BLASTX nr result
ID: Forsythia23_contig00021668
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00021668
(327 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein... 179 5e-43
ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein... 166 4e-39
ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein... 166 4e-39
emb|CDO99584.1| unnamed protein product [Coffea canephora] 163 5e-38
ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe... 160 2e-37
gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythra... 160 2e-37
ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein... 160 3e-37
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein... 160 4e-37
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein... 159 9e-37
gb|KHN13191.1| RNA polymerase-associated protein RTF1 like [Glyc... 158 1e-36
gb|KHN10031.1| RNA polymerase-associated protein RTF1 like [Glyc... 158 1e-36
gb|KHN07280.1| RNA polymerase-associated protein RTF1 like [Glyc... 158 1e-36
ref|XP_008453742.1| PREDICTED: RNA polymerase-associated protein... 158 1e-36
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein... 158 1e-36
gb|KDO47969.1| hypothetical protein CISIN_1g006477mg [Citrus sin... 158 2e-36
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein... 158 2e-36
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr... 158 2e-36
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta... 157 2e-36
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein... 157 2e-36
ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas... 157 3e-36
>ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Sesamum
indicum]
Length = 627
Score = 179 bits (455), Expect = 5e-43
Identities = 84/91 (92%), Positives = 90/91 (98%)
Frame = -3
Query: 274 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 95
MADSDD+KTSESK PT+EDI+EITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI
Sbjct: 227 MADSDDDKTSESKVPTYEDIREITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 286
Query: 94 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
YRLC+VRNVDAT+PD+QYKLDNKTTYKYLNV
Sbjct: 287 YRLCVVRNVDATDPDKQYKLDNKTTYKYLNV 317
>ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Nicotiana sylvestris]
Length = 654
Score = 166 bits (421), Expect = 4e-39
Identities = 77/91 (84%), Positives = 88/91 (96%)
Frame = -3
Query: 274 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 95
M DSDD+K+ ES+ PTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIG+SRSGPI
Sbjct: 254 MDDSDDDKSPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPI 313
Query: 94 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
YRLC+VRNVDAT+P+RQYKL+NKTT+K+LN+
Sbjct: 314 YRLCIVRNVDATDPNRQYKLENKTTFKFLNL 344
>ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Nicotiana tomentosiformis]
Length = 654
Score = 166 bits (421), Expect = 4e-39
Identities = 77/91 (84%), Positives = 88/91 (96%)
Frame = -3
Query: 274 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 95
M DSDD+K+ ES+ PTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIG+SRSGPI
Sbjct: 254 MDDSDDDKSPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPI 313
Query: 94 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
YRLC+VRNVDAT+P+RQYKL+NKTT+K+LN+
Sbjct: 314 YRLCIVRNVDATDPNRQYKLENKTTFKFLNL 344
>emb|CDO99584.1| unnamed protein product [Coffea canephora]
Length = 631
Score = 163 bits (412), Expect = 5e-38
Identities = 78/92 (84%), Positives = 87/92 (94%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 MADSDDEKTS-ESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 98
MADSD++KTS ESK PT+EDIKEITIRRSKLAKWFMEPFF++LIVGCFVRVGIGK+R GP
Sbjct: 234 MADSDEDKTSAESKWPTYEDIKEITIRRSKLAKWFMEPFFEDLIVGCFVRVGIGKNRYGP 293
Query: 97 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
IYRLC+VRNVD ++PDR YKLDNKTTYKYLNV
Sbjct: 294 IYRLCVVRNVDGSDPDRLYKLDNKTTYKYLNV 325
>ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe guttatus]
Length = 623
Score = 160 bits (406), Expect = 2e-37
Identities = 78/91 (85%), Positives = 85/91 (93%)
Frame = -3
Query: 274 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 95
+ DSDD+K S SK PTFEDIKEITIRRSKL+KWFMEPFFDELIVGCFVRVGIGKSRSG I
Sbjct: 233 LGDSDDDKVS-SKVPTFEDIKEITIRRSKLSKWFMEPFFDELIVGCFVRVGIGKSRSGSI 291
Query: 94 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
YRLC+VRNVDAT+PDR+YKLDNKTT K+LNV
Sbjct: 292 YRLCVVRNVDATDPDRKYKLDNKTTSKWLNV 322
>gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythranthe guttata]
Length = 606
Score = 160 bits (406), Expect = 2e-37
Identities = 78/91 (85%), Positives = 85/91 (93%)
Frame = -3
Query: 274 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 95
+ DSDD+K S SK PTFEDIKEITIRRSKL+KWFMEPFFDELIVGCFVRVGIGKSRSG I
Sbjct: 233 LGDSDDDKVS-SKVPTFEDIKEITIRRSKLSKWFMEPFFDELIVGCFVRVGIGKSRSGSI 291
Query: 94 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
YRLC+VRNVDAT+PDR+YKLDNKTT K+LNV
Sbjct: 292 YRLCVVRNVDATDPDRKYKLDNKTTSKWLNV 322
>ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Vitis
vinifera]
Length = 658
Score = 160 bits (405), Expect = 3e-37
Identities = 75/90 (83%), Positives = 82/90 (91%)
Frame = -3
Query: 274 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 95
M DSDD++ S PTFEDIK ITIRRSKLAKWFMEPFF+ELIVGCFVRVGIGKSRSGPI
Sbjct: 255 MVDSDDDRGIGSDVPTFEDIKSITIRRSKLAKWFMEPFFEELIVGCFVRVGIGKSRSGPI 314
Query: 94 YRLCMVRNVDATEPDRQYKLDNKTTYKYLN 5
YRLCMVRNVDA++PDR Y+L+NKTTYKYLN
Sbjct: 315 YRLCMVRNVDASDPDRHYQLENKTTYKYLN 344
>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
lycopersicum]
Length = 645
Score = 160 bits (404), Expect = 4e-37
Identities = 77/92 (83%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 MADSDDEKTS-ESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 98
M DSDD+K+S ES+ PTFEDIKEI+IRRSKLAKWFMEPFFDELIVGCFVRVGIG+SRSGP
Sbjct: 249 MDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGP 308
Query: 97 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
IYRLC+VRNVDA++P+RQYKL+NKTT K+LNV
Sbjct: 309 IYRLCVVRNVDASDPNRQYKLENKTTSKFLNV 340
>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
tuberosum]
Length = 652
Score = 159 bits (401), Expect = 9e-37
Identities = 76/92 (82%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 MADSDDEKTS-ESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 98
M DSDD+K+S ES+ PTFEDIKEI+IRRSKLAKWFMEPFFDELIVGCFVRVGIG+SRSGP
Sbjct: 249 MDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGP 308
Query: 97 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
IYRLC+VRNVD+++P+RQYKL+NKTT K+LNV
Sbjct: 309 IYRLCVVRNVDSSDPNRQYKLENKTTSKFLNV 340
>gb|KHN13191.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
Length = 646
Score = 158 bits (400), Expect = 1e-36
Identities = 74/92 (80%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 MADSDDEKT-SESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 98
+ADSDD++ + S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GP
Sbjct: 254 IADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGP 313
Query: 97 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
IYRLCMV+NVDA+EPDRQYKL+NKTTYKYLNV
Sbjct: 314 IYRLCMVKNVDASEPDRQYKLENKTTYKYLNV 345
>gb|KHN10031.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
Length = 646
Score = 158 bits (400), Expect = 1e-36
Identities = 74/92 (80%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 MADSDDEKT-SESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 98
+ADSDD++ + S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GP
Sbjct: 254 IADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGP 313
Query: 97 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
IYRLCMV+NVDA+EPDRQYKL+NKTTYKYLNV
Sbjct: 314 IYRLCMVKNVDASEPDRQYKLENKTTYKYLNV 345
>gb|KHN07280.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
Length = 646
Score = 158 bits (400), Expect = 1e-36
Identities = 74/92 (80%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 MADSDDEKT-SESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 98
+ADSDD++ + S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GP
Sbjct: 254 IADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGP 313
Query: 97 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
IYRLCMV+NVDA+EPDRQYKL+NKTTYKYLNV
Sbjct: 314 IYRLCMVKNVDASEPDRQYKLENKTTYKYLNV 345
>ref|XP_008453742.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
melo] gi|659107574|ref|XP_008453743.1| PREDICTED: RNA
polymerase-associated protein RTF1 homolog [Cucumis
melo]
Length = 660
Score = 158 bits (400), Expect = 1e-36
Identities = 77/92 (83%), Positives = 84/92 (91%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 MADSDDEKTSE-SKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 98
M DSDDE++ S PTFEDIKEITIRRSKLAKW MEPFF+ELIVGCFVRVGIG+SRSGP
Sbjct: 257 MIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSRSGP 316
Query: 97 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
IYRLC+VRNVDATEPDRQYKL+NK T+KYLNV
Sbjct: 317 IYRLCLVRNVDATEPDRQYKLENKITHKYLNV 348
>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 656
Score = 158 bits (400), Expect = 1e-36
Identities = 74/92 (80%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 MADSDDEKT-SESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 98
+ADSDD++ + S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GP
Sbjct: 254 IADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGP 313
Query: 97 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
IYRLCMV+NVDA+EPDRQYKL+NKTTYKYLNV
Sbjct: 314 IYRLCMVKNVDASEPDRQYKLENKTTYKYLNV 345
>gb|KDO47969.1| hypothetical protein CISIN_1g006477mg [Citrus sinensis]
gi|641828832|gb|KDO47970.1| hypothetical protein
CISIN_1g006477mg [Citrus sinensis]
Length = 643
Score = 158 bits (399), Expect = 2e-36
Identities = 74/91 (81%), Positives = 83/91 (91%)
Frame = -3
Query: 274 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 95
MADSDD+ S PT++DIKEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GPI
Sbjct: 244 MADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI 303
Query: 94 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
YRLCMVRNVDATEPDR YKL+N+TT KYLNV
Sbjct: 304 YRLCMVRNVDATEPDRSYKLENRTTCKYLNV 334
>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Citrus sinensis]
Length = 643
Score = 158 bits (399), Expect = 2e-36
Identities = 74/91 (81%), Positives = 83/91 (91%)
Frame = -3
Query: 274 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 95
MADSDD+ S PT++DIKEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GPI
Sbjct: 244 MADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI 303
Query: 94 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
YRLCMVRNVDATEPDR YKL+N+TT KYLNV
Sbjct: 304 YRLCMVRNVDATEPDRSYKLENRTTCKYLNV 334
>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
gi|557524836|gb|ESR36142.1| hypothetical protein
CICLE_v10028000mg [Citrus clementina]
Length = 643
Score = 158 bits (399), Expect = 2e-36
Identities = 74/91 (81%), Positives = 83/91 (91%)
Frame = -3
Query: 274 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 95
MADSDD+ S PT++DIKEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GPI
Sbjct: 244 MADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI 303
Query: 94 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
YRLCMVRNVDATEPDR YKL+N+TT KYLNV
Sbjct: 304 YRLCMVRNVDATEPDRSYKLENRTTCKYLNV 334
>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
gi|223541691|gb|EEF43239.1| RNA polymerase-associated
protein RTF1, putative [Ricinus communis]
Length = 660
Score = 157 bits (398), Expect = 2e-36
Identities = 73/91 (80%), Positives = 84/91 (92%)
Frame = -3
Query: 274 MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPI 95
MADSDD+ S+ PTF+DI+EITIRRSKLAKWFMEP+F+ELIVGCFVRVGIG+S+SGPI
Sbjct: 257 MADSDDDGEPGSQGPTFDDIREITIRRSKLAKWFMEPWFEELIVGCFVRVGIGRSKSGPI 316
Query: 94 YRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
YRLC+VRNVDA +PDR YKL+NKTTYKYLNV
Sbjct: 317 YRLCLVRNVDAADPDRPYKLENKTTYKYLNV 347
>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
sativus] gi|778690563|ref|XP_011653135.1| PREDICTED: RNA
polymerase-associated protein RTF1 homolog [Cucumis
sativus] gi|700198089|gb|KGN53247.1| hypothetical
protein Csa_4G038650 [Cucumis sativus]
Length = 660
Score = 157 bits (398), Expect = 2e-36
Identities = 76/92 (82%), Positives = 84/92 (91%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 MADSDDEKTSE-SKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 98
M DSDDE++ S PTFEDIKE+TIRRSKLAKW MEPFF+ELIVGCFVRVGIG+SRSGP
Sbjct: 257 MIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSRSGP 316
Query: 97 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
IYRLC+VRNVDATEPDRQYKL+NK T+KYLNV
Sbjct: 317 IYRLCLVRNVDATEPDRQYKLENKITHKYLNV 348
>ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
gi|561032714|gb|ESW31293.1| hypothetical protein
PHAVU_002G226300g [Phaseolus vulgaris]
Length = 654
Score = 157 bits (396), Expect = 3e-36
Identities = 73/92 (79%), Positives = 87/92 (94%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 MADSDDEKT-SESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGP 98
+ DSDD++ + S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELIVGCFVRVGIG+S++GP
Sbjct: 255 IGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGP 314
Query: 97 IYRLCMVRNVDATEPDRQYKLDNKTTYKYLNV 2
IYRLCMV+NVDA+EPDRQYKL+NKTTYKYLNV
Sbjct: 315 IYRLCMVKNVDASEPDRQYKLENKTTYKYLNV 346