERKIIRLRFGIEDGKQKSLSEIGAVFGLSKERVRQLETRALYKLKQCLNSQGLNAYA 552

Query: 305  DMII 294
            DM++
Sbjct: 553  DMLL 556


>ref|XP_011094632.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Sesamum indicum] gi|747093636|ref|XP_011094633.1|
            PREDICTED: RNA polymerase sigma factor sigF,
            chloroplastic isoform X2 [Sesamum indicum]
          Length = 496

 Score =  403 bits (1036), Expect = e-110
 Identities = 203/244 (83%), Positives = 223/244 (91%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            G SSR+KLI ANFRMVVHIAKQYQGRGLSLQDLLQEGS GLMRSVEKFKPQ GCRFATYA
Sbjct: 253  GDSSRQKLICANFRMVVHIAKQYQGRGLSLQDLLQEGSMGLMRSVEKFKPQAGCRFATYA 312

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ+IRKA+FQHSRTIRLPENVY LLS+V EAKK+CIQ+GNH P KE+IAA AG++V
Sbjct: 313  YWWIRQSIRKALFQHSRTIRLPENVYSLLSRVYEAKKLCIQQGNHLPTKEDIAACAGMSV 372

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            E L+RLL+TARMPLS+Q+PVW DQ+TTFQEITAD T+EVPDV V+KQLMR+HIRNLLSVL
Sbjct: 373  EGLERLLYTARMPLSLQKPVWTDQDTTFQEITADTTIEVPDVGVAKQLMRQHIRNLLSVL 432

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            SP+ERKIIRLRFGIE   QKSLSEIG  FGLSKERVRQLESRALYKLKQ L SHGL AY+
Sbjct: 433  SPRERKIIRLRFGIEHGEQKSLSEIGAGFGLSKERVRQLESRALYKLKQCLGSHGLAAYA 492

Query: 305  DMII 294
            +MII
Sbjct: 493  NMII 496


>ref|XP_011094631.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Sesamum indicum]
          Length = 561

 Score =  403 bits (1036), Expect = e-110
 Identities = 203/244 (83%), Positives = 223/244 (91%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            G SSR+KLI ANFRMVVHIAKQYQGRGLSLQDLLQEGS GLMRSVEKFKPQ GCRFATYA
Sbjct: 318  GDSSRQKLICANFRMVVHIAKQYQGRGLSLQDLLQEGSMGLMRSVEKFKPQAGCRFATYA 377

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ+IRKA+FQHSRTIRLPENVY LLS+V EAKK+CIQ+GNH P KE+IAA AG++V
Sbjct: 378  YWWIRQSIRKALFQHSRTIRLPENVYSLLSRVYEAKKLCIQQGNHLPTKEDIAACAGMSV 437

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            E L+RLL+TARMPLS+Q+PVW DQ+TTFQEITAD T+EVPDV V+KQLMR+HIRNLLSVL
Sbjct: 438  EGLERLLYTARMPLSLQKPVWTDQDTTFQEITADTTIEVPDVGVAKQLMRQHIRNLLSVL 497

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            SP+ERKIIRLRFGIE   QKSLSEIG  FGLSKERVRQLESRALYKLKQ L SHGL AY+
Sbjct: 498  SPRERKIIRLRFGIEHGEQKSLSEIGAGFGLSKERVRQLESRALYKLKQCLGSHGLAAYA 557

Query: 305  DMII 294
            +MII
Sbjct: 558  NMII 561


>ref|XP_012840944.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Erythranthe guttatus]
          Length = 558

 Score =  393 bits (1009), Expect = e-106
 Identities = 192/244 (78%), Positives = 221/244 (90%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            G  SREKLIYANFR+VV+IAKQYQGRGL+LQDLLQ GS GLM+SVEKFKP VGCRFATYA
Sbjct: 315  GNFSREKLIYANFRLVVYIAKQYQGRGLNLQDLLQLGSMGLMKSVEKFKPLVGCRFATYA 374

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ+IRK++FQHSRTIRLPENVY LLSKV EAKK CI++GNH+P KE+IAA AG++V
Sbjct: 375  YWWIRQSIRKSLFQHSRTIRLPENVYTLLSKVYEAKKTCIKQGNHQPTKEDIAAAAGLSV 434

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            EKLDRLL+T+R+PLSMQ+PVWMDQ+TTFQEITAD  VE PDV  SKQ+MR+H RNLLSVL
Sbjct: 435  EKLDRLLYTSRVPLSMQKPVWMDQDTTFQEITADTAVEAPDVGASKQIMRQHTRNLLSVL 494

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            +P+ERKIIRLRFGIED  QKSLS+IG  FGLSKER+RQ+ESRALYKLKQ L SHGL AY+
Sbjct: 495  NPRERKIIRLRFGIEDGEQKSLSDIGAGFGLSKERIRQIESRALYKLKQCLSSHGLSAYA 554

Query: 305  DMII 294
            +M++
Sbjct: 555  EMLV 558


>ref|XP_012840943.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Erythranthe guttatus] gi|604329105|gb|EYU34473.1|
            hypothetical protein MIMGU_mgv1a003862mg [Erythranthe
            guttata]
          Length = 559

 Score =  393 bits (1009), Expect = e-106
 Identities = 192/244 (78%), Positives = 221/244 (90%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            G  SREKLIYANFR+VV+IAKQYQGRGL+LQDLLQ GS GLM+SVEKFKP VGCRFATYA
Sbjct: 316  GNFSREKLIYANFRLVVYIAKQYQGRGLNLQDLLQLGSMGLMKSVEKFKPLVGCRFATYA 375

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ+IRK++FQHSRTIRLPENVY LLSKV EAKK CI++GNH+P KE+IAA AG++V
Sbjct: 376  YWWIRQSIRKSLFQHSRTIRLPENVYTLLSKVYEAKKTCIKQGNHQPTKEDIAAAAGLSV 435

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            EKLDRLL+T+R+PLSMQ+PVWMDQ+TTFQEITAD  VE PDV  SKQ+MR+H RNLLSVL
Sbjct: 436  EKLDRLLYTSRVPLSMQKPVWMDQDTTFQEITADTAVEAPDVGASKQIMRQHTRNLLSVL 495

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            +P+ERKIIRLRFGIED  QKSLS+IG  FGLSKER+RQ+ESRALYKLKQ L SHGL AY+
Sbjct: 496  NPRERKIIRLRFGIEDGEQKSLSDIGAGFGLSKERIRQIESRALYKLKQCLSSHGLSAYA 555

Query: 305  DMII 294
            +M++
Sbjct: 556  EMLV 559


>gb|KHG05515.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 567

 Score =  390 bits (1002), Expect = e-106
 Identities = 192/244 (78%), Positives = 215/244 (88%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            GK SREKLI+AN RMVVHIAKQYQGRGLSLQDLLQEGS GLM+SVEKFKPQVGCRF TYA
Sbjct: 324  GKRSREKLIHANLRMVVHIAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQVGCRFGTYA 383

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ I K+I QHSRTIRLPENVYGLLSKV +AK+ CIQ+GNH P KEE+A   GITV
Sbjct: 384  YWWIRQTITKSILQHSRTIRLPENVYGLLSKVLDAKRSCIQEGNHYPSKEELARRVGITV 443

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            EKLD+LL + RMPLSMQQPVW+DQ+TTFQE+T D  +E+PDVSV+KQLMR+H+RNLLS+L
Sbjct: 444  EKLDKLLLSTRMPLSMQQPVWVDQDTTFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSIL 503

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            SPKERKIIRLRFGIE+  Q SLSEIG +F LSKERVRQLESRALYKLKQ L   GLGAY 
Sbjct: 504  SPKERKIIRLRFGIEESKQNSLSEIGKMFRLSKERVRQLESRALYKLKQCLVKQGLGAYE 563

Query: 305  DMII 294
            D+++
Sbjct: 564  DLLV 567


>ref|XP_012443172.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Gossypium raimondii]
          Length = 570

 Score =  390 bits (1001), Expect = e-105
 Identities = 192/244 (78%), Positives = 215/244 (88%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            GK SREKLI+AN RMVVHIAKQYQGRGLSLQDLLQEGS GLM+SVEKFKPQVGCRFATYA
Sbjct: 327  GKRSREKLIHANLRMVVHIAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQVGCRFATYA 386

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ I K+I QHSRTIRLPENVYGLLSKV +AK+ C Q+GNH P KEE+A   GITV
Sbjct: 387  YWWIRQTITKSIMQHSRTIRLPENVYGLLSKVLDAKRSCFQEGNHYPSKEELARRVGITV 446

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            EKLD+LL ++RMPLSMQQPVW DQ+TTFQE+T D  +E+PDVSV+KQLMR+H+RNLLS+L
Sbjct: 447  EKLDKLLLSSRMPLSMQQPVWADQDTTFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSIL 506

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            SPKERKIIRLRFGIE+  Q SLSEIG +F LSKERVRQLESRALYKLKQ L   GLGAY 
Sbjct: 507  SPKERKIIRLRFGIEESKQNSLSEIGKMFRLSKERVRQLESRALYKLKQCLVKQGLGAYE 566

Query: 305  DMII 294
            D+++
Sbjct: 567  DLLV 570


>ref|XP_012443171.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Gossypium raimondii]
          Length = 572

 Score =  390 bits (1001), Expect = e-105
 Identities = 192/244 (78%), Positives = 215/244 (88%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            GK SREKLI+AN RMVVHIAKQYQGRGLSLQDLLQEGS GLM+SVEKFKPQVGCRFATYA
Sbjct: 329  GKRSREKLIHANLRMVVHIAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQVGCRFATYA 388

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ I K+I QHSRTIRLPENVYGLLSKV +AK+ C Q+GNH P KEE+A   GITV
Sbjct: 389  YWWIRQTITKSIMQHSRTIRLPENVYGLLSKVLDAKRSCFQEGNHYPSKEELARRVGITV 448

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            EKLD+LL ++RMPLSMQQPVW DQ+TTFQE+T D  +E+PDVSV+KQLMR+H+RNLLS+L
Sbjct: 449  EKLDKLLLSSRMPLSMQQPVWADQDTTFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSIL 508

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            SPKERKIIRLRFGIE+  Q SLSEIG +F LSKERVRQLESRALYKLKQ L   GLGAY 
Sbjct: 509  SPKERKIIRLRFGIEESKQNSLSEIGKMFRLSKERVRQLESRALYKLKQCLVKQGLGAYE 568

Query: 305  DMII 294
            D+++
Sbjct: 569  DLLV 572


>ref|XP_012443173.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X3
            [Gossypium raimondii] gi|763795411|gb|KJB62407.1|
            hypothetical protein B456_009G415400 [Gossypium
            raimondii]
          Length = 567

 Score =  390 bits (1001), Expect = e-105
 Identities = 192/244 (78%), Positives = 215/244 (88%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            GK SREKLI+AN RMVVHIAKQYQGRGLSLQDLLQEGS GLM+SVEKFKPQVGCRFATYA
Sbjct: 324  GKRSREKLIHANLRMVVHIAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQVGCRFATYA 383

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ I K+I QHSRTIRLPENVYGLLSKV +AK+ C Q+GNH P KEE+A   GITV
Sbjct: 384  YWWIRQTITKSIMQHSRTIRLPENVYGLLSKVLDAKRSCFQEGNHYPSKEELARRVGITV 443

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            EKLD+LL ++RMPLSMQQPVW DQ+TTFQE+T D  +E+PDVSV+KQLMR+H+RNLLS+L
Sbjct: 444  EKLDKLLLSSRMPLSMQQPVWADQDTTFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSIL 503

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            SPKERKIIRLRFGIE+  Q SLSEIG +F LSKERVRQLESRALYKLKQ L   GLGAY 
Sbjct: 504  SPKERKIIRLRFGIEESKQNSLSEIGKMFRLSKERVRQLESRALYKLKQCLVKQGLGAYE 563

Query: 305  DMII 294
            D+++
Sbjct: 564  DLLV 567


>ref|XP_012443174.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X4
            [Gossypium raimondii] gi|763795410|gb|KJB62406.1|
            hypothetical protein B456_009G415400 [Gossypium
            raimondii]
          Length = 565

 Score =  390 bits (1001), Expect = e-105
 Identities = 192/244 (78%), Positives = 215/244 (88%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            GK SREKLI+AN RMVVHIAKQYQGRGLSLQDLLQEGS GLM+SVEKFKPQVGCRFATYA
Sbjct: 322  GKRSREKLIHANLRMVVHIAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQVGCRFATYA 381

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ I K+I QHSRTIRLPENVYGLLSKV +AK+ C Q+GNH P KEE+A   GITV
Sbjct: 382  YWWIRQTITKSIMQHSRTIRLPENVYGLLSKVLDAKRSCFQEGNHYPSKEELARRVGITV 441

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            EKLD+LL ++RMPLSMQQPVW DQ+TTFQE+T D  +E+PDVSV+KQLMR+H+RNLLS+L
Sbjct: 442  EKLDKLLLSSRMPLSMQQPVWADQDTTFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSIL 501

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            SPKERKIIRLRFGIE+  Q SLSEIG +F LSKERVRQLESRALYKLKQ L   GLGAY 
Sbjct: 502  SPKERKIIRLRFGIEESKQNSLSEIGKMFRLSKERVRQLESRALYKLKQCLVKQGLGAYE 561

Query: 305  DMII 294
            D+++
Sbjct: 562  DLLV 565


>gb|AKC88770.1| sigma factor [Francoa sonchifolia]
          Length = 549

 Score =  387 bits (995), Expect = e-105
 Identities = 189/241 (78%), Positives = 212/241 (87%)
 Frame = -1

Query: 1016 SREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYAYWW 837
            SREKLI AN RMVVHIAKQY G+GLS  DLLQEGS GLM+SVEKFKPQ GCRFATYAYWW
Sbjct: 309  SREKLINANLRMVVHIAKQYLGKGLSFPDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWW 368

Query: 836  IRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITVEKL 657
            IRQ +RKAIFQHSRTIRLPENVY LL KV EAKK CIQ+GNHRP KEE+A   GITVEKL
Sbjct: 369  IRQTVRKAIFQHSRTIRLPENVYTLLGKVLEAKKSCIQEGNHRPTKEELARRVGITVEKL 428

Query: 656  DRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVLSPK 477
            ++LL+T RMPLSMQQPVW  Q+TTFQEI AD  +E+PD+SV KQ+MR+H+RNLLS+LSPK
Sbjct: 429  EKLLYTTRMPLSMQQPVWAGQDTTFQEIIADTEIEIPDISVGKQMMRQHVRNLLSILSPK 488

Query: 476  ERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYSDMI 297
            ER+IIRLRFGIED  QKSLSEIG +FGLSKERVRQLESRALY+LKQ L S GLGAY+D++
Sbjct: 489  ERRIIRLRFGIEDGKQKSLSEIGAVFGLSKERVRQLESRALYRLKQCLSSQGLGAYTDLL 548

Query: 296  I 294
            +
Sbjct: 549  V 549


>ref|XP_009794392.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Nicotiana sylvestris]
          Length = 545

 Score =  387 bits (994), Expect = e-105
 Identities = 190/243 (78%), Positives = 216/243 (88%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            GKSSR+KLI AN RMVVHIAKQYQGRGLSLQDLLQEGS GLM+SVEKFKPQ GCRF TYA
Sbjct: 302  GKSSRDKLINANLRMVVHIAKQYQGRGLSLQDLLQEGSVGLMKSVEKFKPQAGCRFPTYA 361

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ +RKAIFQHSRTIRLPENVY LLSKV++AKK+CIQ+GNH P +E+IA+ AG++V
Sbjct: 362  YWWIRQGVRKAIFQHSRTIRLPENVYALLSKVKDAKKLCIQQGNHHPTREDIASCAGMSV 421

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            E+L  LL  AR PLSMQQ VW DQ+ TFQEITAD  +E P++SVSKQLMRRH+RNLL+VL
Sbjct: 422  ERLQSLLSAARTPLSMQQSVWTDQDATFQEITADNAIEAPELSVSKQLMRRHVRNLLNVL 481

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            SPKERKIIRLRFGI D  +KSLSEIG +FGLSKERVRQLESRALY+LKQ+L SHGL AY+
Sbjct: 482  SPKERKIIRLRFGIGDGERKSLSEIGAVFGLSKERVRQLESRALYRLKQNLSSHGLDAYN 541

Query: 305  DMI 297
            D++
Sbjct: 542  DLL 544


>ref|XP_009794385.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Nicotiana sylvestris]
          Length = 572

 Score =  387 bits (994), Expect = e-105
 Identities = 190/243 (78%), Positives = 216/243 (88%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            GKSSR+KLI AN RMVVHIAKQYQGRGLSLQDLLQEGS GLM+SVEKFKPQ GCRF TYA
Sbjct: 329  GKSSRDKLINANLRMVVHIAKQYQGRGLSLQDLLQEGSVGLMKSVEKFKPQAGCRFPTYA 388

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ +RKAIFQHSRTIRLPENVY LLSKV++AKK+CIQ+GNH P +E+IA+ AG++V
Sbjct: 389  YWWIRQGVRKAIFQHSRTIRLPENVYALLSKVKDAKKLCIQQGNHHPTREDIASCAGMSV 448

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            E+L  LL  AR PLSMQQ VW DQ+ TFQEITAD  +E P++SVSKQLMRRH+RNLL+VL
Sbjct: 449  ERLQSLLSAARTPLSMQQSVWTDQDATFQEITADNAIEAPELSVSKQLMRRHVRNLLNVL 508

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            SPKERKIIRLRFGI D  +KSLSEIG +FGLSKERVRQLESRALY+LKQ+L SHGL AY+
Sbjct: 509  SPKERKIIRLRFGIGDGERKSLSEIGAVFGLSKERVRQLESRALYRLKQNLSSHGLDAYN 568

Query: 305  DMI 297
            D++
Sbjct: 569  DLL 571


>ref|XP_009621232.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Nicotiana
            tomentosiformis]
          Length = 544

 Score =  385 bits (988), Expect = e-104
 Identities = 190/243 (78%), Positives = 215/243 (88%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            GKSSR+KLI AN RMVVHIAKQYQGRGLSLQDLLQEGS GLM+SVEKFKPQ GCRF TYA
Sbjct: 301  GKSSRDKLINANLRMVVHIAKQYQGRGLSLQDLLQEGSVGLMKSVEKFKPQAGCRFPTYA 360

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ +RK IFQHSRTIRLPENVY LLSKV++AKK+CIQ+GN  P +E+IA+ AG++V
Sbjct: 361  YWWIRQGVRKTIFQHSRTIRLPENVYALLSKVKDAKKLCIQQGNRHPTREDIASCAGMSV 420

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            E+L  LL  AR PLSMQQ VW DQ+TTFQEITAD  +E P++SVSKQLMRRHIRNLL+VL
Sbjct: 421  ERLQSLLSAARTPLSMQQSVWTDQDTTFQEITADSAIEAPELSVSKQLMRRHIRNLLNVL 480

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            +PKERKIIRLRFGI D  +KSLSEIG +FGLSKERVRQLESRALYKLK++L SHGL AYS
Sbjct: 481  NPKERKIIRLRFGIGDGKRKSLSEIGAVFGLSKERVRQLESRALYKLKKNLSSHGLDAYS 540

Query: 305  DMI 297
            D++
Sbjct: 541  DLL 543


>ref|XP_008243975.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Prunus
            mume]
          Length = 573

 Score =  384 bits (986), Expect = e-104
 Identities = 188/244 (77%), Positives = 214/244 (87%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            G SSREKLIYAN RMVVHIAKQYQGRGL LQDL+QEGS GLM+SVEKFKPQ GCRFATYA
Sbjct: 330  GTSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYA 389

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ +RKAIFQHSRTIRLPENVY LL KV EAKK CIQ+GNH P KEE+A   GITV
Sbjct: 390  YWWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKSCIQEGNHNPNKEELAIRVGITV 449

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            EKL++LL+  RMPLSMQQPVW DQ+TTFQE+TAD  VE+PDVSV+KQLMR+H+R+LLS+L
Sbjct: 450  EKLEKLLYATRMPLSMQQPVWADQDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLSIL 509

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            + +ER+IIRLR+GIED  Q+SLSEIG +FGLSKERVRQLESRA  KL+QSL S GLGAY 
Sbjct: 510  NLRERQIIRLRYGIEDGKQRSLSEIGGMFGLSKERVRQLESRAFLKLRQSLGSQGLGAYG 569

Query: 305  DMII 294
             +++
Sbjct: 570  PLLV 573


>ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
            gi|462400636|gb|EMJ06193.1| hypothetical protein
            PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score =  384 bits (986), Expect = e-104
 Identities = 188/244 (77%), Positives = 214/244 (87%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            G SSREKLIYAN RMVVHIAKQYQGRGL LQDL+QEGS GLM+SVEKFKPQ GCRFATYA
Sbjct: 325  GTSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYA 384

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ +RKAIFQHSRTIRLPENVY LL KV EAKK CIQ+GNH P KEE+A   GITV
Sbjct: 385  YWWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKSCIQEGNHNPNKEELARRVGITV 444

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            EKL++LL+  RMPLSMQQPVW DQ+TTFQE+TAD  VE+PDVSV+KQLMR+H+R+LLS+L
Sbjct: 445  EKLEKLLYATRMPLSMQQPVWADQDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLSIL 504

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            + +ER+IIRLR+GIED  Q+SLSEIG +FGLSKERVRQLESRA  KL+QSL S GLGAY 
Sbjct: 505  NLREREIIRLRYGIEDGKQRSLSEIGGMFGLSKERVRQLESRAFLKLRQSLGSQGLGAYG 564

Query: 305  DMII 294
             +++
Sbjct: 565  PLLV 568


>ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Solanum tuberosum]
          Length = 562

 Score =  383 bits (984), Expect = e-103
 Identities = 191/243 (78%), Positives = 214/243 (88%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            GKSSREKLI AN RMVVHIAKQYQGRGL+LQDLLQEGS GLM+SVEKFKPQ GCRF TYA
Sbjct: 319  GKSSREKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYA 378

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ++RKAIFQHSRTIRLPENVY LLSKV++AKK CIQ+GN  P KE+IA+ AG++V
Sbjct: 379  YWWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKKECIQQGNRYPTKEDIASCAGMSV 438

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            E+L  LL   R PLSMQQ VW DQ+TTFQEITAD  +E P++SVSKQLMRRHIR LL+VL
Sbjct: 439  ERLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHIRGLLNVL 498

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            SPKERKIIRLRFGI D   KSLSEIGT+FGLSKERVRQLE+RALYKLKQ+L+ HGL AYS
Sbjct: 499  SPKERKIIRLRFGIGDGKPKSLSEIGTVFGLSKERVRQLETRALYKLKQNLNKHGLDAYS 558

Query: 305  DMI 297
            D++
Sbjct: 559  DLL 561


>ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
            gi|508715981|gb|EOY07878.1| RNA polymerase sigma factor
            rpoD, putative [Theobroma cacao]
          Length = 568

 Score =  381 bits (979), Expect = e-103
 Identities = 187/244 (76%), Positives = 215/244 (88%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            G SSR+KLIYAN RMVVHIAKQYQ RGLSLQDLLQEGS GLM+SVE+FKPQVGCRFATYA
Sbjct: 325  GNSSRDKLIYANLRMVVHIAKQYQSRGLSLQDLLQEGSMGLMKSVERFKPQVGCRFATYA 384

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ IRK+I QHSRT+RLPENV+ LLSKV +AKK  I++GNH P KEE+A   GITV
Sbjct: 385  YWWIRQTIRKSIMQHSRTVRLPENVHTLLSKVLDAKKSYIREGNHCPSKEELARRVGITV 444

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            EKLD+LLFT RMPLSMQQ VW+DQ+ TFQE+T D  +E+PDVSV+KQLMR+H+RNLLSVL
Sbjct: 445  EKLDKLLFTTRMPLSMQQSVWVDQDITFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSVL 504

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            SP+ER II+LRFGIE+  + SLSEIG +FGLSKERVRQLESRALYKLKQ L+ HGLGAY 
Sbjct: 505  SPRERTIIKLRFGIEESKENSLSEIGNMFGLSKERVRQLESRALYKLKQCLNKHGLGAYV 564

Query: 305  DMII 294
            D+++
Sbjct: 565  DLLV 568


>ref|XP_008359645.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase sigma factor sigF,
            chloroplastic-like [Malus domestica]
          Length = 571

 Score =  380 bits (976), Expect = e-103
 Identities = 188/244 (77%), Positives = 210/244 (86%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            G SSREKLIYAN RMVVHIAKQYQGRGL LQDL+QEGS GLM+SVEKFKPQ GCRFATYA
Sbjct: 328  GTSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYA 387

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ +RKAIFQHSRTIRLPENVY LL KV EAKK CIQ+GNH P KEE+A   GITV
Sbjct: 388  YWWIRQTVRKAIFQHSRTIRLPENVYTLLGKVLEAKKSCIQEGNHNPNKEELARRVGITV 447

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            EKL +LL++ RMPLSMQQPVW DQ+TTFQEITAD   E+P VSV KQLMR+H+R+LL +L
Sbjct: 448  EKLQKLLYSTRMPLSMQQPVWADQDTTFQEITADTGTEIPHVSVEKQLMRQHVRHLLGIL 507

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            + +ER+IIRLRFGIED  Q+SLSEIG +FGLSKERVRQLESRA  KLKQSL S GLGAY 
Sbjct: 508  NLRERQIIRLRFGIEDGKQRSLSEIGNMFGLSKERVRQLESRAFLKLKQSLGSQGLGAYG 567

Query: 305  DMII 294
             +++
Sbjct: 568  PLLV 571


>gb|AKC88774.1| sigma factor [Melianthus villosus]
          Length = 538

 Score =  380 bits (975), Expect = e-102
 Identities = 188/244 (77%), Positives = 211/244 (86%)
 Frame = -1

Query: 1025 GKSSREKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSTGLMRSVEKFKPQVGCRFATYA 846
            GK SR+KLIYAN RMVVHIAKQY GRGLS QDL QEGS GLM SVEKFKPQ GCRF TYA
Sbjct: 295  GKKSRDKLIYANLRMVVHIAKQYLGRGLSFQDLQQEGSMGLMISVEKFKPQAGCRFGTYA 354

Query: 845  YWWIRQAIRKAIFQHSRTIRLPENVYGLLSKVREAKKVCIQKGNHRPMKEEIAATAGITV 666
            YWWIRQ++RKAIFQHSRTIRLPENVYGLL+KV EAK++ IQ+GNH P KE+IA   GITV
Sbjct: 355  YWWIRQSVRKAIFQHSRTIRLPENVYGLLAKVLEAKRLYIQEGNHHPTKEDIAGRIGITV 414

Query: 665  EKLDRLLFTARMPLSMQQPVWMDQNTTFQEITADPTVEVPDVSVSKQLMRRHIRNLLSVL 486
            +KL+RLL T RMPLS+QQPVW DQNTTFQE+TAD  VE+PD+SV KQLMR+H+R LL +L
Sbjct: 415  DKLERLLATTRMPLSIQQPVWADQNTTFQEVTADTAVEIPDISVGKQLMRKHMRGLLGIL 474

Query: 485  SPKERKIIRLRFGIEDVNQKSLSEIGTIFGLSKERVRQLESRALYKLKQSLDSHGLGAYS 306
            S KER+IIRLRFGIED  QKSLSEIG IFGLSKERVRQLESRAL++LKQ L S GL AY 
Sbjct: 475  SSKERRIIRLRFGIEDGEQKSLSEIGAIFGLSKERVRQLESRALHRLKQCLSSQGLEAYV 534

Query: 305  DMII 294
            +M++
Sbjct: 535  NMLV 538