BLASTX nr result
ID: Forsythia23_contig00020786
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia23_contig00020786
(856 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012836410.1| PREDICTED: DNA-directed RNA polymerase V sub... 269 2e-69
ref|XP_011088462.1| PREDICTED: DNA-directed RNA polymerase V sub... 255 3e-65
ref|XP_002269723.3| PREDICTED: DNA-directed RNA polymerase V sub... 230 1e-57
emb|CBI35146.3| unnamed protein product [Vitis vinifera] 230 1e-57
gb|KMT17079.1| hypothetical protein BVRB_2g041340 [Beta vulgaris... 229 2e-57
ref|XP_012068630.1| PREDICTED: DNA-directed RNA polymerase V sub... 226 1e-56
ref|XP_004307128.1| PREDICTED: DNA-directed RNA polymerase V sub... 220 1e-54
ref|XP_002513077.1| DNA-directed RNA polymerase II, putative [Ri... 219 2e-54
ref|XP_007011114.1| RNA polymerase II fifth largest subunit, put... 219 2e-54
ref|XP_007221129.1| hypothetical protein PRUPE_ppa018371mg, part... 218 4e-54
emb|CDP09516.1| unnamed protein product [Coffea canephora] 216 1e-53
ref|XP_011000541.1| PREDICTED: DNA-directed RNA polymerase V sub... 216 2e-53
ref|XP_010670506.1| PREDICTED: DNA-directed RNA polymerase V sub... 216 2e-53
ref|XP_009609962.1| PREDICTED: DNA-directed RNA polymerase V sub... 216 2e-53
ref|XP_002297750.2| eukaryotic rpb5 RNA polymerase subunit famil... 215 3e-53
ref|XP_010036349.1| PREDICTED: DNA-directed RNA polymerase V sub... 213 1e-52
ref|XP_010999617.1| PREDICTED: DNA-directed RNA polymerase V sub... 213 1e-52
ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citr... 213 2e-52
ref|XP_012085995.1| PREDICTED: DNA-directed RNA polymerase V sub... 212 2e-52
ref|XP_010090903.1| DNA-directed RNA polymerases I, II, and III ... 212 3e-52
>ref|XP_012836410.1| PREDICTED: DNA-directed RNA polymerase V subunit 5C [Erythranthe
guttatus] gi|604334081|gb|EYU38270.1| hypothetical
protein MIMGU_mgv1a013214mg [Erythranthe guttata]
Length = 227
Score = 269 bits (688), Expect = 2e-69
Identities = 137/213 (64%), Positives = 173/213 (81%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
CIASMVD GSVES+R YMAR T+VEML DRGY+V + E EL R+L +FR++FG+KP+ ++
Sbjct: 16 CIASMVDSGSVESRRYYMARGTLVEMLRDRGYVVPDVEAELRRSLPEFRSIFGDKPDPER 75
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LRL+A R S PSRKIL +F E +EIRK+NMV +LSQIMNKE LD+VIL+LQ+KMNS+A+K
Sbjct: 76 LRLVACRVSAPSRKILAIFCETVEIRKKNMVGILSQIMNKEQLDRVILVLQSKMNSHAQK 135
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
V DE+ +KVE FQI+ LLVNIT H PK ILT EK +LLKKY++++KQLP M ENDA
Sbjct: 136 VLDEYPIKVETFQITGLLVNITTHFLGPKFMILTPMEKEKLLKKYSIKDKQLPKMSENDA 195
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I+RYYGL KGQ+V V Y GG + D++VTYRC+
Sbjct: 196 IARYYGLEKGQVVMVIYSGG--LTDSLVTYRCI 226
>ref|XP_011088462.1| PREDICTED: DNA-directed RNA polymerase V subunit 5C [Sesamum
indicum]
Length = 220
Score = 255 bits (651), Expect = 3e-65
Identities = 137/213 (64%), Positives = 166/213 (77%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
CI SMVD GSVES+R Y+ARRT++EML DRGY+VAN EVEL R L+DFR VFG+KPE +
Sbjct: 17 CILSMVDNGSVESRRYYLARRTLMEMLRDRGYVVANVEVELCRCLADFREVFGDKPEAGR 76
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR+IA RAS+PSRKIL +F E EIRKRN+V +LSQI+NKE LD+VILILQ+KMN +A+K
Sbjct: 77 LRVIACRASDPSRKILAIFCETFEIRKRNIVGILSQIVNKETLDRVILILQSKMNFHAQK 136
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
V DE+ VKVE F I+D LVNITKH KHEILT E+K +LLKK+ +E+KQLP MLENDA
Sbjct: 137 VLDEYPVKVETFPITDFLVNITKHFLATKHEILTPEDKEKLLKKHNIEDKQLPRMLENDA 196
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
GQ+VKV+Y G + +VTYRCV
Sbjct: 197 --------GGQVVKVTYSSG--VTGLIVTYRCV 219
>ref|XP_002269723.3| PREDICTED: DNA-directed RNA polymerase V subunit 5C isoform X1
[Vitis vinifera]
Length = 333
Score = 230 bits (586), Expect = 1e-57
Identities = 117/213 (54%), Positives = 167/213 (78%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
CI + ++ GS+ES R Y++RRT+ +ML DRGY V ++E L+R+LSDFRA FG P+ +
Sbjct: 125 CITADMEQGSIESYRYYLSRRTLFQMLSDRGYNVPHSE--LTRSLSDFRASFGHNPDPSR 182
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR+ S+PS+KILV+F EIRK ++ ++ Q +N+E L ++IL+LQ+KMNS+ARK
Sbjct: 183 LRICLPLISSPSKKILVVFCGTDEIRKA-VIRVIFQQINREGLHRLILVLQSKMNSHARK 241
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
V DE+ +KVE FQI++LL+NITKHV +PKHEIL+A+EK +L+ KY +E+KQ PIM ++DA
Sbjct: 242 VVDEYPIKVEFFQITELLINITKHVSVPKHEILSAQEKRKLVNKYKLEDKQFPIMQKDDA 301
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I+RYYGL KGQ+VK++Y GG + D++VTYRCV
Sbjct: 302 IARYYGLEKGQVVKITYKGG--MTDSLVTYRCV 332
>emb|CBI35146.3| unnamed protein product [Vitis vinifera]
Length = 731
Score = 230 bits (586), Expect = 1e-57
Identities = 117/213 (54%), Positives = 167/213 (78%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
CI + ++ GS+ES R Y++RRT+ +ML DRGY V ++E L+R+LSDFRA FG P+ +
Sbjct: 523 CITADMEQGSIESYRYYLSRRTLFQMLSDRGYNVPHSE--LTRSLSDFRASFGHNPDPSR 580
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR+ S+PS+KILV+F EIRK ++ ++ Q +N+E L ++IL+LQ+KMNS+ARK
Sbjct: 581 LRICLPLISSPSKKILVVFCGTDEIRKA-VIRVIFQQINREGLHRLILVLQSKMNSHARK 639
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
V DE+ +KVE FQI++LL+NITKHV +PKHEIL+A+EK +L+ KY +E+KQ PIM ++DA
Sbjct: 640 VVDEYPIKVEFFQITELLINITKHVSVPKHEILSAQEKRKLVNKYKLEDKQFPIMQKDDA 699
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I+RYYGL KGQ+VK++Y GG + D++VTYRCV
Sbjct: 700 IARYYGLEKGQVVKITYKGG--MTDSLVTYRCV 730
>gb|KMT17079.1| hypothetical protein BVRB_2g041340 [Beta vulgaris subsp. vulgaris]
Length = 221
Score = 229 bits (583), Expect = 2e-57
Identities = 116/213 (54%), Positives = 155/213 (72%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
CI VD GSVES R Y+AR+T+ ++L DRGY+V++ E +R+LS+FRA FG P+
Sbjct: 10 CITHFVDNGSVESHRYYLARKTIFQLLNDRGYVVSSTE--FTRSLSEFRAEFGHNPDPLS 67
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR+ N S KILV+F EIRK N++ + +QI NKE LD++IL+LQNKMN +ARK
Sbjct: 68 LRICVPHRVNSSSKILVIFGGTEEIRKANILSIFNQITNKESLDRIILVLQNKMNHHARK 127
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
V DE +K+EIFQI++L+VNITKH PK+E LT +EK +LL+KY V + Q+P M ENDA
Sbjct: 128 VVDEFQIKIEIFQITELMVNITKHYLSPKYEKLTVQEKERLLQKYQVNDLQMPHMKENDA 187
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I+RYYG KGQ++KVSY G + +MVTYRC+
Sbjct: 188 IARYYGFEKGQVLKVSYTNLGGLAGSMVTYRCI 220
>ref|XP_012068630.1| PREDICTED: DNA-directed RNA polymerase V subunit 5C [Jatropha
curcas] gi|643733671|gb|KDP40514.1| hypothetical protein
JCGZ_24513 [Jatropha curcas]
Length = 227
Score = 226 bits (576), Expect = 1e-56
Identities = 117/213 (54%), Positives = 162/213 (76%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
CI VD+GS+ES R Y++RRTV+EML DRGY VA++E L+ +L+ FRA FG+KPE+ +
Sbjct: 18 CITQFVDHGSIESHRYYLSRRTVLEMLRDRGYDVADSE--LAGSLTQFRAEFGDKPELQR 75
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR+ +NP +K+LV+F +I+K + +L+QI+N+E L+ ++LILQ+KMN +ARK
Sbjct: 76 LRISVSLRTNPYKKMLVIFMGTEDIKKATIRCVLAQIVNRESLNGLMLILQSKMNHHARK 135
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
+ KVEIFQI+DLL+NITKHV +P+HEILT ++K QLL KY E+KQLP MLE DA
Sbjct: 136 EMAKFPSKVEIFQITDLLMNITKHVIVPRHEILTIQQKEQLLNKYKAEDKQLPRMLETDA 195
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I+RYY L KGQ+VK++Y GG + D++ TYRCV
Sbjct: 196 IARYYRLEKGQVVKITYSGG--LVDSLDTYRCV 226
>ref|XP_004307128.1| PREDICTED: DNA-directed RNA polymerase V subunit 5C [Fragaria vesca
subsp. vesca]
Length = 228
Score = 220 bits (560), Expect = 1e-54
Identities = 113/214 (52%), Positives = 158/214 (73%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
C+ S V GS+ES R YM+RRTV+EML DRGY V ++E L+R+L++F FG+ P++D+
Sbjct: 20 CMTSHVVQGSLESYRYYMSRRTVMEMLSDRGYNVPDSE--LTRSLTEFHTAFGQNPDLDR 77
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
+ SNP +KI+VLF EIRK N + +++MNK+ + ++L+LQ+K+NS+ARK
Sbjct: 78 VSFSVSLRSNPKKKIMVLFCGTDEIRKANAREIYAKLMNKD-ISSLMLVLQSKINSFARK 136
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
+ + KVE F IS+LLVN+TKHV PK+EILTAEEK LL+KY +E+K+LP+MLE DA
Sbjct: 137 ELETYPYKVETFHISELLVNVTKHVLHPKYEILTAEEKKNLLRKYKLEDKKLPLMLETDA 196
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCVG 212
+RYYGL KGQ+VK++Y GG V A+ TYRC+G
Sbjct: 197 FARYYGLEKGQVVKITYRGGAV--GALKTYRCIG 228
>ref|XP_002513077.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223548088|gb|EEF49580.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 239
Score = 219 bits (558), Expect = 2e-54
Identities = 115/213 (53%), Positives = 158/213 (74%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
C+ V+ S+ES+R Y++R+TV+EML DRGY VA++E L+ + ++F + FG+ P++ +
Sbjct: 30 CLTKFVEQASLESQRYYLSRKTVMEMLRDRGYDVADSE--LTGSFTEFLSEFGDNPDILK 87
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR+ A S+P +K++V+F EI+ N+ LL QI NKE L+ +ILILQ+KMN YARK
Sbjct: 88 LRISASLHSHPDKKMVVVFMGTEEIKLANIRGLLCQIKNKESLNGLILILQSKMNHYARK 147
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
+ KVEIF ISDLLVNITKHV P+HE+LTAE+K QLL K++ E+KQLP ML DA
Sbjct: 148 ELGQFPSKVEIFHISDLLVNITKHVLKPRHEVLTAEQKQQLLNKFSSEDKQLPRMLVTDA 207
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
ISRYYG KGQ+VK++Y GG + D++VTYRCV
Sbjct: 208 ISRYYGFEKGQVVKITYSGG--LVDSLVTYRCV 238
>ref|XP_007011114.1| RNA polymerase II fifth largest subunit, putative isoform 2
[Theobroma cacao] gi|508728027|gb|EOY19924.1| RNA
polymerase II fifth largest subunit, putative isoform 2
[Theobroma cacao]
Length = 235
Score = 219 bits (558), Expect = 2e-54
Identities = 121/214 (56%), Positives = 156/214 (72%)
Frame = -1
Query: 856 PCIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVD 677
PCI SMVD GSVES R Y+AR+TV EML DRGY VA++E L+ ++++FR+VFG++P+++
Sbjct: 26 PCIKSMVDQGSVESHRFYLARKTVWEMLKDRGYNVADSE--LTPSITEFRSVFGDQPDLE 83
Query: 676 QLRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYAR 497
LR+ SNPS+KILV+F +IRK + L QI+N E L +ILILQ+KMNS+A
Sbjct: 84 LLRISVSLRSNPSKKILVVFMGTNDIRKATVCALKGQILN-ESLSGLILILQSKMNSFAL 142
Query: 496 KVADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLEND 317
K KVE+F+I+DL VNITKH MPKHE+LTAEEK +LLKKY +E+KQLP ML+ D
Sbjct: 143 KELKNFPFKVELFKIADLYVNITKHFLMPKHEVLTAEEKQKLLKKYQLEDKQLPQMLQTD 202
Query: 316 AISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I+RYYGL KGQ+VKV+Y V YRCV
Sbjct: 203 PIARYYGLEKGQVVKVTYSEEFV--QFHEQYRCV 234
>ref|XP_007221129.1| hypothetical protein PRUPE_ppa018371mg, partial [Prunus persica]
gi|462417591|gb|EMJ22328.1| hypothetical protein
PRUPE_ppa018371mg, partial [Prunus persica]
Length = 214
Score = 218 bits (555), Expect = 4e-54
Identities = 115/213 (53%), Positives = 156/213 (73%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
CI S V GS+ES R Y++RRT +EML DRG V+++++ LS L++F + FG KP++ Q
Sbjct: 5 CITSHVVEGSMESYRFYLSRRTAMEMLSDRGCDVSDSDLSLS--LTEFHSQFGPKPDLQQ 62
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR+ SNPS+KI+V+F EIRK+ M + + + NKE + ++IL+LQ+KMNSYARK
Sbjct: 63 LRICVSLRSNPSKKIVVIFCGTEEIRKQTMCGIYAGLPNKENIHRLILVLQSKMNSYARK 122
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
+ + KVE F I DLLVNITKH PK EILTAEEK +LL+KY +E+KQLP+MLE D
Sbjct: 123 ELEMYPFKVETFHICDLLVNITKHALKPKLEILTAEEKNKLLRKYKLEDKQLPLMLETDG 182
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I+RYYGL KG++VKV+Y GG + ++ TYRCV
Sbjct: 183 IARYYGLEKGKVVKVTYSGG--VVGSLRTYRCV 213
>emb|CDP09516.1| unnamed protein product [Coffea canephora]
Length = 228
Score = 216 bits (551), Expect = 1e-53
Identities = 113/213 (53%), Positives = 156/213 (73%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
C++S +D GS+ES R Y++RRTV+EML DRG++V N+E+ LS L DFR +G++P++D+
Sbjct: 19 CLSSYIDEGSIESHRYYLSRRTVLEMLRDRGFLVPNSEIGLS--LQDFRNNYGQQPDIDR 76
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR+ A +PS KILVLF ++ + + +QIMNK+ L ++ILI+QN + S A K
Sbjct: 77 LRISALHKDDPSNKILVLFCGPNVVKVNVIRGIANQIMNKDTLSRLILIVQNHITSQAMK 136
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
D KVEIFQI+DLLVN+TKHV PKH++LT EEK +LL+KY +E+KQLP ML+ DA
Sbjct: 137 AVDLLPFKVEIFQITDLLVNVTKHVLKPKHQLLTEEEKQRLLEKYNIEDKQLPRMLQKDA 196
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I+RYYGL KGQ++KV+Y I + VTYRCV
Sbjct: 197 IARYYGLEKGQVLKVTY--NNEITETHVTYRCV 227
>ref|XP_011000541.1| PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Populus
euphratica]
Length = 233
Score = 216 bits (550), Expect = 2e-53
Identities = 114/213 (53%), Positives = 154/213 (72%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
C+ VD GS +S R Y++RRTV+EML DRGY V ++E L+R+L++FR+VFG P++D
Sbjct: 24 CLTDFVDEGSAQSYRYYISRRTVLEMLKDRGYDVLDSE--LNRSLTEFRSVFGNSPDLDS 81
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR SNP +K LV+F EI+ N+ + QI+N E + +ILILQ+KMN +A+K
Sbjct: 82 LRFSVSLRSNPHKKTLVMFLGTDEIKTANIRTVYGQILNNESVHGLILILQSKMNHFAKK 141
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
++ KVE+FQI+DLLVNITKHV P+ +ILTAE+K Q L KY +E+KQLP MLE+DA
Sbjct: 142 ELEKFPFKVEVFQITDLLVNITKHVLQPQMDILTAEQKQQALNKYKLEDKQLPRMLESDA 201
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I +YYGL KGQ+VK++Y G I D +VTYRCV
Sbjct: 202 IVQYYGLQKGQMVKITY--SGEIVDHLVTYRCV 232
>ref|XP_010670506.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A [Beta vulgaris
subsp. vulgaris]
Length = 243
Score = 216 bits (550), Expect = 2e-53
Identities = 116/235 (49%), Positives = 155/235 (65%), Gaps = 22/235 (9%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
CI VD GSVES R Y+AR+T+ ++L DRGY+V++ E +R+LS+FRA FG P+
Sbjct: 10 CITHFVDNGSVESHRYYLARKTIFQLLNDRGYVVSSTE--FTRSLSEFRAEFGHNPDPLS 67
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR+ N S KILV+F EIRK N++ + +QI NKE LD++IL+LQNKMN +ARK
Sbjct: 68 LRICVPHRVNSSSKILVIFGGTEEIRKANILSIFNQITNKESLDRIILVLQNKMNHHARK 127
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENK---------- 344
V DE +K+EIFQI++L+VNITKH PK+E LT +EK +LL+KY V +
Sbjct: 128 VVDEFQIKIEIFQITELMVNITKHYLSPKYEKLTVQEKERLLQKYQVNDLQAFQFHNLTG 187
Query: 343 ------------QLPIMLENDAISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
Q+P M ENDAI+RYYG KGQ++KVSY G + +MVTYRC+
Sbjct: 188 TGTYSGYVHVYIQMPHMKENDAIARYYGFEKGQVLKVSYTNLGGLAGSMVTYRCI 242
>ref|XP_009609962.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A isoform X1
[Nicotiana tomentosiformis]
Length = 228
Score = 216 bits (549), Expect = 2e-53
Identities = 115/214 (53%), Positives = 153/214 (71%)
Frame = -1
Query: 856 PCIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVD 677
PC+ S VD G+VES R ++ARRTV+EML DRG+ + N+E+E TL DFR FG++P++D
Sbjct: 18 PCLTSFVDDGTVESHRYFLARRTVLEMLKDRGFAIPNSEIE--STLEDFREKFGQRPDID 75
Query: 676 QLRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYAR 497
+LR+ + ++ S K+LV+F ++ + +L+QIMNKE L ++ILI+Q M S A
Sbjct: 76 RLRISSMHRNDLSNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSRLILIIQKPMTSQAM 135
Query: 496 KVADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLEND 317
K + S KVEIFQI+DLLVNITKHV PKHE+L EEK +LLKKY +E KQLP M + D
Sbjct: 136 KAVELLSFKVEIFQITDLLVNITKHVLKPKHELLNNEEKEKLLKKYNLEEKQLPRMSQKD 195
Query: 316 AISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
AI+RYYGL KGQ+VKV+Y I + VTYRCV
Sbjct: 196 AIARYYGLEKGQVVKVTY--SSEIIETHVTYRCV 227
>ref|XP_002297750.2| eukaryotic rpb5 RNA polymerase subunit family protein [Populus
trichocarpa] gi|550346648|gb|EEE82555.2| eukaryotic rpb5
RNA polymerase subunit family protein [Populus
trichocarpa]
Length = 233
Score = 215 bits (547), Expect = 3e-53
Identities = 114/213 (53%), Positives = 154/213 (72%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
C+ VD GS +S R Y++RRTV+EML DRGY V ++E L+R+L++FR+VFG P++D
Sbjct: 24 CLTDFVDEGSAQSYRYYISRRTVLEMLKDRGYDVLDSE--LNRSLTEFRSVFGNSPDLDS 81
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR S P +K LV+F EI+ N+ + QI+NKE L +ILILQ+KMN +A+K
Sbjct: 82 LRFSVSLRSIPHKKTLVMFLGTDEIKTANIRTVYGQILNKESLHGLILILQSKMNHFAKK 141
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
++ KVE+FQI+DLLVNITKHV P+ +ILTAE+K Q++ KY +E+KQLP MLE+DA
Sbjct: 142 ELEKFPFKVEVFQITDLLVNITKHVLQPQMDILTAEQKQQVMNKYKLEDKQLPRMLESDA 201
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I +YYGL KGQ VK++Y G I D +VTYRCV
Sbjct: 202 IVQYYGLQKGQTVKITY--SGEIVDHLVTYRCV 232
>ref|XP_010036349.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like
[Eucalyptus grandis] gi|629081447|gb|KCW47892.1|
hypothetical protein EUGRSUZ_K01636 [Eucalyptus grandis]
Length = 238
Score = 213 bits (543), Expect = 1e-52
Identities = 108/213 (50%), Positives = 155/213 (72%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
C++S VD GSV+S R Y+ARRT++EML DRGY + ++++++S L++FRA G+ P++D+
Sbjct: 29 CMSSYVDEGSVQSHRYYLARRTLLEMLRDRGYAIPSSDIDVS--LAEFRATHGQSPDIDR 86
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR+ S+PS+++LV F ++ ++ Y+ QI NK+ L +IL+LQ +M + A K
Sbjct: 87 LRISNSLRSDPSKRVLVYFCNPGPVKVTSIRYISGQIANKDGLSGLILVLQGEMTNQALK 146
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
D KV++FQI+DLLVNITKHV PKH +LT +EK +LLKKY+++ KQLP ML+NDA
Sbjct: 147 ALDLFPFKVQVFQITDLLVNITKHVLKPKHRVLTDQEKQRLLKKYSIQEKQLPRMLKNDA 206
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I+RYYGL KGQ+VKV+Y G I VTYRCV
Sbjct: 207 IARYYGLEKGQVVKVTYSGD--ITGTHVTYRCV 237
>ref|XP_010999617.1| PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Populus
euphratica]
Length = 233
Score = 213 bits (542), Expect = 1e-52
Identities = 113/213 (53%), Positives = 154/213 (72%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
C+ VD GS +S R Y++RRTV+EML DRGY V ++E L+R+L++FR+VFG P++D
Sbjct: 24 CLKDFVDEGSPQSYRYYISRRTVLEMLKDRGYDVLDSE--LNRSLTEFRSVFGNSPDLDS 81
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR SNP +K LV+F EI+ N+ + QI+NKE L +ILILQ+KMN +A+K
Sbjct: 82 LRFSVSLRSNPHKKTLVMFLGTDEIKTANIRTVYGQILNKECLHGLILILQSKMNHFAKK 141
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
++ KVE+FQI+DLLVNITKHV P+ +ILTAE+K Q++ KY +E+KQLP MLE+DA
Sbjct: 142 ELEKFPFKVEVFQITDLLVNITKHVLQPQMDILTAEQKQQVMNKYKLEDKQLPRMLESDA 201
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I +YYGL KGQ+VK++Y I +VTYRCV
Sbjct: 202 IVQYYGLQKGQMVKITY--SSEIVGHLVTYRCV 232
>ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
gi|568879109|ref|XP_006492520.1| PREDICTED: DNA-directed
RNA polymerase V subunit 5A-like isoform X1 [Citrus
sinensis] gi|557544341|gb|ESR55319.1| hypothetical
protein CICLE_v10021999mg [Citrus clementina]
gi|641824335|gb|KDO43677.1| hypothetical protein
CISIN_1g026620mg [Citrus sinensis]
Length = 236
Score = 213 bits (541), Expect = 2e-52
Identities = 111/213 (52%), Positives = 157/213 (73%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
C++ VD GS +S R Y++RRTV+EML DRGY VA +E+ LS + DFRA++G+ P+VD+
Sbjct: 27 CLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLS--VQDFRAIYGQDPDVDR 84
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR+ S+PS++ILV+F ++ + ++SQI+N++ L +ILILQN++ S A K
Sbjct: 85 LRISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIVNRDTLTGLILILQNQITSQATK 144
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
KVE+FQI+DLLVNITKHV PKH++LT +EK +LLKKY++E KQLP ML+ DA
Sbjct: 145 AVGLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKLLKKYSIEEKQLPRMLKKDA 204
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I++YYGL +GQ+VKV+Y G I ++ VTYRCV
Sbjct: 205 IAQYYGLERGQVVKVTY--SGEITESHVTYRCV 235
>ref|XP_012085995.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Jatropha
curcas] gi|643713372|gb|KDP26240.1| hypothetical protein
JCGZ_22486 [Jatropha curcas]
Length = 238
Score = 212 bits (540), Expect = 2e-52
Identities = 108/213 (50%), Positives = 157/213 (73%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
C++S D GS ES R Y++RRTV+EML DRGY + + ++ +S L +FRA+ G+ P++D+
Sbjct: 29 CLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINIS--LQEFRAIHGQDPDIDR 86
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
L++ A SNP++++LV+F ++ ++ + +QI+NK++L +ILILQN++ + A K
Sbjct: 87 LKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQALK 146
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
D KVE+FQI+DLLVNITKHV PKHE+LT EK +LLKKY++E KQLP +L+ DA
Sbjct: 147 AMDLFKFKVEMFQITDLLVNITKHVLKPKHEVLTEREKQKLLKKYSIEEKQLPRLLKKDA 206
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I+RYYGL KGQ+VKV+Y G I ++ VTYRCV
Sbjct: 207 IARYYGLEKGQVVKVTYSGD--ITESHVTYRCV 237
>ref|XP_010090903.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis] gi|587851030|gb|EXB41191.1| DNA-directed RNA
polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 231
Score = 212 bits (539), Expect = 3e-52
Identities = 107/213 (50%), Positives = 157/213 (73%)
Frame = -1
Query: 853 CIASMVDYGSVESKRLYMARRTVVEMLIDRGYMVANAEVELSRTLSDFRAVFGEKPEVDQ 674
C++S++D GSVES R +++R T++EML DRGY V ++++ LS L DFR ++G+ P+VD+
Sbjct: 22 CLSSLIDKGSVESHRYFLSRITLLEMLKDRGYSVPSSDINLS--LHDFRQIYGQIPDVDR 79
Query: 673 LRLIAGRASNPSRKILVLFSENIEIRKRNMVYLLSQIMNKEMLDKVILILQNKMNSYARK 494
LR S+PS++ILV+F E ++ ++ + QI+N+ L +IL+LQ++M + A+K
Sbjct: 80 LRFSVTHLSDPSKRILVIFCEPGVVKVTSVRGIAGQIVNRNTLTGLILVLQSQMTNQAQK 139
Query: 493 VADEHSVKVEIFQISDLLVNITKHVHMPKHEILTAEEKLQLLKKYAVENKQLPIMLENDA 314
+ KVEIFQI+DLL+NITKH+ PKH +LT +EK +LLKKY++E KQLP M +NDA
Sbjct: 140 AVELLPFKVEIFQITDLLINITKHLLRPKHRVLTDQEKQKLLKKYSIEVKQLPRMSKNDA 199
Query: 313 ISRYYGLVKGQIVKVSYGGGGVIPDAMVTYRCV 215
I+RYYGL KGQ+VK+ Y GG I D+ +TYRCV
Sbjct: 200 IARYYGLEKGQVVKIIYSGG--ITDSYITYRCV 230