BLASTX nr result
ID: Forsythia23_contig00022434
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00022434
(518 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein... 182 6e-44
ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein... 169 5e-40
ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe... 167 2e-39
gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythra... 167 2e-39
ref|XP_010057458.1| PREDICTED: RNA polymerase-associated protein... 166 6e-39
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta... 165 9e-39
ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein... 163 5e-38
ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein... 162 6e-38
ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 160 3e-37
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein... 160 3e-37
ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ... 160 4e-37
ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein... 159 7e-37
ref|XP_008453742.1| PREDICTED: RNA polymerase-associated protein... 159 9e-37
ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein... 158 2e-36
ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prun... 158 2e-36
ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein... 157 3e-36
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein... 157 3e-36
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein... 157 3e-36
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 156 4e-36
ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein... 156 6e-36
>ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Sesamum
indicum]
Length = 627
Score = 182 bits (463), Expect = 6e-44
Identities = 98/141 (69%), Positives = 105/141 (74%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXXXXK 180
TRSRNYY++NS G EAA ETNGDASA L +N GG K
Sbjct: 489 TRSRNYYVANSNGGEAAGETNGDASAALPGSN--GGGRVSAEAGVAATAAALEAAAGAGK 546
Query: 181 LVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPEN 360
LVDT APVDQGTESN+LHNFELPISLA LQKFGG QG+QAGFMARKQR+EAT+G VPEN
Sbjct: 547 LVDTSAPVDQGTESNMLHNFELPISLAALQKFGGPQGAQAGFMARKQRIEATLGVKVPEN 606
Query: 361 DGRRHALTLTVSDYKRRRGLL 423
DGRRHALTLTVSDYKRRRGLL
Sbjct: 607 DGRRHALTLTVSDYKRRRGLL 627
>ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Vitis
vinifera]
Length = 658
Score = 169 bits (429), Expect = 5e-40
Identities = 93/142 (65%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Frame = +1
Query: 1 TRSRNYYLSN-SGGDEAAVETNGDASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXXXX 177
TRSRNYY+S GGDEAA NG+A A A NG
Sbjct: 517 TRSRNYYVSKPGGGDEAAAVANGEAPAAFVGAGSNGTGGKGAEVGVAATAAALEAAADAG 576
Query: 178 KLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPE 357
KLVDT APVDQGTESN LH+FELPISLA LQKFGG QG+ AGFMARKQR+EATVGC VPE
Sbjct: 577 KLVDTSAPVDQGTESNTLHDFELPISLAGLQKFGGPQGALAGFMARKQRIEATVGCRVPE 636
Query: 358 NDGRRHALTLTVSDYKRRRGLL 423
NDGRRHALTLTV DYKRRRGLL
Sbjct: 637 NDGRRHALTLTVGDYKRRRGLL 658
>ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe guttatus]
Length = 623
Score = 167 bits (424), Expect = 2e-39
Identities = 94/144 (65%), Positives = 99/144 (68%), Gaps = 3/144 (2%)
Frame = +1
Query: 1 TRSRNYYLSNSGGD---EAAVETNGDASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXX 171
TRSRNYY+ NSGG E AVETNG A L
Sbjct: 494 TRSRNYYVGNSGGGVEAEVAVETNGGGGAALP--------------GLAATEAALVAAAG 539
Query: 172 XXKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTV 351
KLVDT APVDQGTESNLLHNFELPISLAVLQKFGG QG+QAGFMARKQR+EAT+G V
Sbjct: 540 AGKLVDTMAPVDQGTESNLLHNFELPISLAVLQKFGGPQGTQAGFMARKQRIEATLGVKV 599
Query: 352 PENDGRRHALTLTVSDYKRRRGLL 423
PENDGRRHALTL+VSDYKRRRGLL
Sbjct: 600 PENDGRRHALTLSVSDYKRRRGLL 623
>gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythranthe guttata]
Length = 606
Score = 167 bits (424), Expect = 2e-39
Identities = 94/144 (65%), Positives = 99/144 (68%), Gaps = 3/144 (2%)
Frame = +1
Query: 1 TRSRNYYLSNSGGD---EAAVETNGDASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXX 171
TRSRNYY+ NSGG E AVETNG A L
Sbjct: 477 TRSRNYYVGNSGGGVEAEVAVETNGGGGAALP--------------GLAATEAALVAAAG 522
Query: 172 XXKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTV 351
KLVDT APVDQGTESNLLHNFELPISLAVLQKFGG QG+QAGFMARKQR+EAT+G V
Sbjct: 523 AGKLVDTMAPVDQGTESNLLHNFELPISLAVLQKFGGPQGTQAGFMARKQRIEATLGVKV 582
Query: 352 PENDGRRHALTLTVSDYKRRRGLL 423
PENDGRRHALTL+VSDYKRRRGLL
Sbjct: 583 PENDGRRHALTLSVSDYKRRRGLL 606
>ref|XP_010057458.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Eucalyptus grandis] gi|629109481|gb|KCW74627.1|
hypothetical protein EUGRSUZ_E03353 [Eucalyptus grandis]
Length = 653
Score = 166 bits (420), Expect = 6e-39
Identities = 88/141 (62%), Positives = 95/141 (67%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXXXXK 180
TRSRNYY+S G A N + + VA NG V K
Sbjct: 513 TRSRNYYVSKPNGGSEAGGANDNVNVASMVAESNGSVPVVSESGVVATVEALEAAADAGK 572
Query: 181 LVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPEN 360
LVDT APVDQGTESNLLHNFELPISL VL+KFGGAQG+ GFM+RKQR+EATVGC VPEN
Sbjct: 573 LVDTNAPVDQGTESNLLHNFELPISLNVLRKFGGAQGALTGFMSRKQRIEATVGCRVPEN 632
Query: 361 DGRRHALTLTVSDYKRRRGLL 423
DGRRH LTLTVSDYKRRRGLL
Sbjct: 633 DGRRHILTLTVSDYKRRRGLL 653
>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
gi|223541691|gb|EEF43239.1| RNA polymerase-associated
protein RTF1, putative [Ricinus communis]
Length = 660
Score = 165 bits (418), Expect = 9e-39
Identities = 88/142 (61%), Positives = 96/142 (67%), Gaps = 1/142 (0%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLEVAN-INGGVEXXXXXXXXXXXXXXXXXXXXX 177
TRSRNYY+S G +AA TN +AS + VAN
Sbjct: 519 TRSRNYYVSKPAGGDAAAATNNEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAG 578
Query: 178 KLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPE 357
KLVDT APVDQGTESN LHNFELPISL LQKFGGAQG+QAGFMARKQR+EAT+GC V E
Sbjct: 579 KLVDTAAPVDQGTESNTLHNFELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSE 638
Query: 358 NDGRRHALTLTVSDYKRRRGLL 423
ND +RH LTLTVSDYKRRRGLL
Sbjct: 639 NDEKRHVLTLTVSDYKRRRGLL 660
>ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Gossypium raimondii] gi|763802543|gb|KJB69481.1|
hypothetical protein B456_011G025800 [Gossypium
raimondii] gi|763802544|gb|KJB69482.1| hypothetical
protein B456_011G025800 [Gossypium raimondii]
gi|763802545|gb|KJB69483.1| hypothetical protein
B456_011G025800 [Gossypium raimondii]
Length = 660
Score = 163 bits (412), Expect = 5e-38
Identities = 85/141 (60%), Positives = 97/141 (68%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXXXXK 180
TRSRNYY + + G +AA NGD + + N N K
Sbjct: 520 TRSRNYYNAKAPGGDAAAVANGDTNGAIGSGNGNDAGAAAAEAGRAATAAALQEAAGAGK 579
Query: 181 LVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPEN 360
LVDT APVD+GTESN+LH+FELPISL VL+KFGG +G+ AGFMARKQR+EATVGC VPEN
Sbjct: 580 LVDTNAPVDEGTESNMLHDFELPISLDVLRKFGGHEGAVAGFMARKQRIEATVGCRVPEN 639
Query: 361 DGRRHALTLTVSDYKRRRGLL 423
DGRRHALTLTVSDYKRRRGLL
Sbjct: 640 DGRRHALTLTVSDYKRRRGLL 660
>ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha
curcas] gi|643703874|gb|KDP20938.1| hypothetical protein
JCGZ_21409 [Jatropha curcas]
Length = 658
Score = 162 bits (411), Expect = 6e-38
Identities = 87/142 (61%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXXXX- 177
TRSRNYY+S GG + A E N + +A VA+ NG
Sbjct: 519 TRSRNYYVSKPGGADVAAEANNNGTAA--VAHSNGAATGTLAEAGMAATAAALEAAADAG 576
Query: 178 KLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPE 357
KLVDT APVDQGTESN LH+F+LPISL L+KFGGA+G++AGFMARKQ++EATVGC VPE
Sbjct: 577 KLVDTAAPVDQGTESNTLHDFDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPE 636
Query: 358 NDGRRHALTLTVSDYKRRRGLL 423
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 637 NDGRRHALTLTVSDYKRRRGLL 658
>ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
RTF1 homolog [Prunus mume]
Length = 648
Score = 160 bits (405), Expect = 3e-37
Identities = 87/142 (61%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLEVANING-GVEXXXXXXXXXXXXXXXXXXXXX 177
TRSRNYY+S G + E DA L NG V
Sbjct: 507 TRSRNYYVSKPGEQKGEAEAIVDADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAG 566
Query: 178 KLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPE 357
KL+DT APVD GTESNL+HNFELPISLA LQKFGG QG+Q GF+ARKQR+EATVGC VPE
Sbjct: 567 KLIDTSAPVDFGTESNLMHNFELPISLATLQKFGGPQGAQEGFLARKQRIEATVGCRVPE 626
Query: 358 NDGRRHALTLTVSDYKRRRGLL 423
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 627 NDGRRHALTLTVSDYKRRRGLL 648
>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
tuberosum]
Length = 652
Score = 160 bits (405), Expect = 3e-37
Identities = 87/142 (61%), Positives = 99/142 (69%), Gaps = 1/142 (0%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGD-ASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXXXX 177
TRS NY+ + +EA +NG+ A+A A N G
Sbjct: 512 TRSTNYF-AKGANEEAEGASNGEVAAAAALAAEDNNGASGTADGGMAATAAALQAAAGAG 570
Query: 178 KLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPE 357
KLVDT APVDQGTESN LH+F+LPISLAVLQKFGG+QG QAGFMARKQR+EATVGC+VPE
Sbjct: 571 KLVDTNAPVDQGTESNTLHDFDLPISLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPE 630
Query: 358 NDGRRHALTLTVSDYKRRRGLL 423
NDGRRHALTL+VSDYKRRRGLL
Sbjct: 631 NDGRRHALTLSVSDYKRRRGLL 652
>ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao]
gi|590624750|ref|XP_007025692.1| PAF1 complex component
isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1|
PAF1 complex component isoform 1 [Theobroma cacao]
gi|508781058|gb|EOY28314.1| PAF1 complex component
isoform 1 [Theobroma cacao]
Length = 660
Score = 160 bits (404), Expect = 4e-37
Identities = 85/141 (60%), Positives = 96/141 (68%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXXXXK 180
TRSRNYY++ G +AA NGD V+ N N K
Sbjct: 521 TRSRNYYVAKPPGADAAAVANGDRIGVIASGNGNDA-RAAAEAGRAATVAALQEAAGAGK 579
Query: 181 LVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPEN 360
LVDT APVD+GTESN+LH+FE+PISL LQ+FGG QG+ AGFMARKQR+EATVGC VPEN
Sbjct: 580 LVDTSAPVDEGTESNMLHDFEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPEN 639
Query: 361 DGRRHALTLTVSDYKRRRGLL 423
DGRRHALTLTVSDYKRRRGLL
Sbjct: 640 DGRRHALTLTVSDYKRRRGLL 660
>ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Nicotiana tomentosiformis]
Length = 654
Score = 159 bits (402), Expect = 7e-37
Identities = 88/141 (62%), Positives = 99/141 (70%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXXXXK 180
TRS NY+ + S + A +NG+A+A L V + N G K
Sbjct: 516 TRSTNYF-AKSANEAAEGASNGEAAAALAVVD-NNGAGGIADGGMEATAAALQAAAGAGK 573
Query: 181 LVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPEN 360
LVDT APVD GTESN LH+F+LPISLAVLQKFGG QGSQAGFMARKQR+EATVGC VPEN
Sbjct: 574 LVDTIAPVDLGTESNTLHDFDLPISLAVLQKFGGPQGSQAGFMARKQRIEATVGCRVPEN 633
Query: 361 DGRRHALTLTVSDYKRRRGLL 423
DGRRHALTL+VSDYKRRRGLL
Sbjct: 634 DGRRHALTLSVSDYKRRRGLL 654
>ref|XP_008453742.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
melo] gi|659107574|ref|XP_008453743.1| PREDICTED: RNA
polymerase-associated protein RTF1 homolog [Cucumis
melo]
Length = 660
Score = 159 bits (401), Expect = 9e-37
Identities = 87/142 (61%), Positives = 97/142 (68%), Gaps = 1/142 (0%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLE-VANINGGVEXXXXXXXXXXXXXXXXXXXXX 177
TRSRNYY+SN+G A E G++ V + + G
Sbjct: 519 TRSRNYYVSNAGEANGAAEAAGNSDTVTPALESTRTGAGGTSDAGMAATAAALEAAAGAG 578
Query: 178 KLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPE 357
KLVDT APVD GTESN LHNFELPISLA+LQKFGGA G+QAGF+ARKQR+EATVG VPE
Sbjct: 579 KLVDTNAPVDGGTESNSLHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPE 638
Query: 358 NDGRRHALTLTVSDYKRRRGLL 423
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 639 NDGRRHALTLTVSDYKRRRGLL 660
>ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Nicotiana sylvestris]
Length = 654
Score = 158 bits (399), Expect = 2e-36
Identities = 87/141 (61%), Positives = 99/141 (70%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXXXXK 180
TRS NY+ + S + A +NG+A+A L V + N G K
Sbjct: 516 TRSTNYF-AKSANEAAVGASNGEAAAALAVVD-NNGAGGIADGGMAATAAALQAAAGAGK 573
Query: 181 LVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPEN 360
LVDT APVD GTESN LH+F+LPISLAVLQKFGG QGSQAGF+ARKQR+EATVGC VPEN
Sbjct: 574 LVDTIAPVDLGTESNTLHDFDLPISLAVLQKFGGPQGSQAGFIARKQRIEATVGCRVPEN 633
Query: 361 DGRRHALTLTVSDYKRRRGLL 423
DGRRHALTL+VSDYKRRRGLL
Sbjct: 634 DGRRHALTLSVSDYKRRRGLL 654
>ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
gi|462413781|gb|EMJ18830.1| hypothetical protein
PRUPE_ppa002666mg [Prunus persica]
Length = 646
Score = 158 bits (399), Expect = 2e-36
Identities = 86/142 (60%), Positives = 93/142 (65%), Gaps = 1/142 (0%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLEVANING-GVEXXXXXXXXXXXXXXXXXXXXX 177
TRSRNYY+S G + E DA L NG V
Sbjct: 505 TRSRNYYVSKPGEQKGEAEAIVDADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAG 564
Query: 178 KLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPE 357
KL+DT APVD GTESNL+HNFELPISLA LQKFGG QG+Q GF+ARKQR+EATVGC VPE
Sbjct: 565 KLIDTSAPVDFGTESNLMHNFELPISLATLQKFGGPQGAQEGFLARKQRIEATVGCRVPE 624
Query: 358 NDGRRHALTLTVSDYKRRRGLL 423
NDGRRHALTLTVSDYKRR GLL
Sbjct: 625 NDGRRHALTLTVSDYKRRMGLL 646
>ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nelumbo
nucifera]
Length = 666
Score = 157 bits (396), Expect = 3e-36
Identities = 86/143 (60%), Positives = 97/143 (67%), Gaps = 2/143 (1%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDAS--AVLEVANINGGVEXXXXXXXXXXXXXXXXXXXX 174
TRSRNYY+S G E A NG+A+ + + VA+ G
Sbjct: 526 TRSRNYYVSKPG--EGAPTANGEAAVASAVSVASSGTGARAAAEAGIAATAAALEAAAGA 583
Query: 175 XKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVP 354
KLVDT APVDQGTESN LH+FELPISLA LQKFGG QG+ GF+ RKQR+EATVGC VP
Sbjct: 584 GKLVDTSAPVDQGTESNSLHDFELPISLAGLQKFGGPQGAHLGFLGRKQRIEATVGCRVP 643
Query: 355 ENDGRRHALTLTVSDYKRRRGLL 423
ENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 644 ENDGRRHSLTLTVSDYKRRRGLL 666
>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
lycopersicum]
Length = 645
Score = 157 bits (396), Expect = 3e-36
Identities = 87/141 (61%), Positives = 96/141 (68%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLEVANINGGVEXXXXXXXXXXXXXXXXXXXXXK 180
TRS NY+ + EAA A+A L A N G K
Sbjct: 512 TRSTNYFAKGASNGEAA------AAAAL-AAEDNNGAGGTADGGMAATAAALQAAAGAGK 564
Query: 181 LVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPEN 360
LVDT APVDQGTESN LH+F+LPISLAVLQKFGG+QG QAGFMARKQR+EATVGC+VPEN
Sbjct: 565 LVDTNAPVDQGTESNTLHDFDLPISLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPEN 624
Query: 361 DGRRHALTLTVSDYKRRRGLL 423
DGRRHALTL+VSDYKRRRGLL
Sbjct: 625 DGRRHALTLSVSDYKRRRGLL 645
>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
sativus] gi|778690563|ref|XP_011653135.1| PREDICTED: RNA
polymerase-associated protein RTF1 homolog [Cucumis
sativus] gi|700198089|gb|KGN53247.1| hypothetical
protein Csa_4G038650 [Cucumis sativus]
Length = 660
Score = 157 bits (396), Expect = 3e-36
Identities = 87/142 (61%), Positives = 96/142 (67%), Gaps = 1/142 (0%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLE-VANINGGVEXXXXXXXXXXXXXXXXXXXXX 177
TRSRNYY+SN+G A E G++ V + N
Sbjct: 519 TRSRNYYVSNAGEANGAAEAAGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAG 578
Query: 178 KLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPE 357
KLVDT APVD GTESN LHNFELPISLA+LQKFGGA G+QAGF+ARKQR+EATVG VPE
Sbjct: 579 KLVDTNAPVDGGTESNSLHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPE 638
Query: 358 NDGRRHALTLTVSDYKRRRGLL 423
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 639 NDGRRHALTLTVSDYKRRRGLL 660
>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Glycine max] gi|571466984|ref|XP_006583809.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Glycine max]
Length = 656
Score = 156 bits (395), Expect = 4e-36
Identities = 88/142 (61%), Positives = 96/142 (67%), Gaps = 1/142 (0%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLEVANING-GVEXXXXXXXXXXXXXXXXXXXXX 177
TRSRNYY + G E A N + + A NG G
Sbjct: 517 TRSRNYYAAKPG--EKAAAGNNSVNGNVAGAGSNGTGAPVTAEAGMVATAAALEAAAGAG 574
Query: 178 KLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPE 357
KLVDT APVDQGTESN+LHNFELPISLA+LQKFGGAQG+QAGFMARKQ++EATVG V E
Sbjct: 575 KLVDTSAPVDQGTESNMLHNFELPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSE 634
Query: 358 NDGRRHALTLTVSDYKRRRGLL 423
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 635 NDGRRHALTLTVSDYKRRRGLL 656
>ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pyrus x
bretschneideri]
Length = 657
Score = 156 bits (394), Expect = 6e-36
Identities = 86/142 (60%), Positives = 92/142 (64%), Gaps = 1/142 (0%)
Frame = +1
Query: 1 TRSRNYYLSNSGGDEAAVETNGDASAVLEVANING-GVEXXXXXXXXXXXXXXXXXXXXX 177
TRSRNYY+S G + E A L NG V
Sbjct: 516 TRSRNYYVSKPGEQKEEAEAIAVADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAG 575
Query: 178 KLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPE 357
KL+DT APVD GTESNL HNFELPISLA LQKFGG QG+Q GF+ARKQR+EATVGC VPE
Sbjct: 576 KLIDTSAPVDFGTESNLKHNFELPISLAALQKFGGPQGAQKGFLARKQRIEATVGCQVPE 635
Query: 358 NDGRRHALTLTVSDYKRRRGLL 423
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 636 NDGRRHALTLTVSDYKRRRGLL 657