BLASTX nr result
ID: Forsythia23_contig00020507
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia23_contig00020507 (1738 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_011083427.1| PREDICTED: RNA pseudouridine synthase 2, chl... 588 e-165 ref|XP_012829598.1| PREDICTED: RNA pseudouridine synthase 2, chl... 580 e-162 gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Erythra... 579 e-162 ref|XP_009798870.1| PREDICTED: RNA pseudouridine synthase 2, chl... 565 e-158 ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl... 563 e-157 emb|CDP07347.1| unnamed protein product [Coffea canephora] 562 e-157 ref|XP_004238386.1| PREDICTED: RNA pseudouridine synthase 2, chl... 561 e-157 ref|XP_010320443.1| PREDICTED: RNA pseudouridine synthase 2, chl... 560 e-156 ref|XP_009620048.1| PREDICTED: RNA pseudouridine synthase 2, chl... 554 e-155 ref|XP_010320444.1| PREDICTED: RNA pseudouridine synthase 2, chl... 543 e-151 ref|XP_003634352.1| PREDICTED: RNA pseudouridine synthase 2, chl... 541 e-151 ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chl... 538 e-150 ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chl... 536 e-149 ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chl... 536 e-149 ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl... 523 e-145 ref|XP_002301949.1| pseudouridine synthase family protein [Popul... 520 e-144 ref|XP_011034961.1| PREDICTED: RNA pseudouridine synthase 2, chl... 518 e-144 ref|XP_007017900.1| Pseudouridine synthase family protein isofor... 517 e-143 ref|XP_010533976.1| PREDICTED: RNA pseudouridine synthase 2, chl... 515 e-143 ref|XP_008445320.1| PREDICTED: RNA pseudouridine synthase 2, chl... 512 e-142 >ref|XP_011083427.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Sesamum indicum] Length = 445 Score = 588 bits (1516), Expect = e-165 Identities = 315/444 (70%), Positives = 357/444 (80%), Gaps = 3/444 (0%) Frame = -1 Query: 1690 MLSLNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSR-QVS 1514 MLSL++L + SAK L INPR+ +L ++ I TAC S S +A + ESD + S Sbjct: 1 MLSLHSLY---LNSAKPLPINPRNLSLRKI--ISTACAYSK--SYAAANSESDDFQGPFS 53 Query: 1513 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1334 GR N +SG+K+EE V LD GKLRLDSW+SSRING+SRARVQSSIRSGLVSVNG V+ KVS Sbjct: 54 GRPNNYSGVKIEEKVELDSGKLRLDSWISSRINGISRARVQSSIRSGLVSVNGHVIDKVS 113 Query: 1333 HVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAA--HMVVHPAPGNATGT 1160 HVVR+GD VNCTIAELQPLRAEAEDIPLDIVYEDEH+LVVNK +VVHPAPGNA+GT Sbjct: 114 HVVRDGDVVNCTIAELQPLRAEAEDIPLDIVYEDEHVLVVNKPVLQFVVVHPAPGNASGT 173 Query: 1159 LVNGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIV 980 LVNGIL HCRL TV NPE E S S DQ N GIGSGL E+ VRPGIV Sbjct: 174 LVNGILRHCRLSTVCL-NPEAQPEIVDDSEDEVSAFSVDQGENVGIGSGLYESSVRPGIV 232 Query: 979 HRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLN 800 HRLDKGTSGLLVVAKDE+SHA LAEQFK+ TIKRVYVSLTCGVPSP RI++PIGRD N Sbjct: 233 HRLDKGTSGLLVVAKDEHSHACLAEQFKERTIKRVYVSLTCGVPSPATGRIDVPIGRDAN 292 Query: 799 NRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVP 620 NR+RM A PG T KAR+A SRYKVIEILA GGC+LVEWRLETGRTHQIRAHAKYIGVP Sbjct: 293 NRIRMIAIPGSATHGKARHAVSRYKVIEILAGGGCALVEWRLETGRTHQIRAHAKYIGVP 352 Query: 619 LLGDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHF 440 LLGD+VYGGTKSMA+SLLQS+NP + HRQ+ QLV +++RPCLHA SLGFRHPN+GE+L F Sbjct: 353 LLGDDVYGGTKSMAMSLLQSKNPPTTHRQLLQLVERLDRPCLHAFSLGFRHPNSGEDLRF 412 Query: 439 SKLPPADFAEILSQLRDISTEKVT 368 S++PPADFAEIL +LRDI +K T Sbjct: 413 SQIPPADFAEILDRLRDIGAKKGT 436 >ref|XP_012829598.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Erythranthe guttatus] gi|604297299|gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Erythranthe guttata] Length = 422 Score = 580 bits (1495), Expect = e-162 Identities = 308/441 (69%), Positives = 351/441 (79%), Gaps = 1/441 (0%) Frame = -1 Query: 1690 MLSLNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSRQ-VS 1514 MLSL +L+W+SI K INPR+ A ++ +A P+SI A +SD S+ +S Sbjct: 1 MLSLQSLNWSSI---KPFPINPRNPAFWRLLSTSSAY----PDSIPADYSDSDDSQDSIS 53 Query: 1513 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1334 GR N FSG K+EETV LD KLR+DSW+SSRING+SRARVQSSIRSGLVSVNG V+SKVS Sbjct: 54 GRPNNFSGHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVS 113 Query: 1333 HVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLV 1154 HVVR+GD+VNCTIAELQPLRAE E+IPLDIVYED+HLLVVNK AHMVVHPAPGNA GTLV Sbjct: 114 HVVRDGDSVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLV 173 Query: 1153 NGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHR 974 NGILHHCRL TV F NPE L D D E+ VRPGIVHR Sbjct: 174 NGILHHCRLSTVCF-NPESLPDNID-----------DDDSIDEATVFPSESSVRPGIVHR 221 Query: 973 LDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNR 794 LDKGTSGLLVVAKDE+SH+HLAEQFKKHT+KRVYVSLTCGVPSPV R++IPIGRD NNR Sbjct: 222 LDKGTSGLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNR 281 Query: 793 LRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLL 614 +RM A PG KAR+A SRYKV+EILA GGC+LVEWRLETGRTHQIRAHAKY+G+PLL Sbjct: 282 IRMVAIPGSALHGKARHAVSRYKVVEILAGGGCALVEWRLETGRTHQIRAHAKYLGIPLL 341 Query: 613 GDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSK 434 GD+VYGGTK MALS LQS+N SS++ QI QLVAK+ERP LHALSLGFRHP+ GE+LHFS+ Sbjct: 342 GDDVYGGTKHMALSQLQSKNSSSYYGQIHQLVAKLERPSLHALSLGFRHPHKGEDLHFSQ 401 Query: 433 LPPADFAEILSQLRDISTEKV 371 +PP DFAEIL LR+IS+EKV Sbjct: 402 MPPFDFAEILDCLRNISSEKV 422 >gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Erythranthe guttata] Length = 432 Score = 579 bits (1492), Expect = e-162 Identities = 307/441 (69%), Positives = 351/441 (79%), Gaps = 1/441 (0%) Frame = -1 Query: 1690 MLSLNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSRQ-VS 1514 MLSL +L+W+SI K INPR+ A ++ +A P+SI A +SD S+ +S Sbjct: 1 MLSLQSLNWSSI---KPFPINPRNPAFWRLLSTSSAY----PDSIPADYSDSDDSQDSIS 53 Query: 1513 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1334 GR N FSG K+EETV LD KLR+DSW+SSRING+SRARVQSSIRSGLVSVNG V+SKVS Sbjct: 54 GRPNNFSGHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVS 113 Query: 1333 HVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLV 1154 HVVR+GD+VNCTIAELQPLRAE E+IPLDIVYED+HLLVVNK AHMVVHPAPGNA GTLV Sbjct: 114 HVVRDGDSVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLV 173 Query: 1153 NGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHR 974 NGILHHCRL TV F NPE L D D E+ VRPGIVHR Sbjct: 174 NGILHHCRLSTVCF-NPESLPDNID-----------DDDSIDEATVFPSESSVRPGIVHR 221 Query: 973 LDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNR 794 LDKGTSGLLVVAKDE+SH+HLAEQFKKHT+KRVYVSLTCGVPSPV R++IPIGRD NNR Sbjct: 222 LDKGTSGLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNR 281 Query: 793 LRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLL 614 +RM A PG KAR+A SRYKV+EILA GGC+LVEWRLETGRTHQIRAHAKY+G+PLL Sbjct: 282 IRMVAIPGSALHGKARHAVSRYKVVEILAGGGCALVEWRLETGRTHQIRAHAKYLGIPLL 341 Query: 613 GDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSK 434 GD+VYGGTK MALS LQS+N SS++ QI QLVAK+ERP LHALSLGFRHP+ GE+LHFS+ Sbjct: 342 GDDVYGGTKHMALSQLQSKNSSSYYGQIHQLVAKLERPSLHALSLGFRHPHKGEDLHFSQ 401 Query: 433 LPPADFAEILSQLRDISTEKV 371 +PP DFAEIL LR+IS+EK+ Sbjct: 402 MPPFDFAEILDCLRNISSEKM 422 >ref|XP_009798870.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana sylvestris] Length = 431 Score = 565 bits (1455), Expect = e-158 Identities = 295/440 (67%), Positives = 341/440 (77%) Frame = -1 Query: 1690 MLSLNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSRQVSG 1511 ML+LN+ S P NP+ + S+V + F P + D S+ ++G Sbjct: 1 MLALNSTSIFVPPQ------NPKPFSFSRVSSFIFRAFSKFPGDSDSDDSPSE----ITG 50 Query: 1510 RLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSH 1331 R + +SG+KLEETV + GKLRLDSW+SSRING+SRARVQSSIRSGLVSVNGRV KVSH Sbjct: 51 RRSNYSGVKLEETVDVKTGKLRLDSWVSSRINGISRARVQSSIRSGLVSVNGRVTDKVSH 110 Query: 1330 VVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVN 1151 V+ GD VNCTIA+L+PLRAE EDIPLDIVYED+H+LVVNK AHMVVHPAPGNATGTLV+ Sbjct: 111 TVKGGDKVNCTIADLKPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVS 170 Query: 1150 GILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRL 971 GILHHC LPTVSF EVL E + STDQ G S +CE VRPGIVHRL Sbjct: 171 GILHHCSLPTVSFPGEEVLSDVEDDSDDELNLFSTDQSPYGVDSSVVCEPSVRPGIVHRL 230 Query: 970 DKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRL 791 DKGTSGLLVVAK E S A+LAEQFKKHTIKRVYVS+TCGVP+ V RI+IPIGRD NNR+ Sbjct: 231 DKGTSGLLVVAKTEQSLANLAEQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRI 290 Query: 790 RMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLG 611 RM A PG + +AR AASRYKVIE LA GG +LVEWRLETGRTHQIRAHAKY+G+PLLG Sbjct: 291 RMIAIPGSHKGGRARNAASRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLG 350 Query: 610 DEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKL 431 DEVYGGTK+MALSLLQ + P H ++ QL++ IERPCLHAL+LGFRHP TGEN+HF++L Sbjct: 351 DEVYGGTKNMALSLLQPKTPPRSHGKLSQLISGIERPCLHALTLGFRHPYTGENIHFTRL 410 Query: 430 PPADFAEILSQLRDISTEKV 371 PPADFAE+LS+LR ISTEKV Sbjct: 411 PPADFAEVLSELRAISTEKV 430 >ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Solanum tuberosum] Length = 431 Score = 563 bits (1451), Expect = e-157 Identities = 291/441 (65%), Positives = 346/441 (78%), Gaps = 1/441 (0%) Frame = -1 Query: 1690 MLSLNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSR-QVS 1514 ML+LN S++ +P NP+ +LS+V + F P D +SD S ++ Sbjct: 1 MLALNTTSFSLLPQ------NPKPFSLSRVSSFICRAFTKFPG-----DSDSDDSPDEIP 49 Query: 1513 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1334 GR + +SG+KLEETV GKLRLDSW+SSRI+GVSRARVQSSIRSGLVSVNGRV KVS Sbjct: 50 GRRSNYSGVKLEETVDGKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVS 109 Query: 1333 HVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLV 1154 H+V+ GD V+CTIA+L+PLRAE EDIPLDIV+EDEH+LVVNK AHMVVHPAPGNATGTLV Sbjct: 110 HMVKGGDKVDCTIADLKPLRAEPEDIPLDIVFEDEHVLVVNKPAHMVVHPAPGNATGTLV 169 Query: 1153 NGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHR 974 +GILHHC LPT+SF EVL E + S ++ N S +CE+ VRPGIVHR Sbjct: 170 SGILHHCSLPTISFLGEEVLSDAEDASDDELNVFSGNRSPNYDDSSVMCESSVRPGIVHR 229 Query: 973 LDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNR 794 LDKGTSGLLVVAK+ENS A LAEQFKKHTIKRVYVS+TCGVP+ V R++IPIGRD NNR Sbjct: 230 LDKGTSGLLVVAKNENSLASLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNR 289 Query: 793 LRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLL 614 +RM+A PG K+R+A SRYKVIE LA GG +LVEWRLETGRTHQIRAHAKY+G+PL+ Sbjct: 290 IRMAAIPGTPKSGKSRHAVSRYKVIEKLARGGSALVEWRLETGRTHQIRAHAKYLGIPLM 349 Query: 613 GDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSK 434 GDEVYGGTK+MALSLLQ + P FH ++ QLV++I+RPCLHAL+LGFRHP TGEN+HF++ Sbjct: 350 GDEVYGGTKNMALSLLQPKTPPMFHGKLSQLVSQIDRPCLHALTLGFRHPFTGENIHFTR 409 Query: 433 LPPADFAEILSQLRDISTEKV 371 LPP DFAEILS LR I+TEKV Sbjct: 410 LPPPDFAEILSYLRAINTEKV 430 >emb|CDP07347.1| unnamed protein product [Coffea canephora] Length = 442 Score = 562 bits (1449), Expect = e-157 Identities = 291/441 (65%), Positives = 340/441 (77%), Gaps = 1/441 (0%) Frame = -1 Query: 1687 LSLNALSWTSIPSAKAL-SINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSRQVSG 1511 LSLN +SWTS+PS KAL +I P+ ++ + R+V C+ + Q P SD Sbjct: 4 LSLNTISWTSLPSTKALKNIIPKPLSVISLSRLVNVKACTTSAGGNPQ-PISDR------ 56 Query: 1510 RLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSH 1331 R FSG+KL+ETV + KLRLDSW+SSRI+G+SRARVQSSIRSGLVSVNGR+++KVSH Sbjct: 57 RTINFSGVKLQETVDVKSEKLRLDSWVSSRIHGISRARVQSSIRSGLVSVNGRIINKVSH 116 Query: 1330 VVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVN 1151 +VR GD VNCTI+ELQ LRAE EDIPLDIVYED+HLLVVNK AHMVVHPAPGN +GTLVN Sbjct: 117 MVRGGDKVNCTISELQQLRAEPEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNTSGTLVN 176 Query: 1150 GILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRL 971 GILHHC LP +S + EV EF NGG S EA +RPGIVHRL Sbjct: 177 GILHHCSLPMLSLASEEVHLEPEDASDDEFIAFPRAPKDNGGASSRTSEASIRPGIVHRL 236 Query: 970 DKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRL 791 DKGTSGLLVVAKDE+SH+HLAEQFK TIKRVYVSLTCGVPSPV R++IP+GRD NNR+ Sbjct: 237 DKGTSGLLVVAKDEHSHSHLAEQFKNRTIKRVYVSLTCGVPSPVSGRVDIPVGRDSNNRI 296 Query: 790 RMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLG 611 RM+ G QK R AASRY V+E+LA GG +LVEW+LETGRTHQIR HAKY+GVPL+G Sbjct: 297 RMAVFDGSTHSQKTRNAASRYSVVEVLAGGGSALVEWKLETGRTHQIRVHAKYMGVPLMG 356 Query: 610 DEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKL 431 DE+YGGTK MALSLLQ R PSSF ++QL+ K+ERPCLHALSLGF HP T EN+HFS++ Sbjct: 357 DELYGGTKGMALSLLQPRTPSSFRENLQQLICKLERPCLHALSLGFTHPYTLENMHFSQM 416 Query: 430 PPADFAEILSQLRDISTEKVT 368 PPADFAEIL+QLRDI EKV+ Sbjct: 417 PPADFAEILTQLRDIRAEKVS 437 >ref|XP_004238386.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Solanum lycopersicum] Length = 436 Score = 561 bits (1447), Expect = e-157 Identities = 291/442 (65%), Positives = 347/442 (78%), Gaps = 1/442 (0%) Frame = -1 Query: 1690 MLSLNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSR-QVS 1514 M++LN S++ +P NP+ +LS+V + F P D +SD S ++ Sbjct: 1 MVALNTTSFSLLPQ------NPKPISLSRVSSFICRAFTKFPG-----DSDSDDSPDEIP 49 Query: 1513 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1334 GR + +SG+KLEETV GKLRLDSW+SSRI+GVSRARVQSSIRSGLVSVNGRV KVS Sbjct: 50 GRRSNYSGVKLEETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVS 109 Query: 1333 HVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLV 1154 H+V+ GD V+CTIA+L+PLRAE EDIPLDIVYEDEH+LVVNK AHMVVHPAPGNATGTLV Sbjct: 110 HMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLV 169 Query: 1153 NGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHR 974 +GILHHC LPTVSF EVL E + S ++ N S +CE+ VRPGIVHR Sbjct: 170 SGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHR 229 Query: 973 LDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNR 794 LDKGTSGLLVVAK+E+S A LAEQFKKHTIKRVYVS+TCGVP+ V R++IPIGRD NNR Sbjct: 230 LDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNR 289 Query: 793 LRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLL 614 +RM+A PG K+R+A SRYKVIE LA GG +LVEWRLETGRTHQIRAHAK++G+PL+ Sbjct: 290 IRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIPLM 349 Query: 613 GDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSK 434 GDEVYGGTK+MALSLLQ + P FH ++ QLV++I+RPCLHAL+LGFRHP TGEN+HF++ Sbjct: 350 GDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTR 409 Query: 433 LPPADFAEILSQLRDISTEKVT 368 LPP DFAEILS+LR I TEKVT Sbjct: 410 LPPPDFAEILSELRAIKTEKVT 431 >ref|XP_010320443.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Solanum lycopersicum] Length = 431 Score = 560 bits (1442), Expect = e-156 Identities = 290/441 (65%), Positives = 346/441 (78%), Gaps = 1/441 (0%) Frame = -1 Query: 1690 MLSLNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSR-QVS 1514 M++LN S++ +P NP+ +LS+V + F P D +SD S ++ Sbjct: 1 MVALNTTSFSLLPQ------NPKPISLSRVSSFICRAFTKFPG-----DSDSDDSPDEIP 49 Query: 1513 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1334 GR + +SG+KLEETV GKLRLDSW+SSRI+GVSRARVQSSIRSGLVSVNGRV KVS Sbjct: 50 GRRSNYSGVKLEETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVS 109 Query: 1333 HVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLV 1154 H+V+ GD V+CTIA+L+PLRAE EDIPLDIVYEDEH+LVVNK AHMVVHPAPGNATGTLV Sbjct: 110 HMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLV 169 Query: 1153 NGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHR 974 +GILHHC LPTVSF EVL E + S ++ N S +CE+ VRPGIVHR Sbjct: 170 SGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHR 229 Query: 973 LDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNR 794 LDKGTSGLLVVAK+E+S A LAEQFKKHTIKRVYVS+TCGVP+ V R++IPIGRD NNR Sbjct: 230 LDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNR 289 Query: 793 LRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLL 614 +RM+A PG K+R+A SRYKVIE LA GG +LVEWRLETGRTHQIRAHAK++G+PL+ Sbjct: 290 IRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIPLM 349 Query: 613 GDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSK 434 GDEVYGGTK+MALSLLQ + P FH ++ QLV++I+RPCLHAL+LGFRHP TGEN+HF++ Sbjct: 350 GDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTR 409 Query: 433 LPPADFAEILSQLRDISTEKV 371 LPP DFAEILS+LR I TEKV Sbjct: 410 LPPPDFAEILSELRAIKTEKV 430 >ref|XP_009620048.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana tomentosiformis] Length = 431 Score = 554 bits (1427), Expect = e-155 Identities = 290/441 (65%), Positives = 338/441 (76%), Gaps = 1/441 (0%) Frame = -1 Query: 1690 MLSLNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSR-QVS 1514 ML+LN+ S P NP+ + S+V + F P D +SD S ++ Sbjct: 1 MLALNSTSIFVHPQ------NPKPFSFSRVSSFIIRAFSKFPG-----DSDSDDSPDEIQ 49 Query: 1513 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1334 R + +SG+KLEETV + GKLRLDSW+SSRI+G+SRARVQSSIRSGLVSVNGRV KVS Sbjct: 50 SRKSNYSGVKLEETVDIKTGKLRLDSWVSSRIDGISRARVQSSIRSGLVSVNGRVTDKVS 109 Query: 1333 HVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLV 1154 H V+ GD VNCTIA+L+PLRAE EDIPLDIVYED+H+LVVNK AHMVVHPAPGN TGTLV Sbjct: 110 HTVKGGDKVNCTIADLKPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNVTGTLV 169 Query: 1153 NGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHR 974 +GILHHC LPT+SF EVL E + S DQ NG S + E +RPGIVHR Sbjct: 170 SGILHHCSLPTISFPGEEVLSDVEDASGDELNMFSADQSPNGVDASRMYEPSIRPGIVHR 229 Query: 973 LDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNR 794 LDKGTSGLLVVAK E S A+LAEQFKKHTIKRVYVS+TCGVP+ V RI+IPIGRD NNR Sbjct: 230 LDKGTSGLLVVAKTEQSLANLAEQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNR 289 Query: 793 LRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLL 614 +RM A PG + +AR AASRYKVIE LA GG +LVEWRLETGRTHQIRAHAKY+G+PLL Sbjct: 290 IRMVAIPGSHKGGRARNAASRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLL 349 Query: 613 GDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSK 434 GDEVYGGTK+MALSLLQ + P H + QL++ IERPCLHAL+LGFRHP TGEN+HF++ Sbjct: 350 GDEVYGGTKNMALSLLQPKTPPRSHGNLSQLISGIERPCLHALTLGFRHPYTGENIHFTR 409 Query: 433 LPPADFAEILSQLRDISTEKV 371 LPPADFAE+L++LR ISTEKV Sbjct: 410 LPPADFAEVLTELRAISTEKV 430 >ref|XP_010320444.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3 [Solanum lycopersicum] Length = 430 Score = 543 bits (1400), Expect = e-151 Identities = 285/442 (64%), Positives = 341/442 (77%), Gaps = 1/442 (0%) Frame = -1 Query: 1690 MLSLNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSR-QVS 1514 M++LN S++ +P NP+ +LS+V + F P D +SD S ++ Sbjct: 1 MVALNTTSFSLLPQ------NPKPISLSRVSSFICRAFTKFPG-----DSDSDDSPDEIP 49 Query: 1513 GRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVS 1334 GR + +SG+KLEETV GKLRLDSW+SSRI+GVSRARVQSSIRSGLVSVNGRV KVS Sbjct: 50 GRRSNYSGVKLEETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVS 109 Query: 1333 HVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLV 1154 H+V+ GD V+CTIA+L+PLRAE EDIPLDIVYEDEH+LVVNK AHMVVHPAPGNATGTLV Sbjct: 110 HMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLV 169 Query: 1153 NGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHR 974 +GILHHC LPTVSF EVL E + S ++ N S +CE+ VRPGIVHR Sbjct: 170 SGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHR 229 Query: 973 LDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNR 794 LDKGTSGLLVVAK+E+S A LAEQFKKHTIKRVYVS+TCGVP+ V R++IPIGRD NNR Sbjct: 230 LDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNR 289 Query: 793 LRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLL 614 +RM+A PG K+R+A SRYKVIE LA GG +LVEWRLETGRTHQ ++G+PL+ Sbjct: 290 IRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQ------HLGIPLM 343 Query: 613 GDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSK 434 GDEVYGGTK+MALSLLQ + P FH ++ QLV++I+RPCLHAL+LGFRHP TGEN+HF++ Sbjct: 344 GDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTR 403 Query: 433 LPPADFAEILSQLRDISTEKVT 368 LPP DFAEILS+LR I TEKVT Sbjct: 404 LPPPDFAEILSELRAIKTEKVT 425 >ref|XP_003634352.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Vitis vinifera] gi|302141717|emb|CBI18920.3| unnamed protein product [Vitis vinifera] Length = 433 Score = 541 bits (1395), Expect = e-151 Identities = 288/446 (64%), Positives = 340/446 (76%), Gaps = 7/446 (1%) Frame = -1 Query: 1690 MLSLNALSWTSIP--SAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSRQV 1517 + SLN+ S+ SI S AL + S+V RI+ AC S + + V Sbjct: 2 IFSLNSASFFSISHTSQSALLFPRNPKSCSRVFRILRACSNSTDEPLVS----------V 51 Query: 1516 SGRLNKFSGIKLEETV---GLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVV 1346 SGR ++G++LEETV D GKLRLDSW+SSRI G+SRARVQSSIRSGLVSVN R+V Sbjct: 52 SGRRTNYAGVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIV 111 Query: 1345 SKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNAT 1166 KVSHV+R GD VNCTI+ELQPLRAE EDIPLDIVYEDEH+LVVNK AHMVVHPAPGNA+ Sbjct: 112 DKVSHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNAS 171 Query: 1165 GTLVNGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQ--DYNGGIGSGLCEAYVR 992 GTLVNGILHHC LPTV+ N + E +S D+ + G G CE +R Sbjct: 172 GTLVNGILHHCSLPTVALPNRD----------SEEDDISDDEFNSFAAGQNCGTCETNIR 221 Query: 991 PGIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIG 812 PGIVHRLDKGTSGLLVVAKDE+SHAHL+EQFK H+I RVY+SLT GVP+P+ R+EIP+G Sbjct: 222 PGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVG 281 Query: 811 RDLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKY 632 RD NNR+RM+A PG + +AR+AASRYKVIEILA GG +LVEWRLETGRTHQIRAHAKY Sbjct: 282 RDPNNRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKY 341 Query: 631 IGVPLLGDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGE 452 +G+PLLGDEVYGGTK+MALSLL+ R PSS H Q+ QLV++++RPCLHA++LGF HP TG+ Sbjct: 342 LGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGK 401 Query: 451 NLHFSKLPPADFAEILSQLRDISTEK 374 N+HFS PP DFAEILS LR ISTEK Sbjct: 402 NVHFSCQPPEDFAEILSWLRKISTEK 427 >ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Nelumbo nucifera] Length = 471 Score = 538 bits (1385), Expect = e-150 Identities = 276/436 (63%), Positives = 333/436 (76%), Gaps = 3/436 (0%) Frame = -1 Query: 1669 SWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSRQVS---GRLNK 1499 S++S+PSA +L + L + R T+ F N + ES Q S R Sbjct: 5 SYSSVPSANSLYNSSSFYLLHRSPRASTSRFFRVLNCSFSSTGESASDYQSSEPQNRRGN 64 Query: 1498 FSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSHVVRE 1319 F+G+ LE+TV + K R+DSW+SSRI G+SRARVQSSI+SGLVSVNGR++ KVSHV+R Sbjct: 65 FAGVCLEDTVEISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDKVSHVIRA 124 Query: 1318 GDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVNGILH 1139 GD VNCTI ELQPLRAE EDIPLDIVYEDE +LVVNK AHMVVHPAPGNA GTLVNGILH Sbjct: 125 GDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGTLVNGILH 184 Query: 1138 HCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRLDKGT 959 HC LP V+ N +VL E S+ Q + S +CE VRPGIVHRLDKGT Sbjct: 185 HCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIVHRLDKGT 244 Query: 958 SGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRLRMSA 779 SGLLVVAKDE+SHAHL+EQFK HTI R+Y+SLTCGVPS RIE+PIGRDL+NR+RM+A Sbjct: 245 SGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLSNRIRMAA 304 Query: 778 APGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLGDEVY 599 P N+ ++AR+AASRY+V+E+LA GG +LVEWRLETGRTHQIRAHAKY+G+PLLGDEVY Sbjct: 305 VPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY 364 Query: 598 GGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKLPPAD 419 GGT++MALSLL++R+ SSFH + QLV+K++RPCLHA +LGF+HP+TGEN+ FS PPAD Sbjct: 365 GGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQFSCPPPAD 424 Query: 418 FAEILSQLRDISTEKV 371 F E+LSQLR I EKV Sbjct: 425 FTEVLSQLRSIGIEKV 440 >ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3 [Nelumbo nucifera] Length = 443 Score = 536 bits (1381), Expect = e-149 Identities = 275/435 (63%), Positives = 332/435 (76%), Gaps = 3/435 (0%) Frame = -1 Query: 1669 SWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSRQVS---GRLNK 1499 S++S+PSA +L + L + R T+ F N + ES Q S R Sbjct: 5 SYSSVPSANSLYNSSSFYLLHRSPRASTSRFFRVLNCSFSSTGESASDYQSSEPQNRRGN 64 Query: 1498 FSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSHVVRE 1319 F+G+ LE+TV + K R+DSW+SSRI G+SRARVQSSI+SGLVSVNGR++ KVSHV+R Sbjct: 65 FAGVCLEDTVEISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDKVSHVIRA 124 Query: 1318 GDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVNGILH 1139 GD VNCTI ELQPLRAE EDIPLDIVYEDE +LVVNK AHMVVHPAPGNA GTLVNGILH Sbjct: 125 GDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGTLVNGILH 184 Query: 1138 HCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRLDKGT 959 HC LP V+ N +VL E S+ Q + S +CE VRPGIVHRLDKGT Sbjct: 185 HCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIVHRLDKGT 244 Query: 958 SGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRLRMSA 779 SGLLVVAKDE+SHAHL+EQFK HTI R+Y+SLTCGVPS RIE+PIGRDL+NR+RM+A Sbjct: 245 SGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLSNRIRMAA 304 Query: 778 APGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLGDEVY 599 P N+ ++AR+AASRY+V+E+LA GG +LVEWRLETGRTHQIRAHAKY+G+PLLGDEVY Sbjct: 305 VPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY 364 Query: 598 GGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKLPPAD 419 GGT++MALSLL++R+ SSFH + QLV+K++RPCLHA +LGF+HP+TGEN+ FS PPAD Sbjct: 365 GGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQFSCPPPAD 424 Query: 418 FAEILSQLRDISTEK 374 F E+LSQLR I EK Sbjct: 425 FTEVLSQLRSIGIEK 439 >ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Nelumbo nucifera] Length = 453 Score = 536 bits (1381), Expect = e-149 Identities = 275/435 (63%), Positives = 332/435 (76%), Gaps = 3/435 (0%) Frame = -1 Query: 1669 SWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSRQVS---GRLNK 1499 S++S+PSA +L + L + R T+ F N + ES Q S R Sbjct: 5 SYSSVPSANSLYNSSSFYLLHRSPRASTSRFFRVLNCSFSSTGESASDYQSSEPQNRRGN 64 Query: 1498 FSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSHVVRE 1319 F+G+ LE+TV + K R+DSW+SSRI G+SRARVQSSI+SGLVSVNGR++ KVSHV+R Sbjct: 65 FAGVCLEDTVEISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDKVSHVIRA 124 Query: 1318 GDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVNGILH 1139 GD VNCTI ELQPLRAE EDIPLDIVYEDE +LVVNK AHMVVHPAPGNA GTLVNGILH Sbjct: 125 GDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGTLVNGILH 184 Query: 1138 HCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRLDKGT 959 HC LP V+ N +VL E S+ Q + S +CE VRPGIVHRLDKGT Sbjct: 185 HCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIVHRLDKGT 244 Query: 958 SGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRLRMSA 779 SGLLVVAKDE+SHAHL+EQFK HTI R+Y+SLTCGVPS RIE+PIGRDL+NR+RM+A Sbjct: 245 SGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLSNRIRMAA 304 Query: 778 APGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLGDEVY 599 P N+ ++AR+AASRY+V+E+LA GG +LVEWRLETGRTHQIRAHAKY+G+PLLGDEVY Sbjct: 305 VPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVY 364 Query: 598 GGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKLPPAD 419 GGT++MALSLL++R+ SSFH + QLV+K++RPCLHA +LGF+HP+TGEN+ FS PPAD Sbjct: 365 GGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQFSCPPPAD 424 Query: 418 FAEILSQLRDISTEK 374 F E+LSQLR I EK Sbjct: 425 FTEVLSQLRSIGIEK 439 >ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus sinensis] Length = 421 Score = 523 bits (1348), Expect = e-145 Identities = 275/441 (62%), Positives = 334/441 (75%) Frame = -1 Query: 1690 MLSLNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSRQVSG 1511 MLSLN+ SW S K L +P V +I+ A S+ + + ++P Sbjct: 3 MLSLNSASWGSASCTKGLQFSPTKIPFG-VFKILRARCSSSSSGGNNREP---------- 51 Query: 1510 RLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSH 1331 + ++G++LEETV GKLRLD+W+SSRI+G+SRARVQSSIRSGLVS+NG+VVSKVSH Sbjct: 52 -IANYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSINGQVVSKVSH 110 Query: 1330 VVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVN 1151 V+ GD VNCTI+ELQPLRAEAEDIPLDIVYED+++LVVNK AHMVVHPAPGNATGTLVN Sbjct: 111 NVKGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVN 170 Query: 1150 GILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRL 971 GILHHC LPT++ N E +S D++++ I A +RPGIVHRL Sbjct: 171 GILHHCSLPTLASSNQEAFSDA--------EDISDDEEFSSSISG----ASIRPGIVHRL 218 Query: 970 DKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRL 791 DKGTSGLLVVAKDE+SHAHL+EQFK HTI+RVY+SLT GVPS RIE+PI RD NNR+ Sbjct: 219 DKGTSGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRI 278 Query: 790 RMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLG 611 RM+A PG N +AR+AASRYKVIEILA GG +LVEWRLETGRTHQIRAHAKY+G+PLLG Sbjct: 279 RMAAIPGSNKHGQARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYMGIPLLG 338 Query: 610 DEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKL 431 DEVYGGTK+MA SLLQ R H ++ +LV+ ++RPCLHA++LGF HP+T E + FS Sbjct: 339 DEVYGGTKNMAKSLLQPRTAPGSHGKVLKLVSGLQRPCLHAVALGFTHPHTREKIQFSCP 398 Query: 430 PPADFAEILSQLRDISTEKVT 368 PPADFAEILSQLR+I TEK++ Sbjct: 399 PPADFAEILSQLREIGTEKLS 419 >ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa] gi|222843675|gb|EEE81222.1| pseudouridine synthase family protein [Populus trichocarpa] Length = 444 Score = 520 bits (1339), Expect = e-144 Identities = 285/444 (64%), Positives = 340/444 (76%) Frame = -1 Query: 1699 SQEMLSLNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSRQ 1520 S+ MLS++++S S PS LS P S L V +S S ++P S+ Q Sbjct: 27 SKRMLSISSVSRCSAPSF-FLSQKPTASRLLTV------------HSSSTREPNSN---Q 70 Query: 1519 VSGRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSK 1340 G+ +SG+KLEE+V GK RLDSW+SSRI+G+SRARVQSSI+SGLVSVNG+V+ K Sbjct: 71 NPGQRINYSGVKLEESVDSKSGKSRLDSWISSRISGISRARVQSSIKSGLVSVNGKVIDK 130 Query: 1339 VSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGT 1160 VSH V+ GD VNC I+ELQPLRAE E+IPLDIVYEDE++LVVNK AHMVVHPAPGNATGT Sbjct: 131 VSHNVKAGDKVNCVISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMVVHPAPGNATGT 190 Query: 1159 LVNGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIV 980 LVNGILHHC LPTVS + EVL +S D D G+ S A VRPGIV Sbjct: 191 LVNGILHHCSLPTVS--SQEVLSGA--------EDVSDDDD--EGLCSSSYAASVRPGIV 238 Query: 979 HRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLN 800 HRLDKGTSGLLVVAKDE+SHAHL+EQFK HTIKRVYVSLTCGVP+P+ RI++PIGRD++ Sbjct: 239 HRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIKRVYVSLTCGVPAPMAGRIDVPIGRDVS 298 Query: 799 NRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVP 620 NR+RM+A N R +AR+AASRYKVIEILA GG +LVEWRLETGRTHQIRAHAKYIG+P Sbjct: 299 NRIRMAAIVEPN-RGQARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYIGIP 357 Query: 619 LLGDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHF 440 LLGDEVYGGT++MALSLL+SR S HRQ+ ++ +ERPCLHAL+LGF HP TG+ +HF Sbjct: 358 LLGDEVYGGTQNMALSLLRSRTQPSCHRQLSLSLSGLERPCLHALALGFTHPCTGKEIHF 417 Query: 439 SKLPPADFAEILSQLRDISTEKVT 368 S PP DF EILSQLR++ TEK++ Sbjct: 418 SCPPPPDFTEILSQLREMGTEKLS 441 >ref|XP_011034961.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Populus euphratica] Length = 416 Score = 518 bits (1335), Expect = e-144 Identities = 282/439 (64%), Positives = 335/439 (76%) Frame = -1 Query: 1690 MLSLNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSRQVSG 1511 MLS++++S S PS LS P S L V +S S ++P S+ Q G Sbjct: 1 MLSISSVSRCSAPSF-FLSQKPTASRLLTV------------HSSSTREPNSN---QNPG 44 Query: 1510 RLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSH 1331 +SG+KLEE+V GK RLDSW+SSRI+G+SRARVQSSI+SGLVSVNG+V+ KVSH Sbjct: 45 ERINYSGVKLEESVDSKSGKSRLDSWISSRISGISRARVQSSIKSGLVSVNGKVIDKVSH 104 Query: 1330 VVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVN 1151 V+ GD VNC I+ELQPLRAE E+IPLDIVYEDE++LVVNK AHMVVHPAPGNATGTLVN Sbjct: 105 NVKAGDKVNCVISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMVVHPAPGNATGTLVN 164 Query: 1150 GILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRL 971 GILHHC LPTVS + EVL +D D + G+ S A VRPGIVHRL Sbjct: 165 GILHHCSLPTVS--SQEVLSGAEDV---------SDDDDDEGLCSSSHAASVRPGIVHRL 213 Query: 970 DKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRL 791 DKGTSGLLVVAKDE+SHAHL+EQFK HTIKRVYVSLTCGVP+P+ RI++PIGRD++NR+ Sbjct: 214 DKGTSGLLVVAKDEHSHAHLSEQFKLHTIKRVYVSLTCGVPAPMAGRIDVPIGRDVSNRI 273 Query: 790 RMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLG 611 RM+A N R +AR+AASRYKVIEILA GG +LVEWRLETGRTHQIRAHAKYIG+PLLG Sbjct: 274 RMAAIAEPN-RGQARHAASRYKVIEILARGGSALVEWRLETGRTHQIRAHAKYIGIPLLG 332 Query: 610 DEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKL 431 DEVYGGT++MALSLL+SR S HRQ+ ++ +ERPCLHAL+LGF HP TG+ +HF+ Sbjct: 333 DEVYGGTQNMALSLLRSRTQPSCHRQLSLSLSGLERPCLHALALGFTHPCTGKEIHFACP 392 Query: 430 PPADFAEILSQLRDISTEK 374 PP DF EILSQLR++ TEK Sbjct: 393 PPPDFTEILSQLREMGTEK 411 >ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] gi|508723228|gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] Length = 433 Score = 517 bits (1332), Expect = e-143 Identities = 272/439 (61%), Positives = 322/439 (73%), Gaps = 1/439 (0%) Frame = -1 Query: 1681 LNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQDPESDGSRQVSGRLN 1502 +++ S PS KA I+P LS + S A+ ++ Sbjct: 2 VSSYSCCPFPSTKAFQISPSFVFLSPRYPKLLPFTLSGILRARARPSSGCAAKTQEPIRT 61 Query: 1501 KFSGIKLEETV-GLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVSKVSHVV 1325 ++G++LEETV G GKLRLDSW+SSRI G+SRARVQSSI+SGLV+VNGRVV KVSH + Sbjct: 62 SYTGVQLEETVDGTKQGKLRLDSWISSRIQGISRARVQSSIKSGLVTVNGRVVDKVSHGL 121 Query: 1324 REGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATGTLVNGI 1145 R GD VNC I+ELQPLRAE EDIPLDIVYED+H+LVVNK HMVVHPAPGNATGTLVNGI Sbjct: 122 RHGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAPGNATGTLVNGI 181 Query: 1144 LHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGIVHRLDK 965 LHHC LPTV+ EVL T D G A VRPGIVHRLDK Sbjct: 182 LHHCSLPTVALSEKEVLS----------DTEDVSDDDEGFCYGASAAASVRPGIVHRLDK 231 Query: 964 GTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDLNNRLRM 785 GTSGLLVVAKDE+SH+HL+EQFK+HTI+RVY+SLTCGVPSP R++I IGRD NNR+RM Sbjct: 232 GTSGLLVVAKDEHSHSHLSEQFKQHTIQRVYISLTCGVPSPSAGRVDISIGRDSNNRVRM 291 Query: 784 SAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGVPLLGDE 605 A PGLN +AR+AASRYKVIE+LA GG +L++WRLETGRTHQIRAHAKY+G+PLLGDE Sbjct: 292 IAVPGLNHHGRARHAASRYKVIEVLAGGGSALIQWRLETGRTHQIRAHAKYMGIPLLGDE 351 Query: 604 VYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLHFSKLPP 425 VYGGTKSMALSLL+ R P +++ Q+ +LV+++ERP LHAL LGF HP++ E +HFS PP Sbjct: 352 VYGGTKSMALSLLRPRTPPNYNDQLSRLVSRLERPYLHALVLGFEHPHSREMMHFSCQPP 411 Query: 424 ADFAEILSQLRDISTEKVT 368 DFAEILS LR I TEK T Sbjct: 412 PDFAEILSDLRKIGTEKPT 430 >ref|XP_010533976.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Tarenaya hassleriana] Length = 435 Score = 515 bits (1326), Expect = e-143 Identities = 278/445 (62%), Positives = 336/445 (75%), Gaps = 4/445 (0%) Frame = -1 Query: 1690 MLSLNALSWTSIPSAKALSINPRHSALSQVQRIVTACFCSNPNSISAQD--PESDGSR-- 1523 ML+L+ +S S + K+L + S+ S ++ + F + + P+SD R Sbjct: 1 MLTLSPVSNLSSFTGKSLRSSSSSSSSSSSLSVLFSFFPRVSRFVRSSSGIPDSDRVRRP 60 Query: 1522 QVSGRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRVVS 1343 ++S R + +G+K +ETV + GK+RLDSW+SSR++GVSRARVQSSIR GLV VNGRVV Sbjct: 61 EISPRASN-AGVKFQETVDVATGKIRLDSWISSRVHGVSRARVQSSIRLGLVCVNGRVVD 119 Query: 1342 KVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNATG 1163 KVSH V+ GD V+CTI+ELQPL+AE ED+PLDIVYED H+LVVNK AHMVVHPAPGN G Sbjct: 120 KVSHNVKAGDMVSCTISELQPLKAEPEDMPLDIVYEDNHVLVVNKPAHMVVHPAPGNPNG 179 Query: 1162 TLVNGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRPGI 983 TLVNGILHHC LP V++ + EV + S D++ + S A VRPGI Sbjct: 180 TLVNGILHHCSLPIVAYSDTEV--------DPDEEDFSEDEET---MSSSAYSASVRPGI 228 Query: 982 VHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGRDL 803 VHRLDKGTSGLLVVAKDE+SHAHLAEQFK+HTI+RVYVSLTCGVPSP RI IPIGRDL Sbjct: 229 VHRLDKGTSGLLVVAKDEHSHAHLAEQFKQHTIERVYVSLTCGVPSPSHGRIVIPIGRDL 288 Query: 802 NNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYIGV 623 NNR+RM+A PGL+ R +AR+AASRYKVIEILA GG +LVEWRLETGRTHQIRAHAKY+GV Sbjct: 289 NNRIRMAAIPGLSNRGRARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYVGV 348 Query: 622 PLLGDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGENLH 443 PLLGDEVYG TKSMALSLLQ R + H QI +LV++++RPCLHAL LGF+HP TGE++ Sbjct: 349 PLLGDEVYGATKSMALSLLQKRASRNDHGQILELVSRLDRPCLHALVLGFKHPCTGEDVK 408 Query: 442 FSKLPPADFAEILSQLRDISTEKVT 368 FS PP DFAE L LR + TEKV+ Sbjct: 409 FSCPPPPDFAETLGMLRKLGTEKVS 433 >ref|XP_008445320.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Cucumis melo] Length = 429 Score = 512 bits (1318), Expect = e-142 Identities = 262/387 (67%), Positives = 310/387 (80%) Frame = -1 Query: 1528 SRQVSGRLNKFSGIKLEETVGLDFGKLRLDSWLSSRINGVSRARVQSSIRSGLVSVNGRV 1349 S S R+ ++G +LEETV ++ GK+RLDSW+SSRING+SRARVQSSIR+GLVSVNGRV Sbjct: 50 SEAQSERIANYAGTRLEETVDINPGKVRLDSWISSRINGISRARVQSSIRAGLVSVNGRV 109 Query: 1348 VSKVSHVVREGDAVNCTIAELQPLRAEAEDIPLDIVYEDEHLLVVNKAAHMVVHPAPGNA 1169 + KVSH V+ GD +NCTI+ELQPLRAE EDI LDIVYEDEH+LVVNK AHMVVHPAPGNA Sbjct: 110 IDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNA 169 Query: 1168 TGTLVNGILHHCRLPTVSFFNPEVLXXXXXXXXXEFSTLSTDQDYNGGIGSGLCEAYVRP 989 TGTLVN IL+HC LP VS E S +S D+ + + S + EA +RP Sbjct: 170 TGTLVNAILNHCSLPMVSTSTGE---------HQSDSDVSDDEFSSIEVFSRVSEAPIRP 220 Query: 988 GIVHRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSLTCGVPSPVCERIEIPIGR 809 GIVHRLDKGTSGLLVVAKDE+SHAHL+ QFK+H+I+RVY+SLTCGVP RIEIPI R Sbjct: 221 GIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEIPICR 280 Query: 808 DLNNRLRMSAAPGLNTRQKARYAASRYKVIEILAHGGCSLVEWRLETGRTHQIRAHAKYI 629 D NNR+RM+A G A++AASRY V+EILA GG SLVEWRLETGRTHQIRAHAKY+ Sbjct: 281 DPNNRIRMTATHGTKNNPHAKHAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYM 340 Query: 628 GVPLLGDEVYGGTKSMALSLLQSRNPSSFHRQIEQLVAKIERPCLHALSLGFRHPNTGEN 449 G+PLLGDEVYGGTKSMA+SLL++R S+ H Q+ QLV+ +ERPCLHAL+LGF HP+TG+N Sbjct: 341 GIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKN 400 Query: 448 LHFSKLPPADFAEILSQLRDISTEKVT 368 + FS PP DFAEILSQLR+I T+KVT Sbjct: 401 IRFSCPPPTDFAEILSQLREIGTKKVT 427