BLASTX nr result

ID: Forsythia23_contig00020898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia23_contig00020898
         (560 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011084206.1| PREDICTED: DNA ligase 1-like [Sesamum indicu...    77   4e-12
emb|CDP11178.1| unnamed protein product [Coffea canephora]             68   3e-09

>ref|XP_011084206.1| PREDICTED: DNA ligase 1-like [Sesamum indicum]
           gi|747074433|ref|XP_011084208.1| PREDICTED: DNA ligase
           1-like [Sesamum indicum]
           gi|747074435|ref|XP_011084209.1| PREDICTED: DNA ligase
           1-like [Sesamum indicum]
           gi|747074437|ref|XP_011084210.1| PREDICTED: DNA ligase
           1-like [Sesamum indicum]
          Length = 542

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 60/168 (35%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
 Frame = -1

Query: 467 VAGKVEVRNGESLRPTVHTKATGSSSDEAKHATQLRVQNGGKPVQNNLISQELKESKCVL 288
           VA ++E ++G  L     +K   SS DE K +     QNGGKP+Q++L S   +ESK V 
Sbjct: 100 VARELEAKSGGKLHQKGQSKDRSSSLDEGKCSALFHGQNGGKPLQSSLPSHGNEESKFVQ 159

Query: 287 DPDSRI-INQKESVSQLLETVSGAYKRDQ-XXXXXXXXXXXXXLGEDNGQNKDNGVDRKT 114
           + D RI  ++K   SQL E V+   KRDQ              L E+ G N+   VD+K 
Sbjct: 160 ELDRRIRDDEKGRGSQLPERVAAVDKRDQEMAARAAVRNSSRVLAEEKGDNQIKRVDKKL 219

Query: 113 -----------NVQIWNLAETAKFKVGAMPRLVEEHCDQRLKGKEKSK 3
                      N+ + NL    + KVGA+PR V+E   +RL+ K+K K
Sbjct: 220 DPHVMRNEFSGNMMVQNLNPMGRNKVGAIPRPVDEQNGRRLEDKQKYK 267


>emb|CDP11178.1| unnamed protein product [Coffea canephora]
          Length = 490

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 10/141 (7%)
 Frame = -1

Query: 395 SSDEAKHATQLRVQNGGKPVQNNLISQELKESKCVLDPDSRI-INQKESVSQLLETVSGA 219
           S++E  H  Q    NGG+ V++NL++   +ES+ V   D  I + QK    +L+E  SG 
Sbjct: 98  SAEEKNHPAQFHGHNGGRSVESNLVASRAEESELVPQLDKSIRVEQKSIGDELVEKFSGL 157

Query: 218 YKRDQXXXXXXXXXXXXXLGEDNGQNKDNGVDRKT---------NVQIWNLAETAKFKVG 66
            K+               L E+ G++ D   D K          N  ++NL++T + KV 
Sbjct: 158 DKKRDDEAHRFAARNPGNLAEEKGKSSDKQFDNKKMEGQGTFSGNSVVYNLSKTTEGKVE 217

Query: 65  AMPRLVEEHCDQRLKGKEKSK 3
            +P++VE++ ++RL  KEK+K
Sbjct: 218 GIPKVVEKNDERRLGEKEKTK 238


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