BLASTX nr result

ID: Forsythia23_contig00023496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00023496
         (309 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004498325.1| PREDICTED: T-complex protein 1 subunit theta...    51   9e-06
gb|KEH40543.1| TCP-1/cpn60 chaperonin family protein [Medicago t...    51   9e-06
ref|XP_002525435.1| chaperonin containing t-complex protein 1, t...    51   9e-06

>ref|XP_004498325.1| PREDICTED: T-complex protein 1 subunit theta-like [Cicer arietinum]
          Length = 546

 Score = 51.2 bits (121), Expect(2) = 9e-06
 Identities = 21/25 (84%), Positives = 25/25 (100%)
 Frame = -1

Query: 207 LKLSRPNPDDLGYIDSISVEEIGGM 133
           LKLSRPNPDDLGY+DS+SVEE+GG+
Sbjct: 337 LKLSRPNPDDLGYVDSVSVEEVGGV 361



 Score = 24.6 bits (52), Expect(2) = 9e-06
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = -2

Query: 35  VTVVKNEQGGN 3
           VT+VKNE+GGN
Sbjct: 363 VTIVKNEEGGN 373


>gb|KEH40543.1| TCP-1/cpn60 chaperonin family protein [Medicago truncatula]
          Length = 543

 Score = 51.2 bits (121), Expect(2) = 9e-06
 Identities = 22/24 (91%), Positives = 24/24 (100%)
 Frame = -1

Query: 207 LKLSRPNPDDLGYIDSISVEEIGG 136
           LKLSRPNPDDLGY+DS+SVEEIGG
Sbjct: 334 LKLSRPNPDDLGYVDSVSVEEIGG 357



 Score = 24.6 bits (52), Expect(2) = 9e-06
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = -2

Query: 35  VTVVKNEQGGN 3
           VT+VKNE+GGN
Sbjct: 360 VTIVKNEEGGN 370


>ref|XP_002525435.1| chaperonin containing t-complex protein 1, theta subunit, tcpq,
           putative [Ricinus communis] gi|223535248|gb|EEF36925.1|
           chaperonin containing t-complex protein 1, theta
           subunit, tcpq, putative [Ricinus communis]
          Length = 517

 Score = 50.8 bits (120), Expect(2) = 9e-06
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = -1

Query: 207 LKLSRPNPDDLGYIDSISVEEIGGM 133
           LKLS+PNPDDLGYIDSISVEEIGG+
Sbjct: 336 LKLSQPNPDDLGYIDSISVEEIGGV 360



 Score = 25.0 bits (53), Expect(2) = 9e-06
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = -2

Query: 35  VTVVKNEQGGN 3
           VTVVKNE+GGN
Sbjct: 362 VTVVKNEEGGN 372


Top